Oncorhynchus mykiss (rainbow trout): 110489550
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Entry
110489550 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor beta activator LRRC33-like
KO
K26317
transforming growth factor beta activator LRRC33
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110489550
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
110489550
NCBI-ProteinID:
XP_021417948
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All DBs
Position
15:complement(8418114..8422023)
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AA seq
710 aa
AA seq
DB search
MFIHGLLPTLLCLTLWPLWSLLMSAFCHPLHSPCRLTQKTALCSNSELSSVPGGLPDSIE
DLHLNHNHIQMLQDDSLSRYVSLRTLSCADNLLETVGSKLFHNSPHLESLNLAANNLHVG
YQQTSLALLTLSRLRVLDLSKNQLTEDMVSVLLQNMTSLEYLNLSRNLLLRLDESSFSDL
HQLRELDLQRNMLFEIDGSFDHLHKLQRLNLAFNYLPCLVHFHMTQLVVLNASHNAIEWF
IANQDLQEVFQLETLDLTDNNLLFFPFLPTHSRLRNLHLSQNRVSFYEHLADAAAYPNWK
TSVQFYNLRGNMSNVTAKLWDESLHGDISSLDLLDLSGNQVHYFPQGFISKMPSLTRLRM
WTNCLEVLNLTLEKLPGTLYELDVSNNRLTALHADQVSLRKLGNLSFLNLSQNDLQTLPA
QLLSSLTSISSVDISYNRVGVCPHEAGGSGMGGGNQSDCVVWRNIISLRYLYLSGCNLGR
LPSSAFVGTPLTHLELSNNPELIIGPRSIAGLSRTLHHLGLGNTGLRHFDFSPFHHLKSL
NISRNSLTQLPASLQRLELKLLDLRDNKLTTVPSAQANVLATKLHAVFLNGNTFNCCQLD
WYRTLEKTVTIMDLSDISCQDLTKRTHRVVLVDSLLCGGSEGESVYWYILLFIVPVLCLV
GMSVIFLLTFRPRLLPTAVRNKCWSQLPCVDEEKSQKEDPGRVQIPILEI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcatccacggcctcctccctaccctgctctgtctaaccctctggcccctgtggagc
ctcctgatgtctgccttctgccaccctctccacagcccctgcagactgacccaaaagact
gctctctgtagcaacagtgagctctcatctgtacctgggggcctacctgacagcatagag
gacctccacctgaaccacaaccacattcagatgctacaagatgactccctctcccgctac
gtctcccttcgtaccctaagctgtgcagacaaccttttggagacggtggggtccaagctc
tttcacaactcacctcatctagagagcctcaatctagctgccaataatcttcacgttgga
taccagcaaactagcctggcgctgctcaccttgtctagactcagagttctggatctgtca
aaaaatcagcttacagaggacatggtctccgtcctcctccagaatatgacgtccctggag
tacctcaacctttccaggaacctcctgctgaggctggacgaaagctccttcagcgacctc
caccagctcagagagctggacctgcagaggaacatgctgtttgagattgacgggtccttt
gatcacctgcacaagctccagagactcaacctggccttcaactacctgccctgcctggtg
cacttccacatgacccagctggtggtcctcaacgccagtcacaatgccattgagtggttc
atagccaaccaggacctccaggaagtcttccagctggagaccctggatctcacagacaac
aacctcctcttctttccctttctgcccacccacagccgcctgaggaacctccatctgtcc
cagaacagggtgagcttctacgaacacctggcggacgcagctgcctaccccaactggaag
accagcgtccagttctacaacctgaggggcaacatgagcaacgtcacggccaagttgtgg
gacgagagcctgcacggggacatctcctctctagacctgctggatctgagtggaaatcag
gtgcactacttcccccaaggattcatcagcaaaatgccaagcctgaccagactcaggatg
tggacaaactgtcttgaggtcttgaatctaactctggaaaagctgccggggacgttgtac
gagttggacgtgagcaacaataggttgactgcgctccatgccgaccaagttagtttgagg
aagctaggcaacctaagcttcctgaacctgagccagaatgacctgcagactctacctgct
cagctgttgtcctctctcaccagcatcagctctgtggatattagttacaacagagttggc
gtgtgcccccatgaggcagggggtagtggcatgggtgggggtaaccaatcagactgtgtc
gtttggagaaacatcatttctctgagatatctctacctatcagggtgcaacctggggagg
ctgccatcatcagcgttcgtagggacgcccctaacacacctggagctgtctaacaaccca
gaactcatcatcgggcccagatcgatcgcaggcctcagcagaactttgcaccatctagga
ttgggaaacacaggcctgaggcactttgacttctctcctttccatcacttgaagtctttg
aacatttccagaaactctcttactcagctccctgcttcactgcaacgcctggagctgaag
ctgctggacctgagggacaacaaactgaccaccgtcccctcagctcaggctaacgtgtta
gccacgaaactccacgccgtttttctcaacggaaacactttcaactgctgccagttggac
tggtacaggacgttggagaaaacggtcactatcatggacctctcggatatttcatgtcag
gatctgaccaaaagaacacacagagtggtgcttgtagactccctactatgtggcggtagt
gagggggagtctgtgtactggtacatcctgctgtttatcgtacctgttctctgtctggtt
ggaatgtctgttatcttcctgctcacctttaggcccagactgcttcccacagcagttaga
aataaatgctggagtcaacttccctgtgttgacgaagaaaagtcccaaaaagaagaccct
ggtcgtgtccaaatacccatactagagatctaa
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