Oncorhynchus mykiss (rainbow trout): 110489583
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Entry
110489583 CDS
T07259
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110489583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110489583
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110489583
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
YcaO_C
Nup49_C
PSY3
FapA
Motif
Other DBs
NCBI-GeneID:
110489583
NCBI-ProteinID:
XP_036799596
UniProt:
A0A8C7QLZ5
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Position
15:complement(11539629..11557471)
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AA seq
562 aa
AA seq
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MSGFNFGSGSTNTGGGFSFGGTASTPAAAVMGGFTLGGTASTTTTSSLGLGGSLFAQKPT
GGFSFNTPASGAPAASTTGFSMAFNKPSASAQPFSLTAASSAPSGAGLTLGSVLTSTAPQ
QGATGFALNLGGVAPSTGLSLGSSMFSNMTSTGLAQTTLGSGGLTLGSLVSTSTAISTAP
SLGLGGVDFSTSSEKKSDKSLGASPQDSKALKDENLPPVICQDVDHFQKFVKEQKQVHEE
ISRMSSKAMLKVQDDIRSLKQLLSVSASGLQRNALAIGHLKMEAALELKNADIALRTQKT
PPGLQHENTAPYDYFRCLVDQFEVQLQQYRQQIEELENHLSTQGSGSHITPQDLSLAMQK
LYQTFVCLAAQLQSVHENVKILKQQYLGYRRAFLEDSTDVFESKRAASKKWKSAPRITIG
PAPFGSVPNAAAVAMAATLSQQQPGPGRQAPLGSGLGNPFASGVGSSTGSSGLGVFGGGP
GFGGVATGGSFGFSSASKASGGSLSAGFGSSSSSGFNFSNPGLNASAGLTFGVSNPTATG
FGTGGPLLQLKKPPVGNKRGKR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcgggtctggatccacgaacaccggcggagggttttcgtttgga
ggcactgccagtaccccagctgcagcagttatgggtggctttactctggggggtacagcc
tccaccaccaccacctcttctctgggcctgggggggtccctgttcgctcagaaacctact
ggggggttctcctttaacactcctgcctcaggtgccccagcagcctctaccacgggcttt
agtatggccttcaataaaccatctgcctcggcccaacccttctccctcactgctgcctcc
tcggccccctcaggggcaggactgacgctaggctccgtcctcacctccaccgctccacaa
caaggagccacaggatttgctctcaacctagggggtgtggccccatccacaggtctatcg
ttgggttccagtatgttctctaacatgacttctactggtttggcccagaccactcttggt
tcagggggtttgacgttaggttccctagtctctacttcgacggcgatctcaacagccccc
agccttggacttggcggagttgacttcagcacttcctcagagaaaaagagtgacaaatca
ttaggggccagcccacaggacagtaaagcgttgaaagatgaaaacttgcctccagtcatc
tgtcaggatgtagaccatttccagaagtttgtgaaggagcagaagcaggttcacgaggag
atcagcaggatgtcatctaaagccatgctgaaggttcaggacgacatcaggagtctcaaa
cagctgctgtctgtcagcgcctcgggactacagagaaacgccctggctataggtcacctg
aagatggaggctgcgctggagttgaagaatgcagacatagctctacggactcagaagaca
ccccctggactccaacatgaaaacacagctccctatgattatttccggtgtttagtggat
cagtttgaggtccagctgcagcagtacagacagcagatagaggagctggagaatcacctc
tctacacagggcagtggatcacacatcacaccacaggatctgtctctggccatgcagaag
ttgtaccagacgtttgtttgtctggctgcgcagctccagtcagtacacgagaacgtcaag
atcctgaagcagcagtacctgggataccgccgggccttcctggaggactccactgatgtt
ttcgagtccaagcgggcggccagtaagaagtggaagagcgccccacgcatcacaatcggt
cccgccccgttcggcagtgtccctaacgcggcagcggtcgccatggcagccacgctgagc
cagcagcagcccggcccagggagacaggcgcccctggggtctggcttgggaaaccccttt
gcctcaggagtgggctctagcacgggctcttcaggccttggagtatttggtgggggtcca
ggtttcgggggggttgcgacggggggctcatttggtttctcctccgccagcaaggcctcg
ggagggagcctgagcgcaggttttggtagcagcagtagttcggggtttaacttcagtaac
cccgggctcaacgcatctgccggcctgacgtttggagtgtccaaccctaccgccacgggc
ttcggcacgggaggtcccctgctacagctcaagaagcccccggtgggaaacaagaggggc
aagagatag
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