Oncorhynchus mykiss (rainbow trout): 110489481
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Entry
110489481 CDS
T07259
Name
(RefSeq) homeobox protein MSH-D isoform X1
KO
K09341
homeobox protein MSX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110489481
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110489481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Homez
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
110489481
NCBI-ProteinID:
XP_021417855
Ensembl:
ENSOMYG00000015061
UniProt:
A0A060Y7C1
LinkDB
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Position
14:31183746..31186472
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AA seq
271 aa
AA seq
DB search
MDSPVDLKDGFSTYEDTPPLRQFKERKTPLSPLPFSVEAIMLDRTHSEGERRGSGTIISP
LGNYSISVSRQPSSPEYFIDNFDPSSSPVKSETSEPRDCASWISPRCRLSPALNQVNFSL
RKHKTNRKPRTPFTTSQLLSLERKFHHKQYLSIAERAEFSSSLSLSETQVKIWFQNRRAK
AKRLQEADVEKLKIAAAGVGSKPGFYPPGFYPPGFSSLPFPLCVSLEGLGGEVSEMCGGQ
GYPFRRTTLLTTVPHLGVYTSPVGYGLLHLS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggattctccagtagatttgaaagatggcttttcaacctatgaggacactcctccactg
aggcagtttaaggagcgcaaaacacctttatcacctttacctttcagtgtggaagcgatc
atgttggataggactcatagcgaaggagagagacgcggcagcggtacgataatctctccc
ctggggaattactctatatcggtgtccagacagccgtctagtccagaatactttattgac
aattttgacccgtcttcttcgccagttaaatcagagacgtcggaaccaagggactgtgcg
tcatggatatcaccgcggtgcaggttgtctccagcgctcaaccaggtcaatttctccttg
aggaaacacaagaccaacaggaagccccggaccccattcaccacctcccagctcctgtcc
ctggagaggaagttccatcataaacagtacctgtccatcgctgagcgggctgagttctcc
tcctcgctgtccctctcagagacccaggtcaagatctggttccagaaccgacgggctaaa
gccaagagactgcaggaggcagatgtggagaaactcaagattgccgctgcaggtgttgga
tccaagccggggttctatcccccggggttctatcccccggggttctcctcactgccattc
cccctctgtgtcagtctggagggtctgggtggggaggtctcagagatgtgcggaggacag
gggtaccccttcagacgtaccactctgttaacaaccgtaccacatctgggggtgtacacc
tcacctgtagggtacggactcctccacctgtcttga
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