Oncorhynchus mykiss (rainbow trout): 110489238
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Entry
110489238 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110489238
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110489238
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110489238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110489238
NCBI-ProteinID:
XP_036799479
LinkDB
All DBs
Position
14:42368435..42377369
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AA seq
757 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGEPTEPVEGPEDPSNGDTLLDWLNTVRRT
GNTTRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARADVETGEGEAQEEGP
AEAPGDGVEAVVGVEVQAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGTEAGT
EAGTEAGTGAGTGAGTGVPMETGEVLEEPVVEEMAVIVEPEAEMEPEAEVEAEMVPELVV
EVVPQPPSPVTATPPVSRPASPLVQATPAPAPPSPPPEEPPRRGQRRARSRSPEQRRTRA
RTTRSRSPLTLDRLDGLPRHVPNAAPSHSPPTLPPQAPAEGSSRTRQHVLSRQSTAEYDV
QSAGTGSGNAPEPVTTPPQEGEAAGAEGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANR
TRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMAL
QTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPDGGVAGMAEGAEP
PVSVGGPSVGGAGEARTEEGEEGVGVGLAPGIGLGVGGTPREGRGRPRAPISLEEPGSLP
FLRLAHFFLLNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLP
CSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggcccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaaccaacagaaccggtggaaggt
ccagaggacccgtctaatggcgacaccctcttggattggctgaacaccgtcaggcggaca
ggcaacaccacccgcagtggtcacagaggcaaccagtcatggcgggcagtgagccggacc
aacccaaacagcggagacttccggttcagtctggagatcaacgttaaccgtaacctggcc
gagcagcaggcccgcgccgatgtggagacgggcgagggggaggctcaggaggaaggccca
gcagaagcacctggcgatggggtggaggcagtggtcggagtggaggtccaggcagggact
gaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
gaggcagggactgaggcagggactgaggcagggactgaggcagggactgaggcagggact
gaggcagggactgaggcagggactggggcagggactggggcagggactggggtgcccatg
gagacaggagaggtgctcgaggaaccagttgtggaggagatggctgtcatagtggagcca
gaagcggagatggagccagaggctgaagtagaagcagagatggtcccagaattagtagta
gaggtagtcccacagccgcccagccctgtcaccgccacccctcctgtctccagaccagcc
agtcccctggtgcaggccaccccggcccccgccccccccagcccgccccctgaggagcct
ccccgacggggccagagacgagcccgcagccgtagccctgagcagcgccggaccagggct
cgcaccacacggagccgttcccctctcaccctggaccgactggacggcctcccccgccac
gtgcccaacgccgccccttcacacagcccccccaccctgcccccccaggcccccgcagag
ggaagctcacggactcgacagcatgttctgtcccggcaaagcactgcagagtacgatgtc
cagtcagccggaacagggtctgggaacgccccagagcccgttaccaccccaccccaggag
ggagaggccgcgggcgcggagggagcagcaggacgacgtccccccactatcatgctggac
ctgcaggtgcgccgtgttcgtccaggtgagtaccgccagagggacagcattgctaacaga
acccgctcacgctcccagaactccaacaacaccttcctgtacgagagtgagagggggggg
ttccgcaggaccttctcccggtccgagcgtgcgggtgtgaggacgtacgtcagcaccatc
aggatccccatcaggaggatcagtgatgcagggttgggagaggccacctccatggctctg
cagaccatgatacgacagatcatgaccggcttcggagagctcagctatttcatggactca
gactctgactcctcggactcaaaccgtggcggtggtaaccccactggcgctgccgaccta
gcagaggcgctcaacactcccgacgggggagtagctggtatggcggagggggcggagcct
cctgtctcagtgggtgggcctagtgtaggaggagccggggaggcaaggacagaggagggg
gaagagggggttggtgtaggtctggccccagggataggtttaggggtggggggcaccccc
agggaggggcgaggtcgcccccgtgcccccatcagtctggaggaaccagggtcactaccc
ttcctccgccttgctcacttcttcctcctgaatgatgaggatgaggaacagcccagagga
ctcaccaaggagcagatcgacaacctctccaccaggaactttggggagagtgatgctctg
aagacctgcagtgtgtgtatcacagagtatgctgaggggaacaagttgaggaagttgccc
tgttctcatgagtaccatgttcactgtatcgaccgctggctgtctgagaactccacctgt
cctatttgccgcagggccgtgttggtgtctgctaaccgggagagtgtggtctaa
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