Oncorhynchus mykiss (rainbow trout): 110489367
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Entry
110489367 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110489367
04121 Ubiquitin system [BR:
omy04121
]
110489367
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110489367
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110489367
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110489367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_UBOX
zf-RING_5
DUF7830
zf-B_box_Trim66
zf-C3HC4
zf-RING_2
Beta-prop_IFT122_1st
zf-C3HC4_4
MksF
Ig_GEX2_N
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
110489367
NCBI-ProteinID:
XP_036827304
LinkDB
All DBs
Position
32:9489794..9532662
Genome browser
AA seq
825 aa
AA seq
DB search
MALFSDSDLQTCLLCKELCGSSSATISCNSSTSSSSSHSSSSSSRRLHVLPCLHTFCRQC
LEGQRSHGDPLKLSCPTCNQKVSISEAGVDSLPSSNFLLSNLLDSEQLQLGQNKNGHRGV
SGCSVPRFHRAHSVLHPNRLGGPQCSSCGEGDPASFHCLDCQEYLCDNCVRAHQRVRLTK
DHFMESLQHASQGLASPIAGRGRGVGGGVGLSLTQPFQSNSSLLPLFQDRMSFCQHHDNK
VFLFFCETCSVPICRECSVGRHMGHSLVYLQDAVQDSRDIIIQLLADAQQGRQAVQLSME
KIQAIAEQVDIKAKVVQTEVKNVVLRHLKALEDRESQLLWKVEKIQQLKAKSLYLQIEKL
HQNLTKLDSTITAVTQVLDEGCHLDVLLARERMLTQIQELKSLRGLLQPQEDDRLMFTPP
EQALYIAIQSMGLISSGAFAPVTKAHGEGLKTALRGKTASFTVIGYDHDREPCLSGGDAV
SAVVMAAADGNLSAAEVCDNQNGSYTVSYLPKTEGEDLVSVLVCNQHIMGSPFKVLVKSG
RRYGALGSPVSTFGSEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKPCGAFHHKF
GSLGSRPGQFDRPAGVACDSQQQIIVTDKDNHRVQVFTFDGQFMLKFGEKGTKNGQFNYP
WDVAVNSAGKILVSDTRNHRVQLFGPDGSFINKYGFEGTLWKHFDSPRGVAFNHEDHLVV
TDFNNHRLLVIRPDCQSARFLGSEGTGNGKFLRPQGIAVDQENRIIVADSRNHRVQVFEP
NGNFLCKFGTHGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttctcagactccgacctgcagacctgtcttctctgcaaggaactctgtggc
tcctcctccgctaccatctcctgcaactcctccacttcctcttcctcctctcactcgtcc
tcctcttcctcccggcgcctccatgtcctcccctgcctgcacaccttctgcagacagtgt
ctggaggggcagcgcagtcatggggaccctctcaaactcagctgccccacctgcaaccag
aaggtctccatctccgaggctggagtggactctctcccttcctccaacttcctcttgagt
aaccttctggactcggagcagctccaactcggccaaaataagaacggtcaccggggggtc
agcgggtgctccgtacccaggttccaccgcgcccacagcgtgctccacccaaaccgtctg
ggagggccccagtgcagctcctgtggcgagggggacccggccagcttccactgcctggac
tgccaggagtacctttgtgataactgtgtccgagcccatcagagggtccggttgaccaag
gaccacttcatggagagcctgcagcatgcaagccaaggcttggccagccccatcgcaggt
agaggcaggggggttgggggaggtgtagggttgtccctgacccagcccttccagtccaac
tcctccctgctgcctttgttccaggataggatgagcttctgtcagcaccatgacaacaag
gtgtttctgtttttctgtgagacgtgctctgtgcctatctgtagggagtgtagtgtgggc
agacacatgggccacagcttggtctatctacaggacgctgtccaggactccagagacatc
atcatccagctactggccgacgcacagcaaggaagacaggctgtacagttaagtatggag
aagatccaggccatagcagagcaggtagacatcaaggccaaggtggtccagacagaggtg
aagaacgtggtcctcagacacctgaaagctttggaggacagagagagtcagctactctgg
aaggttgagaagatccaacagctgaaagccaagtccctgtacctgcagatagagaaactg
catcagaacctgaccaagctcgacagcaccatcacagcagtcactcaggtgctggatgag
ggttgtcacctggacgtgctgctggccagagagcgcatgctgacccagatccaggagctg
aagtctctcagaggcctgctgcagccacaggaggatgatcgtttaatgttcacccctcca
gaacaggccctgtacatagccatccagtccatggggttgatcagtagcggagcgttcgct
cccgtcaccaaagctcacggcgagggcctaaagaccgcactccgtggcaagaccgcctcc
ttcaccgtaattggctacgaccacgacagggagccctgcctctcgggcggtgacgcagtg
tcagcggtggtgatggcagcggcggatggtaacctgtcggctgcggaggtgtgtgacaac
cagaacgggtcgtacacggtcagctacttacccaagactgagggagaagatttggtgtca
gttctggtctgtaaccagcacatcatgggcagccccttcaaggtactggtgaagtctggg
cgacgctacggggctctgggttcaccggtgtctacgtttggcagtgagggggagggtgac
ggtcagctgtgtcgtccctggggcatcagtgtggacaaagagggatatgtggtggtggcc
gaccgcagtaacaaccgcgtacagatcttcaagccgtgcggtgccttccaccacaagttt
ggctccctgggctctcgccccggtcagtttgatcgtccagcgggtgtggcgtgcgacagc
caacagcagatcatcgtaacggacaaagacaaccaccgtgtgcaggtgttcacctttgac
ggacagtttatgctgaagttcggcgagaagggcactaagaacggtcagttcaactacccc
tgggatgtggcagtgaactctgcggggaagatcttggtctctgacaccaggaaccaccgc
gtccagctctttggccctgacggctcgttcatcaacaagtatggctttgagggcaccctg
tggaaacactttgactcgccgcggggtgtcgcctttaaccatgaggaccacctggtcgtc
accgacttcaacaaccaccgtctgctggtgattcggccagattgccaatctgcccggttc
ctgggctccgagggtaccggtaacgggaagttcctgcgtccccagggcatagcggtggac
caggagaaccggatcatcgttgccgactcgaggaaccaccgtgtgcaggtgttcgagccc
aacgggaacttcttatgcaaatttggcacccatggcagtggcttcggacagatggaccgc
ccctccggtgttgccgtgacgcctgacggagtcatcgtggtcgtcgacttcggaaacaac
cgcatcctcaagttctaa
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integrated database retrieval system
