Oncorhynchus mykiss (rainbow trout): 110489377
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Entry
110489377 CDS
T07259
Name
(RefSeq) integrin beta-8-like isoform X1
KO
K06591
integrin beta 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04514
Cell adhesion molecules
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110489377
04514 Cell adhesion molecules
110489377
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110489377
09142 Cell motility
04820 Cytoskeleton in muscle cells
110489377
04810 Regulation of actin cytoskeleton
110489377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110489377
04515 Cell adhesion molecules [BR:
omy04515
]
110489377
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110489377
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin beta subunits
110489377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
110489377
NCBI-ProteinID:
XP_036827467
UniProt:
A0A8K9XU63
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Position
32:10759051..10809399
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AA seq
862 aa
AA seq
DB search
MHRCTNDHRAFPALLLVSADARYFPVDYRIVSVVACDRSCCWCLDYKPAPGVDMTSWLRK
YDNPVLLFLLLAANITSGSSHSGESVCSSPPVSSCSECLQRGPRCAWCFQERFLDGAEVG
ERCDLAVTLARRGCGLEFIEHPEVMVEVNPTTSRTQVSPGEITLTLQPGAEASVVVAVQQ
LERYPVDLYYLVDVSASMQDNLDQLKKVGVALSTRMREHSSDLRLGFGSFVDKNVSPYIN
VHPSKINNPCSDYEVKCLPAHGFHHVLSMTSNMSEFTRIIKRQRISGNMDTPEGGLDAML
QATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLENSVYMKSSTMD
HPSLGLLAEKLLENHIYPLFAVEQLQYQWYEELVTLLPGSSLMFQAPNLIDLVVDAYKRL
LSVVQVSVSVEDRAFSRFLVSVSPLCPEGSESHDHSCSNVQPNQTVYFNITIGLLSCPDD
DEEDDVVQVFVRPVGYNESVVIKVRSRCRCHRCHDDATHQSSCGEDTPDTDHNNQEVNTH
THLSHTHSSHTHTPELDLEHTHSQEGPRQCGAEASRVDCSGRGVCVCERCVCERNSLGTV
YGTYCQMDDYSCPYQHEILCGGRGVCVSGECVCEEGWTGESCGCPVSTATCLLNNGLLCS
GRGRCVCGRCVCDDHQHSGEFCEKCPTCHSSCQSHWGCIDCHLSHGLSQRKMGHCNHTCP
PLVVYVNDVTGEGWRQCVYMKDNCRYRFYTELFTGNNQLHINTQPECVSRGRYMRMFVSV
CVLTFLSGLVMIAVLVLLLQRQSLPQGGATDPQYNPTGKDQSYIPTTNEKTTSYWRNCPL
DPDQPMEMYITIPKMPMGEPWQ
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgatgcaccaacgaccaccgtgcattcccggcgctgcttcttgttagcgcggac
gcaaggtatttcccggttgattatcggatagtgtcagtagtagcctgtgaccggagctgc
tgctggtgtctcgactacaagcctgctcctggtgtggatatgacttcctggctacgtaaa
tacgacaatcctgtgctgctcttcctgcttttggccgctaacatcaccagcgggagctct
cattccggtgagagtgtgtgttcgtctcctcctgtctcatcatgttcagagtgcctccaa
cgcggaccacggtgtgcctggtgctttcaggagcgtttcctggatggagctgaggtggga
gagcgctgtgacctggcagtgaccctggccaggagggggtgtggcctagaattcatagag
catccagaggttatggtggaggtcaaccctacgaccagcagaacccaggtttcacctgga
gagatcacactcacactccaaccaggtgctgaggccagtgtggtagtagcagtacaacag
ttagagaggtatcctgttgatctgtactacctggtggacgtatcagcatccatgcaggac
aacctggaccagctgaagaaggtgggcgtggccttgtccacccgtatgagagaacattcc
agtgatctgcgcctggggttcggctcctttgtcgacaaaaatgtctcaccctacatcaac
gtacacccctccaagataaacaacccctgcagtgactacgaggtgaagtgtcttccagct
catggcttccaccatgttcttagtatgacgtccaacatgtcagagtttacacgcatcatc
aagagacagaggatatcaggcaacatggacacacctgagggagggctggatgctatgctg
caagctactgtatgccagggagaggtgggttggcgtggggaggccaagcgtctgttgttg
ttgatgacagaccagccttctcacctggcgttggacagcagactggctggtatagtcaca
ccccatgatggactctgtcatctggagaacagtgtttatatgaagagttctaccatggac
catcccagtttaggcctgctggccgagaagcttctagagaaccacatctatcctctcttt
gctgtggaacaactacaatatcagtggtatgaggagctggtcacgttgctaccgggctcc
agtctaatgttccaggctcccaacctcatagacctggtagtggatgcatacaagaggttg
ttgtcagttgtccaggtgtctgtgtcagtggaggacagagcgttcagtcgttttctggtc
agtgtctctcctctttgtccggaaggatctgaatcccacgaccacagctgttccaatgtc
cagcccaaccagacggtctacttcaacatcaccatcggcctgctgtcctgtcctgacgat
gatgaggaagatgacgtggtccaggtcttcgtcaggcccgtgggttacaatgagtcagtc
gtcatcaaggttcgatcacgatgtcgctgtcaccgttgccacgacgacgcaacccaccag
tcgtcttgtggagaggacaccccagacacagatcataataatcaagaagtcaacacacac
acacacctctcacacacacacagctctcacacacacacaccggagttggacctagagcac
acacactcccaggaggggccgcggcagtgtggtgcggaggcatcacgggtggactgtagc
ggccggggagtgtgtgtgtgtgagaggtgtgtgtgtgagaggaacagtctggggacggtg
tatggaacatactgtcagatggacgactactcctgcccctaccaacacgaaatactgtgt
ggaggacgaggtgtgtgtgtgtccggtgagtgtgtttgtgaggagggctggacaggggag
agctgcgggtgcccggtctccacggcaacctgcctgctcaacaacgggttgctatgcagt
gggcgtggcaggtgtgtgtgtggcaggtgtgtgtgtgatgaccatcaacattctggagag
ttctgtgagaaatgccccacctgccacagctcctgtcagtcacactgggggtgtatagac
tgtcacttgtctcacggtctgtctcagagaaagatggggcattgcaaccatacctgcccc
ccattggtggtttatgtcaatgatgtcacaggtgagggatggagacagtgtgtttatatg
aaagacaactgtcgctatcgcttctacactgagctgttcacaggaaataatcagctacac
atcaacacacagcctgagtgtgtatccagagggcggtacatgaggatgtttgtcagtgtg
tgtgtgttgacattcctctctggcctggtgatgatcgctgtactggtgttgctgctgcag
agacaatccctgccacagggtggcgccactgacccacaatacaaccccactggcaaggac
cagtcctacatcccaaccaccaatgagaagaccacatcctactggaggaactgccccctg
gaccctgaccagccaatggagatgtatatcaccattccaaagatgcctatgggtgaaccc
tggcagtga
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