Oncorhynchus mykiss (rainbow trout): 110489510
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Entry
110489510 CDS
T07259
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110489510 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
Patched domain-containing proteins
110489510 (ptchd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Mucin
Zip
Motif
Other DBs
NCBI-GeneID:
110489510
NCBI-ProteinID:
XP_036801513
UniProt:
A0A8C7QEI9
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All DBs
Position
15:389255..470641
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AA seq
1006 aa
AA seq
DB search
MVGVPAVSSRWWERLKTLCPERARRMLRQVLQAGLRSSFQALGRFVASHPVFFASAPVLV
SVLLGASFSRYRVEGNVESLLVPKHSLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGR
VIVTSRRGSILDPLHTDLVLKLHRAVVQLQVPVLGFNYSFSHLCLLDDKNTCIIDDIIRA
LEDSQSARFANRSSLPLRYPITRLADGRMAYIGHQLGGVQAWGAGPAVQGPGGVSGRGQG
VRSARALQLTYYLQARGALTDRVASQWEQAFCGELGRFGAGHPELSLYPFTSSSLRTDFQ
ASSVLARRPLLASVCVCLVLAVGCCSMRDCVRAKPWLGLLALLSIALSGLTAAGILNLTG
TTYNSTYLGVPFILLGHGLFGTFEMLSSWRRTREDQHVKERVASVFSDVMLRYSGATLLH
QVSLGLAASPLTNLEAVRLFCRCAALGVTVGYLYTLSFYATCLVATGYLETGYRHGCFCR
RVPKKGALDTKPRWYRCLMYTRYQDETHSQTHSHTPNSTHTHTPNAAHTYTHTANPAHSH
THTHTPNTTHTHDHTPNTTHAHTHTPNTTHIHAHTHIPNTHTPTTISELRPQDSHLLLGC
VQRCYGDWITNTYVKPFMVLLYLVYISFGLMGFLQVSQGSEPSSLVAMDTGTLLYARAQQ
RYFSSYSPVIGFYVYESAPYWNTSVQRDLLEYAKGFQRISWLESYLDYLTERNLSTTSQS
RESFTRMLRLSFLRQPQFAHFADDIIFAERDEGEEPEMAASRVFLVAKTTENKREEMSVL
LDTLRRLSLTSRVRFLIFNPSFVYLDRYATAVSSPLRHSLMAVLFLLGLSSLAVVEPLVA
VWLSLTLLSVQFGVLGFMTLWGVELDCVSVLCLISALGHSADCCGPLLATFSSGRGDSRT
VWVRLALERHGVPSLQTLICYTAALLPLAAVRSNLTRSLFRCLVLTAFCSALHALAFLPT
LLTFLPPAKKTGSRQGDRGEGEGLREEVECVEMVDSTRVVDQITTV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtgtgcccgctgtttcctctcgctggtgggagaggctcaagacgttgtgtcca
gagcgcgctaggaggatgctgcgccaggtgttgcaggcaggcctgaggagctctttccag
gctctgggtcggttcgtggcgagccacccagtcttcttcgcctccgcccccgtactggtg
tctgtcctgctgggggccagcttcagtcggtatagagtggaaggtaacgtggagtccctc
ctggttcctaaacacagtctggcaaagatagaaggaaacctggtggactcactgtttcct
gtcaacagatctaaacacaccctgtactctgacctgcagactccaggtcgttacggtcgt
gttatagtcacctctaggagaggcagcatcctggaccctctacacacagacctagtactc
aagctccatcgtgctgtcgttcagctccaggttccagtgttggggttcaactactctttc
tcccacctctgtcttctcgacgacaagaatacctgcatcatcgatgacatcatccgagcc
ctggaggacagccaatcagctcgcttcgctaaccgttcttcccttcctctgcgctacccg
atcacacgtttggctgacgggcggatggcctacattggtcaccagttaggaggggtgcag
gcgtggggggcggggcctgcagtacagggtcctgggggtgtgtctggtcgaggccaggga
gtccgcagcgctagggctctgcagctgacctactacctgcaggctcgcggcgccctgaca
gacagggtggctagccaatgggagcaggcgttctgtggcgagctgggccggtttggggcg
ggacaccctgaactgagcttataccccttcacttcatcctctctaaggacagacttccag
gcgtcgtcagtgctggctcggcgccccctgctggccagtgtatgtgtgtgtttggtgtta
gccgtgggctgttgttctatgagggactgtgtgagagctaaaccctggctagggcttttg
gctctgctgtctatcgccctctctggtctcactgctgctggcatccttaacctgactgga
accacttacaactcaacctacttgggggtaccattcatactgctgggtcacggactgttt
ggcacatttgagatgctatcgtcatggagaaggacacgtgaggaccaacatgttaaggag
cgtgtagctagcgtattctctgatgtcatgctgcgttactcaggagctacactgctacat
caggtgtctctgggtctggctgcgtctcctctgaccaacctggaggctgtccggctgttc
tgtcgctgcgctgcattgggcgtaaccgttggttacctttacaccttgtccttctacgcc
acctgtctggttgccacaggttacctggagacagggtacagacacgggtgtttctgtcgc
cgcgtccccaagaagggagcgctggacaccaagccacgctggtaccgctgtctcatgtac
acacgctaccaggacgagacacactcacaaactcactcacacacacccaactctacacac
acacacacacctaatgctgcgcacacctacacacatacagcgaatcctgcacactcacac
actcacacacacactcccaacaccacacacacacatgaccatacacctaacactacacat
gctcacacacacactcccaacactacacacatacatgctcacacacacattccaaataca
cacaccccaaccaccatctctgaactgcgaccccaggactcacacttgttgctaggctgc
gtgcagcgttgctatggagactggatcaccaacacctatgtgaagcccttcatggttctg
ctctacctcgtatacatctcctttggcctgatgggcttcctacaggtgagccagggctca
gagcccagttctctggttgctatggatacagggacattgttgtatgctcgcgcccagcag
cgctacttctcctcctactctcctgtgattggcttctatgtctatgagagcgccccctat
tggaacacctcggtacagcgagacctgctggagtacgctaaagggttccagcgaatcagc
tggctggaaagctacctggattacctgacagaacggaacctctccactaccagccaatca
cgtgaaagctttacgcggatgctccgcctctccttccttcgccagccgcaattcgctcat
tttgccgatgacatcatcttcgctgagcgcgatgaaggggaggagccagagatggcagcg
tcacgtgtcttcctggttgccaagacaacagagaacaagagggaggagatgtccgtccta
ttggacacactgagacgtctgtctctgacatcacgcgtccgctttctcatcttcaacccc
tccttcgtctacctggacaggtatgctacagcggtgagctctcctctgcgccactccctg
atggcggtgttgttcctgctgggtctgtcgtctctagcggtggtggagcccctagtggca
gtgtggctcagtctaaccctcctctctgtccagtttggtgttctgggcttcatgactctg
tggggcgtggagctcgactgcgtgtctgtgttatgtctgatttcagcactgggtcactca
gcagactgctgtggtcctctactggccaccttctcctctggccggggggacagccggacc
gtgtgggtcagactggcgttggagagacatggcgtcccctctctacagacgttgatctgc
tacactgcagcgctgctccctctggccgccgtccgctccaaccttacacgctcgctgttc
cgttgcctagtgctgacggcattctgttcagcgctccatgccttggccttcctgcccacg
ctgctcaccttcctgccacccgccaagaagacaggaagtagacagggagacagaggggaa
ggggaggggcttagagaggaagtggagtgtgtggagatggttgacagcaccagggtggtc
gaccagatcaccaccgtctga
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