Oncorhynchus mykiss (rainbow trout): 110489214
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Entry
110489214 CDS
T07259
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110489214 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110489214 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110489214 (g3bp1)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110489214 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
110489214 (g3bp1)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110489214 (g3bp1)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110489214 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
110489214
NCBI-ProteinID:
XP_021417518
Ensembl:
ENSOMYG00000036089
UniProt:
A0A8C7TG16
LinkDB
All DBs
Position
14:35135462..35146542
Genome browser
AA seq
495 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPVESVYGQSE
IHKKVLALNFRDCHTKIRHVDAHATLNEGVVVQVMGELSNDMQPMRKFMQTFVLAPEGTV
TNKFYVHNDVFRYQDEVFGDSDSEPPEESDEDVEEMEERVPSPEVAQEEAAAFYKQTPCT
EAKRPEEEVALTPEPEAEPEAEAEPEAEPEAEPDVVDGKRDLEPETLQQQEHATEEQGEQ
CPVSSPLPSATADPAPAPAEDNRPFSWASVTSKNLPPSGVVPVSGIPPHVVKVPSAPPRV
EVKTEAAAQRTQPRGDQRPREARPGPPPVRGPRPGVREGEQGESSEVGRVVRYPDAHQLF
VGNVPHDVDKAELKEFFQQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKFR
GDVRLNVEEKKTRSAREGDRRDIRPRGPGGPGGPRERIGGPRGPPTRGGMAQKPSFGSGR
GTGPSEGGRYMGPRQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaaaccaagtgcccagctcgtggggcgggagtttgtccgacagtactac
acactactcaaccaggcacccgactacctgcacaggttttatgggaaaaattcctcctat
gtacatggaggtctggacaacaatggcaaaccagttgaatcagtctatggacagtcggag
atccataaaaaagttttggcgctgaactttcgtgactgccacaccaagatcagacatgtg
gacgcccatgcgaccttgaacgagggcgtcgtggtgcaagtgatgggggagctgtccaac
gacatgcagcccatgcgcaaattcatgcagacattcgtgctggcccctgagggcactgta
acaaacaagttctacgttcacaacgatgtgttccgttaccaagacgaagtgtttggggat
tctgactcagaaccccctgaagagtctgatgaggatgtggaggagatggaggagagagta
ccatcacctgaggtggcccaggaagaggctgcagccttctacaaacagacaccgtgcacc
gaggccaagagaccagaggaagaggtggctttaaccccagagcctgaggcagaacctgag
gcggaggcggagccagaggcggagccagaggcagagccagacgtggtggatggaaaacgg
gacctggagccagagaccctgcagcagcaggaacacgccacagaggagcagggagagcag
tgtccagtctcctcgcccctgccctctgccactgctgaccctgcccccgcacccgctgaa
gataaccggcctttctcctgggcgtctgtcaccagtaagaaccttccccctagcggcgtt
gtccccgtctctggcatcccccctcacgtcgtcaaagttccctcagcaccgcccagggtg
gaggtgaaaacagaagccgcagcacagagaacacaaccgagaggagaccagagaccacgg
gaagcaagacccggccccccaccagtcagaggaccccgacctggagtgcgggaaggagag
cagggagagtcgtcggaggttggccgtgtggtgcggtatccagatgctcaccagctcttt
gtaggaaacgttcctcatgatgtggacaaggcagagctcaaggagtttttccaacagtat
ggtactgtgcttgagctacggatcaacagcggaggaaagcttcctaactttgggtttgtg
gtgtttgacgattcggaacctgtacagaaaatcctaagcaaccggcccattaagttcaga
ggcgatgtccgactgaacgtggaggaaaagaagacgcgctccgcccgggaaggggatcgg
cgagacatccgccccagaggtccaggtggccccggagggccccgagagaggataggaggg
cccaggggcccccccaccaggggtggcatggcacagaaacccagctttggctctggacga
ggtactggacccagtgaaggaggtcgctacatgggacctcgtcagtga
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