Oncorhynchus mykiss (rainbow trout): 110489630
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Entry
110489630 CDS
T07259
Name
(RefSeq) B-cadherin isoform X2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
omy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110489630
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110489630
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110489630
NCBI-ProteinID:
XP_021418079
Ensembl:
ENSOMYG00000013357
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Position
1:15508762..15521789
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AA seq
603 aa
AA seq
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MSYDITIFLIWGWALGRMSETLQSEGFGHEDAGIASQPKYPASLPVLEFPKPLVGLVRRK
RDWVIPPINFPENSRGPFPEHMVQFRSNNDKEVKILYSITGSGVDQPPVGLFTVDKNSGF
LYVTQPLDRERKNHYVLLARAVAVGAGIAEDPMEIIVKVIDMNDNKPVFTQDPFTGIVPE
ASLPGFEVMEVTATDADEPGSANSDVRYTIINQEPELPSRNMFFINPVTGGIRVNAAGLD
RENIPKYTLEIQAADMEGNGLSCFGKSIITVTDSNDIAPQFEKSSNTVSVPENKVNALVV
KMPVSDGDEPHSSNWATKYRIVDGDPGRMFTVNTGPSRLEGIITTAKPLDFEKDNRYTLL
VTVENEVPFATPLPTSTSTVQVNVEDRNDAPVFDPVEKVVSISEHLPVDSDLVLYTAIDP
DIMAHKLMYRMDRDPAKWLDINSETGMIKTKHSLDRESPFAKDGKYRVLILAIEDEIPAT
GTGTILIELEDVNDNAPTIDDTPLKLCNQDPRLVRLAVTDRDGPGFAEPFSVELLEGSNM
YCAAQMDETGTVVELTFKAMREQRNFYINLRVTDAGGLKQDHVIHVTMNEDSCMTWGDFC
VRS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgacattaccatcttcctgatctggggttgggccctggggagaatgtctgag
actttacagtcagagggctttggccatgaggatgctggcattgcctctcagcctaaatat
cctgcaagtcttccagttctggagtttccaaagcctttggtaggtctggtgagaaggaaa
agggattgggtcattcctcccatcaacttcccagagaactcaagaggccctttccccgag
catatggtgcagtttagatccaacaatgataaagaggtgaagatcctgtacagcatcact
ggttctggagtagatcaaccccctgtgggactgttcactgtggacaaaaactctgggttt
ctctatgtgacccagcctttggacagagagagaaaaaaccattatgtgcttttggctcgt
gctgttgcagttggtgcgggtatagcagaagatccaatggagattattgttaaagtaatt
gatatgaatgacaacaagccagttttcacccaagatccttttacagggattgtcccggaa
gcatccctaccagggtttgaggtcatggaggtcacagccaccgatgcagatgagcctggc
tcagccaattctgatgtcagatacactattataaatcaggaacctgagctgccgagtcgc
aacatgtttttcatcaaccctgtcacaggagggatccgggtcaatgctgctggactggac
agagagaatattccaaaatatacattggaaatccaagctgctgatatggagggcaatggt
ctgtcatgtttcggaaaatccataattactgtaacggacagcaatgacatagctcctcaa
tttgagaagtcttcgaacacggtgtctgtcccagagaacaaagtgaatgccctggtggtc
aaaatgccagtgagtgatggagatgagccacactcttccaactgggccaccaagtacagg
attgtagatggagacccaggtagaatgttcactgtaaacactggacctagtagactggaa
ggaatcattaccacagccaagccccttgactttgagaaggacaatcgctacaccctgttg
gtgactgtggagaatgaggtcccatttgccacccccctgcccacctccacctccacagtc
caggtgaatgtggaggataggaatgatgcccctgtctttgacccagtggaaaaggttgtt
tctatatctgaacacctgccagtggacagtgatttggttctgtatacagccattgatcca
gacatcatggcacataaactcatgtatcgcatggacagagatcctgctaaatggctggac
atcaacagtgagaccggaatgatcaaaaccaaacactccctggacagagagtctcccttt
gccaaagatggcaaatacagagttctcattctcgccatcgaagatgaaatccctgcaact
ggaactggaaccattctgatagagctggaagatgtaaacgacaatgctccgactattgat
gacaccccgttgaagctctgcaaccaagacccccgtctagtgcgtttggctgtgacagac
agagacgggccaggctttgctgaacccttcagtgtagaacttctggaagggtccaatatg
tattgcgctgcccaaatggacgaaacaggaactgtggttgaattgacattcaaggccatg
agggagcagagaaacttctacattaatctgagggtcactgatgctggcgggctgaaacaa
gaccatgtcattcacgtcaccatgaatgaggacagctgcatgacctggggggatttctgt
gttagatcctga
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