Oncorhynchus mykiss (rainbow trout): 110489370
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Entry
110489370 CDS
T07259
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110489370
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110489370
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110489370
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110489370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
HEAT_DAAF5
ParcG
Arm
TAN
IFRD
Motif
Other DBs
NCBI-GeneID:
110489370
NCBI-ProteinID:
XP_036827377
LinkDB
All DBs
Position
32:complement(10205650..10316136)
Genome browser
AA seq
1533 aa
AA seq
DB search
MEEHDNMDYLYQQVLQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTIDELTGWV
NASNYKVALLGIDIAGAFVNRLGEHFRGYLGTVVPALVDRLGDSKDQVREQSQNLILRCM
GVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQPLRLSKIVPHLCTLTGDQ
NPQVREAATTSLVDVYRHIGERVRADLGKSGLPAARLQTIYGRFDEALNSGNMALSPSHD
RSFEDDADSADGNRAQAAFKVPKVPKKSAESSAARRPNTTASKIGGASKDGTGGIDEEDF
IKSFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
YQHLRLLDGAFKLSAKDLRSQVVREACVTVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGASAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADSLFNSLEPSYQKSLQSSLKS
SGSVTSLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHIGQVGPVRLTPGSYSSLDDASDKTDGRLRTKQPLTTATSASHVDSRGRSRTK
MVSQSQRSYESDCTPGSQSATIVGAGSRSGSPGRVLTSTALSTLGSGAQRVLAGAGGRRS
RIPRSQGCSRDSSPTRLSVAPSSVSSIYKATSRGARGSRIPRPSMSQGCSREASRESSRD
TSPVRSFTPLASRHYSRSTGALHTADALGAAGAGYSISQSSHLSSSVSTMRVLTGSDIEE
ALADALLLGDITSKKKPARRRYENYGMYSDDDANSDASSACSDRSYSSRNGGVIPTYMRQ
TEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRE
SGSKVYGTSESGISSASFKRVFSMFLETLVDFVLVHREDLQDWLFVLLTQLLKKMGADLL
GSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIETLTLQMDPQ
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQLVLISLFQLNTPEFTMLLAALPKTFQDG
ATKLLQNHLRNTGNTAQAPMGSPMTRHTPRSPASWSSPLTSPTNTSLNTSTLGAFDYDTE
NMNSDDIYSSLRGVTEAIQNFSVRSQEDMNETGGGADQVDGVRTALDNKTSLLNTPLLSS
SPRGSRDPFTDSPFKHNVKDTSLDESDQQTDDSSIDQSELVTELLKELSNHNERVEERKV
ALCDLLKLIRENTLQVCWDEHFKTILLLLLETLGDREHVIRALALRVLREILSHQPWRFK
NYAELTIMKALEAHRDPHKEVARAAEETAAMLASSISPDQCVKVLSPIIQSADYPINLAA
IKMQTRVIERVPHHGLVTMLPEIVPGLIQGYDNAESSVRKACVFCLVALYAVIGEELKPY
LNQLSGSKLKLLNLYIKRAQSGSSGGEPPPDSL
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggactatttatatcagcaggtcctgcagaaagacgttacc
cgcaggttgcaggtcgggcaggatttaatagactacctgaacgacccgcagaggtcctcc
gatgtggaacaagacaaaccccggctggataaaaccatagatgagctgacgggatgggtc
aacgccagcaactacaaggtggcgttgttggggatagacattgccggggcgttcgtcaat
cgcctgggggaacactttagaggatacctgggaacagtggtcccagccctcgtggacagg
ttgggggacagtaaggaccaggtcagagaacagagtcagaatcttatcctccgctgtatg
ggagtgaccgcgtcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aacttccgcagcagagagggggtgtgtctggttctctgcgccacgctcaacacgtatggt
gctcagccgttgcgtctcagtaagatcgttccccacctctgcactctaactggagaccag
aacccacaggtccgtgaggctgccacaacatctctggtggatgtgtatcgccacatagga
gagagagtcagagccgacctgggaaagagtggcctgcctgccgcacggttacagacaata
tatgggcgttttgacgaagctttgaattctgggaacatggctctcagccccagtcacgac
cgtagttttgaggatgatgcagacagtgcagatgggaaccgtgctcaggctgccttcaag
gtccccaaggtccccaagaagtcggcagagtcctctgctgcacgaagacccaacactacg
gcttccaagatcggaggtgcgtctaaggatggaaccgggggcatcgatgaagaagacttc
atcaaatctttcactgacgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaataagatcagagagatctgttctgatgacaaacatgactgggaccagagagcc
gctgcaatgaagaagatccgctcgctgattgttgccggggcaacggagtacgagtgtttc
taccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcgtcactgtggcccacctgtcgacagtgttgggtaataag
tttgaccatggtgctgagggcattcttcctgtcctgttcaacctcatccctaactgtgcc
aaggttatggccacttcaggggcgtctgctatacgcttcatcatacggcacacacacgtt
cccagactcatccccctgatcaccagtaactgcacctgcaagtctgtggccgtcagacgg
aaatgttttgacttcttggacctgctgctacaggagtggcagacccagactctggagaga
catacagcggtgatggtcgccagcattaagaagggaattgcagatgccgacgcagaggcc
agagtagaggcccgcaaggcatactggggtcttaggaaccatttcccgggggaggcagac
tctctgttcaactcgttagagccgtcctatcagaagagcctccaatcgtctctcaagagt
tctgggagcgtgacgtctcttcctcagagcgaccgctcctcttcctcatcacaggagagc
cttaatcgtcctctgtcatctaaatggtcagctgctcctggaagagtcccggcgggtcat
aagggcggggcgtcgccgggctccctacagcgttcccgtagcgatgtagatgttaatgcg
gcaacggttgctaagcagcggcacatcgggcaggtggggccagtgagactgacccccggc
tcctactcctcattggatgatgcctcagataaaacagatggtcgtctgaggaccaagcag
cctctcaccacggcaaccagtgccagccacgtggactcccggggacgcagccgcaccaag
atggtgtcccagtcacaacgttcctacgaatcagattgcacaccaggatctcagtctgct
accatcgttggtgccggcagtcggagtggttccccgggtcgcgtcctgaccagcaccgct
ctgagtacgctgggttctggagcccagagggtcctagctggtgccggagggagacgtagc
cgcatcccccgcagccagggctgctcacgagactcctcccctacacgcctgtctgtcgct
ccctccagtgttagttccatctacaaagcaacgagcagaggagctcggggcagtcgtatt
cctcggcccagtatgagtcagggctgcagtagggaggccagcagagagagcagcagagac
accagccctgtgcgttcctttacacctctggcatcgcgccactactctcgctccaccgga
gctctccacaccgccgacgctttaggggccgcaggggcagggtacagtatcagtcaatcc
agtcatctgtcatcgtcagtcagcaccatgagagtcctcactggatctgatatagaggag
gccctcgctgacgccctgctgttgggagacataacatccaagaagaagccagcgcggcgt
cgctatgagaactatgggatgtattcggatgatgatgctaacagtgacgcgtccagcgcc
tgctcagaccgctcctacagctccaggaacggaggagtcatccctacgtacatgagacag
actgaagacgtggccgaggtgttgaaccgctgtgccagtgccaactggtcggagaggaag
gaggggcttctgggtctacaggctctactgaagaatcaacgcaccctcagtcgtgtggag
ctgaagaggttgtgtgagattttcaccaggatgtttgcagacccccacagtaagcgagaa
tccggatctaaggtctatggaacgtcagaatccggtataagctcagcctccttcaagaga
gtgttcagtatgttcttggagaccctagtggactttgtcctggtgcacagagaagacctg
caggactggctgttcgtcctgctcacccagctgctgaagaagatgggagctgacctgctg
gggtctgtccaggccaaggtccagagagcactggacatcacacgagagtctttccccaac
gacctccagttcaccatcctcatgaggttcactgtggaccagactcagacaccaaacctc
aaggtgaaggtggctgttctgaagtacattgagaccttgaccctgcagatggatcctcag
gactttgtgaactccagtgagacgcgcctggctgtgtctcgcatcatcacctggaccaca
gagcccaagagctctgacgtcaggaaggcggcccagttggtactgatctccttgttccag
ttgaacactccagagttcaccatgctgctggcagccctgcccaagaccttccaggacgga
gccaccaaactgctacagaaccacctgaggaacaccggcaacactgcacaggccccaatg
ggaagccccatgacacgccacaccccccgctctcctgccagctggtccagccccctcacc
tctcctaccaacacatcactgaacacatccacactcggtgcgtttgactacgacacagag
aacatgaactcggacgacatctacagtagtctgagaggagttacagaggccatccagaac
ttctccgtccgcagtcaggaagacatgaacgaaacgggtggtggtgctgaccaggtggat
ggagtccgcactgctctggacaacaagacttctcttctgaacacccccctgctctcctct
tctccccgggggtcccgagacccctttacagactccccctttaaacacaacgtcaaagat
acttcattggacgaatcagaccagcaaactgatgacagcagcattgaccaatcagagctg
gtgactgagctgctgaaggagctgtccaatcacaatgagcgtgtggaagagagaaaggtg
gcgctttgtgatctcttgaagctgattcgagaaaacaccctgcaggtctgctgggacgaa
cacttcaaaaccatcctcctgttactactggagacgctgggggacagagagcatgtgatc
agggcgttagctctgcgtgttctgagggagattctgagccaccagccctggaggttcaag
aactacgctgaacttaccatcatgaaggccctggaggcacacagggacccacacaaagag
gtggcgcgagcggcagaggagacggcggccatgctggcgtcgtccatcagtccagaccag
tgtgtcaaggtgttgtctcccatcatccagtcggctgactaccccatcaacctggctgcc
atcaagatgcagaccagagtaatagagagggtcccccaccacggactagtcaccatgctg
ccggagatagtccccggactcatacagggttatgacaacgcggagagcagtgtgaggaag
gcctgtgtattctgtctggtggccctctatgcagtcataggggaggagctaaaaccttac
ctcaaccaactgtctggcagcaagttgaagttgttgaatctgtacatcaagcgtgcccag
tcaggctccagtggtggtgagcccccaccagacagcctatag
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integrated database retrieval system
