KEGG   Oncorhynchus mykiss (rainbow trout): 110489732
Entry
110489732         CDS       T07259                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110489732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110489732
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110489732
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 WDR54 Beta-prop_Vps41 RAWUL Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 110489732
NCBI-ProteinID: XP_021418240
Ensembl: ENSOMYG00000031750
LinkDB
Position
15:complement(18373431..18384106)
AA seq 683 aa
MATLHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKSECVLLQVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGT
IRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDLRVLICEE
KAPVLKMELDRSADPPTALWVSTTKSTVNKWSLKGIHNFRASGDYDNDCTAPLTPLCTQP
EQVVTGGASIIQCHILNDKRHILTKDTNNNIAYWDVLKACKGEDLGKMEFDEEIKKRFKM
VYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEY
WPRTHINPMDEETEMNHMNGEHESRIQKGNGYFHVPPHTPVIFGEAGGRTLFRLLCRDSG
GETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVR
KVMEHVYEKIINLDNESQTGASANNDKPSEQKEEEDVAVLAEEKIELLCQDQVLDPNMDL
RTVKHFIWKSGGDLTLHYRQKST
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggcgactcttcacaggcaaaatgctgctgggcggagaaaagtccaggtgtcctatgtg
attcgggatgaggtggagaagtataaccgcaatggggtgaatgctctgcagctcgacccg
gccttgaaccgcctcttcacggctggccgagactccattattaggatatggagcgtcaac
cagcacaagcaggacccgtacattgcatcgatggaacaccacacagattgggtcaatgac
atcgtcctctgttgcaatgggaagacattgatatctgcttcctcagacaccacagtgaaa
gtctggaatgcacataagggattctgcatgtccacattgcgaacacataaggactatgtc
aaagccttagcctatgccaaggacaaggaactggtggcctcagcagggctggacagacag
atctttctatgggacgttaacacactaacggcactgaccgcctccaataatactgtcacc
acctcttcactgagtgggaacaaagactccatctacagtctggctatgaatcagatgggc
accgtcattgtgtcagggtccactgaaaagagtgaatgtgtcctgctacaggtgctgaga
gtttgggatcctcgaacctgtgccaagctgatgaagttgaaaggtcacacagacaacgtt
aaatcattactgctaaacagggatggcactcagtgtctctcgggcagctcagacgggacc
atccgtctgtggtcgctggggcagcagcggtgcattgctacctaccgggtgcacgatgag
ggcgtgtgggccctgcaggtcaacgaagccttcacgcatgtctactccggcggacgcgac
cgcaagatctactgcaccgacctgaggaatccagacctccgcgttctcatctgcgaggag
aaagcccctgtcctcaagatggagctggaccgctcggcagacccccccacggccctctgg
gtctccaccaccaagtccaccgtcaacaaatggtctctgaagggcattcataatttccga
gcatctggcgattacgacaacgactgcactgctcccctgacgcctctctgtactcaaccc
gagcaggttgttacagggggagccagcattatccagtgccacattctgaacgacaagaga
cacatactaaccaaagacaccaacaacaacattgcatactgggatgttttaaaggcgtgt
aaaggggaagacctgggaaagatggagtttgacgaagagattaaaaagaggttcaaaatg
gtttatgtgccaaactggttctcagtggatcttaaaactgggatgttgaccatcacgctg
gatgagagcgactgctttgctgcatgggtgtcagccaaggatgcaggcttctccagtcct
gatgggtctgaccccaagttgaacctgggtggactgctgctgcaggccttactggagtat
tggccccgaacccacatcaaccccatggatgaagagacagagatgaaccacatgaacggg
gagcatgagagcaggatacagaaaggtaacggctacttccatgttccccctcacacgcca
gtcatctttggagaggcagggggaaggaccttgttcaggttgttgtgtcgagactccggt
ggtgagactgagtccatgttgctcaacgagaccgtgccacagtgggtcatcgacatcact
gtggataaaaacatgcccaaattcaacaaaatccccttctacctccagcctcattcttct
tctggtgcaaaaaccttaaagaaggaccgcctgtcggccagtgacatgctccaggtgagg
aaggtgatggagcacgtgtacgagaagatcatcaacctggacaacgagtctcagacgggg
gcctcggcaaacaacgacaagcccagtgagcagaaggaggaggaggacgtggccgtgctg
gccgaggagaagattgagctgctctgtcaggaccaggtattggatcccaacatggacctg
cggaccgtcaagcattttatctggaagagcggtggagacctaacccttcactaccggcag
aagtccacgtga

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