Oncorhynchus mykiss (rainbow trout): 110489699
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Entry
110489699 CDS
T07259
Name
(RefSeq) interferon regulatory factor 8 isoform X1
KO
K04693
interferon regulatory factor 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217
Necroptosis
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04625
C-type lectin receptor signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110489699
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110489699
04621 NOD-like receptor signaling pathway
110489699
04625 C-type lectin receptor signaling pathway
110489699
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110489699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110489699
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110489699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
110489699
NCBI-ProteinID:
XP_021418146
Ensembl:
ENSOMYG00000012474
UniProt:
A0A8C7PTD2
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All DBs
Position
15:16120345..16125640
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AA seq
431 aa
AA seq
DB search
MASGKIRSTRRLRAWMVEQVSSGKYPGLIWDDDDKTMFRIPWKHAGKQEFRSEVDGAIFK
AWAVFKGKLSEGCHADPASWKTRLRVALNKSPEFREEPERSQLEISEPYKVYRLVPINEQ
ALGSVDMKVQARAGGRKRRSRDSDIEAEEEVVKVKQMKEVTTSLPITMSVQEIEESVLTI
QLDQVDQPSVMVKSAGTVNEIQVNFTIETVPPPGARDSFHVLVKYMGEEVLKRGVMGSDV
RIAYLPSSPVPPTLMVAGFPRIPLPDPPSTLTSSIGPQFQALSTLLPFMEKGVILTSTRT
GVYAKRYCQGQVFWTGPHSATAGPHKMNHAVEPVRLFDREAFRMELDHFSSHGGDPPQCG
FTLCFSDKEDPSSKLIITQITLPWAQQQVKEAEDFRESMAYFRNITSESGEVPINLVSGS
LLSEILGTSLP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggaaaattcgctccacacgcagactacgcgcttggatggtagaacaggtc
agcagtgggaagtaccctggcctgatatgggacgacgacgacaagaccatgtttcgtata
ccatggaaacacgctgggaaacaagaattccgcagcgaagtggatggtgccatcttcaag
gcgtgggcagtgtttaaggggaagttgtctgaggggtgtcatgcggaccctgcctcctgg
aagacgcggctgcgagttgctctcaataagagcccggagttcagagaggaacctgagagg
tcacagctggaaatctccgaaccatacaaagtctaccgcctcgtacccatcaacgaacaa
gcattggggagtgttgacatgaaggtccaagccagagcaggggggaggaagagaaggagc
cgcgattcagacatcgaggcggaggaagaggtggtgaaggtcaagcagatgaaagaggtt
accacctccctaccaatcaccatgtctgttcaggagattgaggaaagtgttcttacaatc
cagctagaccaggttgatcagccctcggtcatggtgaagagtgctgggacagtcaatgag
atccaggtgaacttcacgatcgagaccgtccctccccctggagcccgggactctttccat
gtcttagtgaagtacatgggagaggaggtgcttaaacgtggggtcatgggcagcgatgtc
cggatcgcctatctgccctcttcgcccgttccccccaccctgatggtggctgggttcccc
cgcatccccctgcccgaccccccttccaccttgacctccagcatcgggccccagttccag
gccctctccaccctgctgcccttcatggagaaaggggtgatcctgacctccacgagaaca
ggggtctatgctaagcgctactgccagggccaggtgttctggacagggccacattcagcc
acggcgggaccgcacaagatgaaccatgctgtggagcccgtgcggctcttcgatagagag
gctttcagaatggagctagaccacttcagcagccacgggggagaccctcctcagtgtggc
ttcaccttgtgtttcagtgacaaagaggacccatccagcaaactcatcatcacacagata
accctaccctgggctcagcagcaggtcaaggaagctgaagacttccgagagtcaatggcc
tacttccgcaacataaccagcgaatcaggagaggtccccatcaacctggtatcaggttca
ttgctatccgagatccttgggacgtccctaccttaa
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