Oncorhynchus mykiss (rainbow trout): 110489703
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Entry
110489703 CDS
T07259
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110489703
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110489703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
110489703
NCBI-ProteinID:
XP_036799774
LinkDB
All DBs
Position
15:16229826..16311786
Genome browser
AA seq
1832 aa
AA seq
DB search
MSRRKQPNPNKVKLMESATEDKRPGGGVSAELSTVETEHSEGQETPDSTHTQDEHTGSNG
AMEEGEEEDENGENMTEGVDLSSINAMLSTVMNAGQLNGAMEPSSAPASTASISISKTTP
PRPTSVNRNARRNTEAKDINTDFICPLCDKDCMTQHQLTMHIRQHNSDNGATDHSCSICG
KALSSASSLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVIPISPPSPT
KRRRPSAKRRSAMDEDTERGDELPNKKVLEESVLEELGSGQGDDEVLPCPICFKTFGCKY
DLEVHMDTHPDTTLRCDLCCLSFRTHRGLLRHNAGIHKKMPTDPGGRPFIQNNPSIPSGF
NDLAFIDFSCRKFSHIAQVWCETNLRRSTSKFHRFVCEACDKAFPLHSALDLHKTTIHQQ
QPSPVGGGQEVQEKPTTPPPQQASFLESLGLQHISQVKPQPSEDEVRQAQLDSIRVIQVE
PPDSTLPQEAASTASGFLGGLGLVAASSLQGLSQREALSLFSLQPFPTGFLFQSDSSTAV
KPVCGEAGLIELADIQQILKVALAAPGQMGLLPTLAKAPHQGVSGQAQAASCKPMPPLKP
KPMVAPRSSPAASTPPPLQSTQQASLGCISPSLPPPPSQLLNMPQESSSSSSSSSSSSGS
QASLEKMQMEADCMGDAHMPNDLTELQIKQEEGQAAGGKKGSGGANRGGAKASYPCRFCD
QVFAFSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRVCHYPFT
VKANCERHLRKKHMKNTRKEIEKNIKYVSSTTTQDPLELVAAGDTACRFCGEDLKSYRAL
QIHLRTHNGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLPAITAS
TSRASPSNPLALNGLTPNPTATLQPVKVEDLSIYSSSGDLDQPLDFSNKSRGTSSTAGSL
TGSPGIKLETVSPAAYDCSMEPIDLSIPKNPSKRLKTDTTAVVPVSVERREIKKELPFPS
VLDHLPSALQLDKSTEEKLTTPQSGSYQLPPVTPSPFPIGTTTGRALRLKPLLPKPASTS
SSCSLKELPPLASIAQIISSVSGAPDLLKREPDNKAPAALNGLQTEPDRPAGGDNSSETS
MEELPLEGLSRKRTRKKPVSQAKTMAPACVSTLEQNTGSGLDLESSGEFASVEKMLATTD
ANKFSTYLQTGVAELGRRNEGRQSPGEEKEEKESPPQSVPPQSKGGKKNAYSNSVQKMTC
PFCPRVFPWASSLQRHMLTHTVFSNVLSATGQKPFPCPKCDAFFSTKSNCERHLLRKHGV
TNRSLRRNGQVSKNGDEGSHDSAESSENEQTAGEVLDLSSMDPDQKGDAYESPNADQTPD
IAEQLLGEMEPQPSNNKTNNNYENEDYDDNDSQSNKSLDLNFASKLIDFKFSSDGEQPQT
SLGGERVVVAEPERVMDVQQQDQESSKYTCKNCKKNFRYAATLARHEKAHLCESAPPEEA
CGTEGTGLGTELPNATTATTEEEDQEEEGEKEAPESEGAGSVMDSGSEEEEKEKEERSDE
EGGLAEPKNGEGEVGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPYKCQTC
ERTFTLKHSLVRHQRIHLKPRGSDGADANGAEAPAGDSASEEGECTPTSTCPPSENESEG
TGVAREGAEKEAPLPGSTSPDQSLSTTEPAQSESATEAVAELLIKPASEPGSEPVLDPSV
EQASDNVSEIAVDLAAVESASITASTTATEPATETPKESSTESPTPQPSDVTPEKDPEGP
SEGFIQGLLEIHTKPPREFILPAGEASLVGVE
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgtaagcagcccaaccccaacaaagtcaaactgatggagagcgccacagaa
gacaagcgtccggggggaggggtgagcgctgagttgagcactgtagagactgagcactct
gaggggcaggaaacccccgactccacacacacacaggacgagcacacagggagtaatgga
gctatggaggaaggagaggaggaagatgaaaatggagagaatatgacagagggcgtggac
ttgtcatccatcaatgccatgctgtcaacggtgatgaacgcaggccagctcaacggcgcc
atggagccctcctcagcccctgcctcaacagcttccatctccattagcaagaccacccca
cccagacccactagtgtcaatcgcaatgccaggagaaacacggaagccaaagacatcaat
acagatttcatctgtccgctgtgtgacaaagactgtatgacccagcaccagctcactatg
catatccgacagcacaactcggacaacggggcgacggaccactcatgcagcatctgtggc
aaggccctgagctcagccagctcgctggaccgccacatgctagtccacagtggagagagg
ccctacaagtgctccttctgcggccagaccttcaccaccaacggcaacatgcacagacac
atgaagatccacgacaaagacccagccggcgtcattcctattagccccccctcgcccacc
aagagacgccgcccctccgccaagaggaggtcagccatggacgaggacacagagcgaggc
gacgaactgcccaacaaaaaggtgctagaggagagtgtgttggaggaactgggatcaggc
cagggggatgatgaggtgttgccgtgcccgatctgcttcaagacctttggctgcaaatac
gacctggaagtccacatggacacacaccctgacaccactctcaggtgtgacctgtgctgc
ctctccttccggacccaccgcggcctgctgcggcacaacgccggcatccacaagaagatg
cccacggaccccggcggacggcccttcatccagaacaacccctccatcccctctggcttc
aacgacctggcctttatcgacttctcctgccgcaagttttctcacatcgcccaggtctgg
tgtgaaaccaatctccgccggtccaccagcaagttccaccgttttgtgtgcgaggcctgc
gacaaggccttccccctacactcggccctagacctgcacaagaccaccattcatcagcag
cagccgtcgcccgtagggggcggccaggaggtccaggagaagccgacaaccccgccccct
cagcaggccagcttcctggaatccctgggtctgcagcacatttcccaggtcaagcctcag
ccttctgaggatgaggtccgtcaagcccagctggacagtatccgggtcatccaggtggag
cctccggactccaccctgccccaagaggcggcttccacagcttctggatttctgggcggc
ctgggcttggtggctgcttcgtccctgcagggcctgtcccagagggaggccctcagcctg
ttctccctgcagcccttccccacaggcttcctgttccagtcggacagtagcaccgctgtc
aagcctgtctgtggcgaggctggcctaattgagctggctgacatccagcagatcctgaag
gtggccttggccgcccccggtcagatgggcctcctgccgacactggccaaggccccgcac
cagggagtgtccggccaggcccaggcggccagctgcaagcccatgcccccgctgaagcca
aagcctatggtggcaccgcgctccagcccggctgcctccacgccaccgccgctccagagc
acccagcaggcttccctgggctgcatcagccccagcctgcccccgccgcccagccagctg
ctcaatatgccccaagagtcttcatcatcatcatcatcatcctcctcttcctcgggcagc
caggcctccctggagaagatgcagatggaggcggactgcatgggcgatgcccacatgccc
aacgacttgacggagctgcagatcaaacaagaggagggccaggcggccgggggaaagaag
gggtcaggaggggccaaccgcgggggtgctaaggcatcctacccctgccgtttctgtgac
caggtgtttgccttctccggggtgctgcaggcgcacatgcgcttccacctgggcatacta
ccgcaccagtgcaacatctgtgactacgtcgcacccgacaaggccacgctcatccgccac
ctgcgcacgcacagcggcgagcgcccctatgtgtgccgcgtctgccactaccctttcacc
gtcaaggccaactgcgagcgccacctgcgcaagaagcacatgaagaacacacggaaagag
attgagaagaacatcaagtacgtctcgtcaaccaccacccaggatcctttggagctggtt
gctgctggcgacaccgcctgccgcttctgcggtgaggatctaaagagctaccgggctctc
cagatccacctgcgcacccacaacggctgccagcgcaagccctttgagtgccggcggtgc
ggggcggctttcctggccaagaggaactgcatccaccacatgctcaagcagcacccagag
gtgcaggagcgggagatcgaggagcacatcgccacccttctccccgccatcacagcctcc
acctccagggccagtcccagcaaccctctggctctcaacggcctcacgcccaaccccact
gccaccctgcagccggtcaaggtggaggatctcagcatctactcctcctctggtgacctg
gatcagcccttggacttctccaacaagagccgcgggacaagcagcactgcgggtagcctg
accgggtctcctgggatcaaactggagacggtcagcccagcagcttacgactgctccatg
gaacctattgacctgtccatccccaagaaccccagcaagaggctgaagacagacaccacc
gctgttgtcccggtgagcgtggagcgcagagagatcaaaaaggagctgcccttccccagc
gtactggaccacctcccctcagcccttcagctggacaagagcactgaggagaagctgaca
accccccagtctggctcttaccagctccccccagtgaccccctccccgttccccattggc
accaccacaggccgggcgctccgtctcaagcccctactgcccaaaccagcctctacctcc
tcatcctgctctctgaaagagcttccccctttggcttccatcgcccagatcatctcctct
gtctcgggggctccagacctactcaagagggagccagataacaaggctcctgccgccctc
aacggcctccagacagaaccggaccgtccagctgggggtgacaacagctcagaaacatcg
atggaagagctccccctagagggcttgtccagaaagcgcactagaaagaagccagtgagc
caggccaagactatggcacctgcctgtgtgtccacgctcgagcagaacacaggcagcggc
ttggacctggaatccagtggtgagttcgccagcgtggagaagatgcttgccaccaccgac
gctaacaagtttagcacctacctgcagacgggggtggcggagctgggaaggcggaacgag
gggagacagagcccgggagaggagaaggaagagaaagagtcaccgcctcagtctgtgcca
ccccagtccaaaggagggaagaagaatgcctactccaactcagtgcagaagatgacctgt
cccttctgcccccgggtcttcccctgggccagctccctgcagagacacatgctcacacac
actgtcttctctaatgtgctgtcggctacaggtcagaagcccttcccctgtcccaaatgt
gacgccttcttctccaccaagtccaactgtgagcgccacctgctgcgcaagcacggcgtg
accaaccgctctctgcgccgcaacggccaagtatccaagaacggcgatgagggttcacac
gacagcgcagagagttccgagaatgagcagactgcaggagaggttttggatctgagcagc
atggaccctgatcagaaaggcgacgcatacgagtcgccaaacgcagaccaaacaccagac
attgctgagcagctgctaggggagatggaaccgcaacctagcaacaacaaaaccaacaat
aattatgaaaatgaagactatgacgacaatgattcacagagcaacaagagcttggacctc
aacttcgccagcaagctcatcgacttcaagttctcgtcggatggcgagcagcctcagacc
tccctgggtggagaaagggtggtggtggccgagccggagagggtgatggacgtccagcag
caggaccaagagtcctccaagtacacctgcaagaactgcaagaagaacttccgctacgcc
gccaccctggctcgccatgagaaggctcacctttgtgagagtgcaccccccgaggaggct
tgtggaacggaggggaccgggctaggcacagagctccccaatgctactacagccaccacc
gaggaggaggatcaggaggaggagggagagaaggaggctccggaaagcgagggagcggga
agtgtgatggacagcggctcggaggaggaggagaaagagaaggaggagaggagcgatgag
gaggggggcttggcagaaccaaagaacggagaaggagaggtgggaagagggtcgggaagc
aaagcagacaagaggaagaagatctgtaacgtgtgcagcaaacgattctggtcactgcag
gatctgaccagacacatgcgctcgcacacaggcgagagaccctacaagtgccagacgtgt
gagcgcaccttcaccctgaagcacagcctggtgaggcaccagcggatccacctgaagccg
cggggcagcgatggagctgatgccaacggggcagaggccccggccggagactcggctagc
gaggagggagagtgcaccccaaccagcacatgtcctccttcagagaacgagagcgagggc
actggagtggccagggagggagctgagaaagaggcccctctaccaggctccacatccccg
gaccagtccctgtccaccactgaaccagcccagtctgagtcagctacggaggccgtggct
gagctgctcattaagccagcctcggaaccaggctcggaacctgttctggacccatctgta
gaacaggcctccgacaacgtctctgaaatagctgtagatctagctgctgtagaatcagcc
tcaataacagctagtactacagccactgaaccagcaacagaaacccccaaagaatcctcc
acagagtcccccaccccacagccctctgatgtaaccccagagaaagacccagagggccca
tcggaaggcttcatccaaggcctactggagatccacaccaagcctccccgggagttcatc
ctacctgccggcgaggcttccttggtgggcgtggagtga
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integrated database retrieval system
