Oncorhynchus mykiss (rainbow trout): 110489775
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Entry
110489775 CDS
T07259
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2-B isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110489775 (pabpn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110489775 (pabpn1)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110489775 (pabpn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110489775
NCBI-ProteinID:
XP_036799938
Ensembl:
ENSOMYG00000008474
UniProt:
A0A8C7P784
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All DBs
Position
15:20927320..20943689
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AA seq
286 aa
AA seq
DB search
MAEFGNGMDSGMTEESLLDSDPGHPELEDPGVGDEEPGLEEGEAAIEDPELEAIKARVRE
MEEEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEA
HFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAMALDESLFRGRQIKVGVKRTN
RPGISTTDRGFPRARFRSRGGNFNPSRARYYSGYTPPRGRGRAFRFQDQWRLTTPAPVAA
APPNVSAGSLSLTAPAMHTHPILSVWGGGGQGDHRATAGGIYYNKR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttcggtaacggaatggactcagggatgacggaagaatctctgctggactca
gacccagggcacccagaactagaagacccgggtgttggcgatgaggaacctggattagag
gagggagaggccgcgatcgaggacccggagctggaggcgatcaaagctcgggtgcgagag
atggaggaggaagcagaaaagctgaaggagttacagaacgaggtggagaaacagatgaat
cttagccctccaccagccggtcccgtcatcatgtccatcgaggagaaaatggaagctgac
gcgagatctatctatgttggaaacgttgattacggcgccacggcggaggagctagaagcc
cacttccacggttgcggctccgtcaacagagtcaccatcctgtgtgacaagttcacaggg
catcccaaagggtttgcctatatcgagttttcagacaaggagtctgtgaggacggccatg
gcattggacgagtctctgttcagaggaaggcagattaaggtgggtgtgaagagaacaaac
aggccaggtatcagcaccacagaccgcgggtttcctcgggcccgcttccgctcacgagga
gggaactttaacccgtcgcgcgcacgttactacagtggctacacaccgcccagaggcaga
ggacgggccttcaggtttcaggaccagtggaggctgacaacccctgctccggtggccgcg
gcgccccccaatgtctcggcagggtctctctctctcactgctcctgctatgcacactcac
cccatcctttctgtgtgggggggagggggccagggcgatcacagggctaccgcagggggc
atttactacaacaagcgttga
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