Oncorhynchus mykiss (rainbow trout): 110489742
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Entry
110489742 CDS
T07259
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110489742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110489742
03036 Chromosome and associated proteins [BR:
omy03036
]
110489742
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
110489742
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110489742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
SAM_PNT
DUF5431
Motif
Other DBs
NCBI-GeneID:
110489742
NCBI-ProteinID:
XP_021418269
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All DBs
Position
15:19402767..19546571
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AA seq
662 aa
AA seq
DB search
MMQAEDRKKRSFSKGVAEEYCLRERPNEDTVKMKNKVTSTQAVRGKKKAWSWDQYLGEKK
VIAAPLRLFTEAQSFPLSRNGFKVGMRLEGIDPLHPSMFCILSVAEVIGYRLRLHIDSYS
ECYDFWVNADSPDIRPAGWCESTGHQLHPPKGYNESEFNWEKYQEACNAEAAPKNLFKSQ
NGTTSTSKFQVGMKLEAVDRKNPCLVCVASVADIVDNHFLVHFDNWDDTYDYWCDASSPH
IHPVGWCQDHGRPLTAPQGHPNPEHFLWEEYLQDNGSTAVPSQAFCMRAPHSFQVNMKLE
VVDRRNPMLVRVATVSDTEDYRVKIHFDGWHEKFDFWVDSDLPDLHPVGWCARTGHPLEP
PLSHTGPSDLKSSVTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEAVLPDR
LGGEKQITFVPVHFVQKTKRLCTADEQEEATPQDTPMETRAMLSGYEEAGRLRGRPPANP
LVKREPREEPATAQGQKLLSLGKRSLPSRLSQSTKYLRVKEEEEEIDLNSMITEHSVDSL
QQALHQSVFLSAMSAHPGRDLPLCWEQHCKLLPGVAGVQASRVAHWTADEVADFIHSLHG
CDEQAKQFKEEQIDGKAFLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDNQSAAGNA
NT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggcagaggataggaagaaaaggagtttcagcaagggcgtggcggaggaatat
tgtctaagagagcgaccaaacgaggacactgtaaaaatgaagaacaaagtgacaagcaca
caagcagtgaggggtaagaagaaggcatggtcgtgggatcaatacctgggagagaagaag
gtcatagcagctcccctaagactcttcactgaggcccagtcgttcccccttagcagaaat
ggtttcaaggtggggatgaggctggaggggatcgaccctctgcacccctctatgttctgc
atcctgtccgtggcagaggtaattggttaccgattacgtctccacatcgacagctactca
gaatgctatgacttctgggtaaacgcagactctccggatatcaggccagccggatggtgc
gagtcgacaggacaccagctccacccaccaaaaggctacaatgaaagcgagtttaactgg
gagaaataccaagaggcttgcaatgctgaagctgcaccaaagaatctgtttaaatcccaa
aatggtactacgagcacctctaagtttcaggtgggcatgaaactggaggcagtggacaga
aagaatccatgcctggtatgtgtggcctcggtggccgacatcgtggacaatcacttcctg
gttcactttgacaactgggacgacacctacgactactggtgtgacgccagcagccctcac
atccacccagtgggctggtgccaggaccacggaagacctctcactgcacctcagggacac
cccaatccagaacatttcctgtgggaggagtacttacaagacaacggttccacggcggtt
ccaagccaggctttctgtatgagagcgcctcacagtttccaggtgaacatgaagctggag
gtggtggacaggaggaaccccatgctggtccgcgtggccaccgtctcagacactgaggac
tacagggtcaagatccattttgacggctggcatgagaagtttgacttctgggtggactct
gacctgccggaccttcaccctgtgggctggtgtgcccggacaggtcatcccctggaaccc
cccctttcacacacaggaccttctgaccttaagagctccgtgacccagggagtgtgcccc
actccgggctgcaggggtgtgggccacatcaaaggagccaaatacacaggacaccacagt
gccttcggctgtccctactccgacatcaacatgaagaaggaggctgtgctgcctgaccgg
ctgggcggcgaaaagcagatcacctttgtccctgtgcactttgtccagaagaccaagagg
ctgtgcactgccgacgaacaggaggaagccacgccccaggacactcccatggaaaccagg
gctatgttgtcagggtatgaggaggctggtcgtctgagaggacgacccccagccaacccc
ctggtgaagagagagccaagggaggaaccagccacagctcagggacagaagctcctctct
ctggggaagagaagcctacccagcaggctctcccagtcaacaaaatatctgcgagtcaaa
gaggaggaggaagagattgacttgaatagcatgatcacagagcacagcgtggacagcctg
cagcaggccctccaccagtcggtgttcctgtcggcaatgtcggcccaccctggccgggac
ctgcccctatgctgggagcagcactgcaagctgctgcctggagtggccggagtacaggcc
agccgtgtggcccactggaccgcggacgaggtggctgactttatccactctcttcacggc
tgtgatgaacaagccaagcagttcaaagaggagcaaattgacgggaaagccttcttgctg
ctgacccagcgcgacatcgtcaagatcatgagcgtgaaactcggtcctgccctcaagata
tacaactccatcctgatgttcaagcacgctgaggacaaccaatcggcagctggcaacgcc
aacacatga
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