KEGG   Oncorhynchus mykiss (rainbow trout): 110489630
Entry
110489630         CDS       T07259                                 
Name
(RefSeq) B-cadherin isoform X2
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371  Apelin signaling pathway
omy05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    110489630
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    110489630
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Cadherin_4
Other DBs
NCBI-GeneID: 110489630
NCBI-ProteinID: XP_021418079
Ensembl: ENSOMYG00000013357
LinkDB
Position
1:15508762..15521789
AA seq 603 aa
MSYDITIFLIWGWALGRMSETLQSEGFGHEDAGIASQPKYPASLPVLEFPKPLVGLVRRK
RDWVIPPINFPENSRGPFPEHMVQFRSNNDKEVKILYSITGSGVDQPPVGLFTVDKNSGF
LYVTQPLDRERKNHYVLLARAVAVGAGIAEDPMEIIVKVIDMNDNKPVFTQDPFTGIVPE
ASLPGFEVMEVTATDADEPGSANSDVRYTIINQEPELPSRNMFFINPVTGGIRVNAAGLD
RENIPKYTLEIQAADMEGNGLSCFGKSIITVTDSNDIAPQFEKSSNTVSVPENKVNALVV
KMPVSDGDEPHSSNWATKYRIVDGDPGRMFTVNTGPSRLEGIITTAKPLDFEKDNRYTLL
VTVENEVPFATPLPTSTSTVQVNVEDRNDAPVFDPVEKVVSISEHLPVDSDLVLYTAIDP
DIMAHKLMYRMDRDPAKWLDINSETGMIKTKHSLDRESPFAKDGKYRVLILAIEDEIPAT
GTGTILIELEDVNDNAPTIDDTPLKLCNQDPRLVRLAVTDRDGPGFAEPFSVELLEGSNM
YCAAQMDETGTVVELTFKAMREQRNFYINLRVTDAGGLKQDHVIHVTMNEDSCMTWGDFC
VRS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtcatatgacattaccatcttcctgatctggggttgggccctggggagaatgtctgag
actttacagtcagagggctttggccatgaggatgctggcattgcctctcagcctaaatat
cctgcaagtcttccagttctggagtttccaaagcctttggtaggtctggtgagaaggaaa
agggattgggtcattcctcccatcaacttcccagagaactcaagaggccctttccccgag
catatggtgcagtttagatccaacaatgataaagaggtgaagatcctgtacagcatcact
ggttctggagtagatcaaccccctgtgggactgttcactgtggacaaaaactctgggttt
ctctatgtgacccagcctttggacagagagagaaaaaaccattatgtgcttttggctcgt
gctgttgcagttggtgcgggtatagcagaagatccaatggagattattgttaaagtaatt
gatatgaatgacaacaagccagttttcacccaagatccttttacagggattgtcccggaa
gcatccctaccagggtttgaggtcatggaggtcacagccaccgatgcagatgagcctggc
tcagccaattctgatgtcagatacactattataaatcaggaacctgagctgccgagtcgc
aacatgtttttcatcaaccctgtcacaggagggatccgggtcaatgctgctggactggac
agagagaatattccaaaatatacattggaaatccaagctgctgatatggagggcaatggt
ctgtcatgtttcggaaaatccataattactgtaacggacagcaatgacatagctcctcaa
tttgagaagtcttcgaacacggtgtctgtcccagagaacaaagtgaatgccctggtggtc
aaaatgccagtgagtgatggagatgagccacactcttccaactgggccaccaagtacagg
attgtagatggagacccaggtagaatgttcactgtaaacactggacctagtagactggaa
ggaatcattaccacagccaagccccttgactttgagaaggacaatcgctacaccctgttg
gtgactgtggagaatgaggtcccatttgccacccccctgcccacctccacctccacagtc
caggtgaatgtggaggataggaatgatgcccctgtctttgacccagtggaaaaggttgtt
tctatatctgaacacctgccagtggacagtgatttggttctgtatacagccattgatcca
gacatcatggcacataaactcatgtatcgcatggacagagatcctgctaaatggctggac
atcaacagtgagaccggaatgatcaaaaccaaacactccctggacagagagtctcccttt
gccaaagatggcaaatacagagttctcattctcgccatcgaagatgaaatccctgcaact
ggaactggaaccattctgatagagctggaagatgtaaacgacaatgctccgactattgat
gacaccccgttgaagctctgcaaccaagacccccgtctagtgcgtttggctgtgacagac
agagacgggccaggctttgctgaacccttcagtgtagaacttctggaagggtccaatatg
tattgcgctgcccaaatggacgaaacaggaactgtggttgaattgacattcaaggccatg
agggagcagagaaacttctacattaatctgagggtcactgatgctggcgggctgaaacaa
gaccatgtcattcacgtcaccatgaatgaggacagctgcatgacctggggggatttctgt
gttagatcctga

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