Oncorhynchus mykiss (rainbow trout): 110489358
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Entry
110489358 CDS
T07259
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110489358
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Cadherin related
110489358
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
110489358
NCBI-ProteinID:
XP_021417751
Ensembl:
ENSOMYG00000032848
LinkDB
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Position
2:39256426..39298064
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AA seq
958 aa
AA seq
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MDRMSFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPTGSSSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPSVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAV
VPDSIAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNGQSNDDSFS
HYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGVIPNPAPRQRLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSALVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELNPEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVIMGVFRIRSIHRRGEGARGGSKEDSGQWDD
SALTIIVNPMESYESRMGISADTEGEGEEDEEVVESPDNDDQRIIIKKEGRDGNPRRY
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttttctctccttcctcctcctttgcttgacttcggttgccaatggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggtatcgtcatggag
aatgacaacaccgttcttctcaatccaccactgttcgccctggataaagatgctccactg
cactatgcaggtgagatctgtggcttccgggtgcacaatgggcccacgggatccagttcg
gtacagtttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaa
gagcccctggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgt
ggagagggccccgatggagtcaacagcaagaagtcccacaaggctacggtgcatgtacgt
gtgaatgacgtaaacgagttctccccagtgttcgtggagcgtcgctatgaggcctccgtc
ccagaaggccgtctgttcgaccgcatcgtgcgcgtcgaggccctcgacgcagactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccagcgttccctttgtcatc
gataacgatggtaacattaagaacaccgagccattggattcgaagcgccagcgtgtccac
accttctgggtgaccgcgttcgactgtggcaagaaccgcgctcaggccgacgcccaggtc
gtcgtcacggtcaaaccgtcctgcaaacccggctggatcggttggtcgaagcgggtggag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgcgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaaaggc
tgtgacagggacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggt
gaagtggacttactcccgcccccgtccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcgtccctggtgttctcctttaatggctccacccatgttgctgtg
gtacccgactctattgccgcggccgtatccggagaccatttcaccctccagctgtggatg
cgaaggggtgggatcaacacccagcctccgactaatcaggccagaggaaaccgcagggag
gaggagactatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcc
cactactctctctccgttcatggctgccgtctctctcttttctactggcccgacgtctcc
gctgcgcggcccgtgaaattcctctggaaactggagcaggtgtgtgacagcgagtggcat
cacctgtccctcagtgtccagttcccctctgtgacactgtatgtggatggagtcaccttc
gaccccgccctcatccatgacaacggagtcatacccaaccctgccccacgacagcgactg
gtcattggcgcctgctgggagacagaagataaacagaaggacatccttaacaacaccatc
cctgaagggaaagacacagggaagtatgtgggtggttaccgtggcctgttgtcaggggtg
acggtgcgtccagggagtgtggagccccacagtgtggtggagtgtctgtacgcctgcaga
gaggggctggactttggggacctggagaccttgggctcaggcatgaaggtgcatgtgaac
ccaagtcagtctgcgctggttctggagggtgatgatattgagagcttcaacagggccgtg
caacaggtgacctacaggaactctctccgctttgccacccctggagtcaggccactcaaa
ctgaccacctctctcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggag
ggctacctggtggtccttcagcctgacgcccctcagatctccctgtctggggtcggcccc
cacctggcccgccccgcgcctgaattcgagggcccccgtggtgtacccctcttcccagag
ctgaggattgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggaggga
ggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctg
ggggaggagctaaacccagagagggaggagctcctggtggacatggatgccctgagagag
aggggtctggagataatcaacaccactgcttacatcgccatcacaggagctgagtccatc
tccgtgtatgaggatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgc
tttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgag
ctcacactggaggtgaacttcctgcactccttggacagtctgtaccacccgtctcacctc
ctggcctcccagcagcagttccttcacccgtctcatcactctggggagctgagcggacac
accctgcctaacccccaccgcaactcagtggtgccaggagcggccacagtcatcattatg
gtgtgcgtgggcttcctggttgtcatggtgatcatgggagtgtttcgaatccgctccatc
caccgccgtggcgagggcgccaggggagggtctaaggaggacagcggccaatgggatgac
tctgctctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggtatatca
gctgacactgaaggtgagggggaggaggacgaggaagtggtggagtcgcctgacaacgac
gaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctactaa
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