Oncorhynchus mykiss (rainbow trout): 110489271
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Entry
110489271 CDS
T07259
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X2
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110489271
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110489271
03041 Spliceosome [BR:
omy03041
]
110489271
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110489271
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110489271
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110489271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
110489271
NCBI-ProteinID:
XP_021417622
Ensembl:
ENSOMYG00000037994
UniProt:
A0A8C7TMJ5
LinkDB
All DBs
Position
32:complement(35414623..35436141)
Genome browser
AA seq
665 aa
AA seq
DB search
MSRDRFNINVRGNNRGAGFQRRGAGPGGPMRGGMGNLNNFRQNQHPFQRGPHPGNFGKPP
NQIRPMTPQKPMPPTISQPGAQPIRPPPTPGPALTMKGPVQQQQAAAAAAPPATVAAPPA
PTATTPATAAPVAAPPAVATAPPKAAAAPPKAAAAPPKAAATPPAAAAAAPIGQPKMQSP
PPKPVPPKPAISSPPPNQMKKPALSSPPPNQMNRNQQRPGNANGNGHKSAPFNKKPEPQT
QNTQMEAEEAQHPKELRATLSSLRRPGEKTYTQRCRLFIGNLPNDISDDTFKKLFAKYGE
PSEIFINKNKGFGFIRLESRALAEIAKAELDDVPMKGRPLRVRFATHSAALSVKNLSPFV
SNELLEEAFSQFGVVERAVVIVDDRGRSTGKGIVEFASKPAARKALDRCNDGVFLLTTSP
RPIVVEPLEQYDDEDGLPEKLAQKNHNYHKEREEPPRFARPGTFEFEYSKRWKSLDDMEK
QQRQQVEKNIREAREKLEGEMDDAFHVHQANMIRQDLLRREEELRRMEEMHSAEMQKRKE
MQLRQEEERRIREEEMLRQREIEEQMRRKREEAYRSGNFMDNRDMRMTQGGTMGMADNQF
GSPNQKFPMGHQGMGGPSTGGAMMPNEMRNERNFPQGGRGGLGPNNQGFGRVREEFDGPA
KKPRF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggacagatttaacattaacgttagaggaaataaccgtggagctggatttcaa
cgccggggagctgggcctggtggtccgatgcgaggtggaatgggtaacctgaataatttc
agacaaaaccaacacccctttcaacgagggcctcatcccggtaactttggaaaaccaccc
aaccagatacgtccgatgacccctcagaagcctatgccacctactatttcccagccaggc
gctcaaccgattcggccaccacctactcctggccctgcgctaaccatgaagggccccgta
cagcaacagcaggccgcggccgcagcagcacctccggcgaccgtagcagcacctccggcg
cctacagcaacaactccagcgactgcagcacctgtagccgcacctccggctgttgcaaca
gcacctccgaaagccgcagcagcacccccgaaagccgcagcagcacccccgaaagccgca
gctacacctccagcagccgcagcagcagcgccgataggtcaaccaaaaatgcagtcccca
cctccgaagcctgttcctccgaaacccgcaatctcatctcccccaccaaaccaaatgaag
aaaccagcactttcatctcccccaccaaaccaaatgaataggaaccagcaaagaccaggc
aacgccaatggaaatgggcataaatctgcaccctttaacaaaaaacctgaacctcaaact
cagaatactcaaatggaggccgaggaagcccagcaccccaaggagttgagagcgacgttg
tcatcgctgcgcagacctggcgagaagacatacactcaacgatgccgccttttcattggc
aaccttcccaatgatatctcagatgacacgttcaagaagctgtttgcgaagtatggcgag
cccagtgagattttcatcaacaaaaacaaaggctttggcttcatacgcctggaatcccgt
gcattggctgagatagctaaagctgaactggatgatgtgcccatgaaaggcagacctctt
cgggtgcgcttcgcaactcactctgctgcactgtctgtgaagaacttgtcacctttcgtt
tccaatgagctactggaggaggccttctcccagtttggagtggtagagagagctgtggta
attgtagatgatcgcgggcgttccactggcaagggcattgttgaatttgcctctaagcct
gctgcacgaaaggccctggatcgttgcaacgatggcgtcttcttgctcaccacgtcacct
cgtccaattgtcgttgagcctcttgaacaatatgatgatgaggatggtctaccagagaaa
ctggcacagaagaaccacaactatcataaggagcgggaggaaccgcccaggtttgcccgt
cctggcacatttgagtttgaatactctaagcgctggaagtccctggatgacatggagaag
cagcagcggcagcaggtggagaagaacattcgcgaagcccgtgagaaactggagggagag
atggacgatgcgttccatgtgcaccaggccaacatgatccgccaagatctgctgaggcgg
gaggaggaactacggcgcatggaagagatgcacagtgcagagatgcagaagaggaaagag
atgcagctcaggcaggaggaggagcgtcgcatacgcgaggaagagatgcttcgccagagg
gagattgaggagcaaatgcgccgcaagcgtgaggaggcctacaggagtggcaacttcatg
gacaatagggatatgagaatgactcagggtggcaccatgggcatggctgacaatcaattt
ggctcacccaaccagaagttccccatgggacaccaaggcatggggggacccagcactggg
ggagccatgatgcccaacgaaatgcgaaatgagcgaaacttccctcagggaggccggggg
ggactgggtcctaacaaccaagggtttggcagggtccgtgaggagtttgatgggcctgcc
aagaagccccgcttttaa
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