Oncorhynchus mykiss (rainbow trout): 110489061
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Entry
110489061 CDS
T07259
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110489061 (si:ch211-114c17.1)
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110489061 (si:ch211-114c17.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
HrpB1_HrpK
TPR_MalT
UTP6_C
TPR_21
Motif
Other DBs
NCBI-GeneID:
110489061
NCBI-ProteinID:
XP_021417291
Ensembl:
ENSOMYG00000008791
UniProt:
A0A8C7P8Y3
LinkDB
All DBs
Position
14:complement(27141476..27153482)
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AA seq
726 aa
AA seq
DB search
MAAEGSDSEDLNTNGLMEAPSALEAMEAVQLPTEKEEASEENGGGGASEAPEAAAATSYN
MPLAENEEEEDGEFPADFDRLWKLAHDNPQDFSSWTDLLQYCEQESHMTASRRALVAFLA
RYPLCYGYWKKFADLERRAGYTNKAQEVCVQGLKAIPLSVDLWIHYINLLLGTLNMNLPE
SSQRIRSAFEEAVTAAGLDFHSDRLWELYIEWEKEQGDMKAATGVYDRVLRVPTQLYSSH
YEKFKTHLNAHAPKDVLSAVEYEGLLEESKQSHKTEKSELAEGEEELPPGEEKEPTEEEL
IPKMRELLLARREKVYQDLEGEVRKRWNFEEAIKRPYFHVKPLDRTQLRAWHSYLDWELT
ELEGGGEKEVKTETEPEAMEGQEEEEKEGSKSSEIVAGGDRRVRILFERCLIACALYEEF
WTKYVQYLEPQSLDEARGVFRRACEIHLAHKHTMHLQWATFEERHGDLTEARRVLEALET
SVPGLAMVRLRRAGLERRAGRLDESEALLRDAVAQAKETPYLHAFYSIKLARLLLKLCKN
PSKARGVLQEALEISPDDGKLHLNLLELEVSGDPRGSAEGVQQCVARALAAPLSPQTKIL
FSQRGLQYAEDYGTSVQSVLTVYEEHQKLLKELGNKKRVAENGDSEDPEKMSKGEDGSAV
PAPPQAPPTMPHVPMTTPPPPMMGGDMSAVHAGYGGYGSWHQQPQYGGYGGYQQAWNYNQ
GYYPPS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaggctcggattcagaagacctgaacaccaacgggctaatggaggctcct
tcagctctggaagccatggaggctgtccaacttccaacagagaaggaagaggcatcagag
gagaatggtggaggaggagcctctgaggctccagaagcagcagctgcgacatcatacaac
atgcctctggcagagaatgaggaggaagaagacggagagttccctgcggactttgaccga
ctctggaagctggcccatgacaatccacaggacttctctagctggactgacctactgcag
tactgtgagcaagagagtcacatgacagcgtcacgtcgggcgctggtagcctttctggca
cggtacccactgtgctacggatactggaagaagtttgccgacctggagcgacgtgctggc
tacaccaacaaagctcaggaggtgtgtgttcagggtctgaaggccattcccctgagtgta
gatctgtggatccactacattaacctgctactgggcacgctcaacatgaacctgccagag
tcctctcagcgcattcgcagtgcatttgaggaggcggtgacggcagcaggactggacttc
cactctgaccgtctgtgggagctgtacatcgagtgggagaaggagcagggagacatgaag
gctgccactggagtctacgacagagtcctcagagtccccactcagctgtacagcagccac
tatgagaaattcaagactcatcttaatgcccatgcgcccaaggacgtcctctcagcagtg
gagtatgaggggttgcttgaggaatctaaacagagccacaagactgagaagtctgagttg
gctgagggggaagaggagttaccacctggggaagagaaggaacctacagaggaagaactg
attccgaaaatgcgagagctcctattggctcgcagagagaaggtgtaccaagacctggag
ggagaggtcaggaagaggtggaactttgaggaagctatcaagcgtccatatttccacgtg
aagcctctggaccggacccagctgagggcctggcactcctacctggactgggagctcacc
gagctggaggggggcggtgaaaaggaggtgaagaccgagaccgaaccagaggccatggag
ggccaggaagaggaggaaaaggaggggtcaaagagcagtgagatcgttgccgggggagac
cggagggtacggatcctgtttgagcgctgtctgattgcctgcgctctctacgaggagttc
tggaccaagtatgttcagtacctggaacctcagagtctggacgaggcgcggggagtgttt
cggcgagcctgtgagatccacctggcccacaaacacaccatgcacctgcagtgggccacc
ttcgaggagaggcatggtgacctaacagaggcacggcgagtgttggaggctctggaaacc
tcagtgccggggttggccatggtccggctgcgcagggcggggctagagagacgggcgggc
cggctagatgaatcagaagctctgctcagggacgcggtggcccaggccaaagagacacct
tacctccatgcgttctactccatcaaactggcccggctgctgctgaagctctgcaagaac
cccagcaaggcccggggagtcctgcaggaggcgctggagattagcccggatgacggtaag
ctgcacctgaacctgctggagctggaggtgtccggtgaccccagagggtcggccgagggg
gtgcagcagtgcgtggcgcgggcgctggccgcacccctctccccacagaccaagatcctc
ttctcccagaggggcctgcagtacgctgaggactatgggacctctgtgcaaagtgtgcta
acagtctatgaggagcatcagaagctactgaaagagctcggcaacaagaagagagtggct
gagaacggagacagtgaggacccagagaagatgagtaaaggagaagatggctctgctgtg
cccgctccaccacaggcccctcccacaatgccccatgtccccatgacgacaccacctcca
cccatgatgggtggggacatgagtgcggttcatgcaggctatggaggatatggaagctgg
catcagcaaccacagtatgggggatacggaggctaccagcaagcctggaactacaatcag
ggttactaccctcccagctaa
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