Oncorhynchus mykiss (rainbow trout): 110489816
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Entry
110489816 CDS
T07259
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110489816
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
Patched domain-containing proteins
110489816
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
YjcZ
Motif
Other DBs
NCBI-GeneID:
110489816
NCBI-ProteinID:
XP_021418416
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Position
15:23157957..23162305
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AA seq
836 aa
AA seq
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MPSCHTDCIEKSVSNWFHKLGGFVGRNPWWFLLVPLFISAGLGAGFYFLEEREAHGIEDQ
FTPKDGPAKQERHFVKEHFPQNDSEFSRLRLYNEGSYGSFIAVSKSSDILSEKAFEEIIY
LDGTVREMVGQKGKTYEKLCAMKSNRCFSNDMLDIINGTASTIKKANLTFPYHNSTSNTI
FLGTELGGVVLNSSIIVSAKAVRLFYFLRENNEAENDNWLHGFTQVFSNLSDELNKRQIQ
VSYFTSNSREEEFKENSKSVIPLFSVTYFLAISFSIVSCLRLDCVRNKVWVAIFGALSAG
LAVLSSFGLLLLCGMPFAMTVATAPFLILGIGVDDMFIMISCWQQTQVHDNVEDRMAATY
KEAAVSITITTLTDVLAFYIGLLTPFRSVQSFCMYTGTAVLFCYLYNITFFGAFLALNGS
REKGNRHWLTCMKVPEPEDSPEKYNICCVGGAYDQETGKEEVMPINNFFKMYYGPFLTNT
WTKVFVILLYAGYLGSSIYGCFQIQEGIDLKNLAADNSYVGSYYDNEDQYFSEYGPNVMV
VVTDSKFQYWDQTARKRLDTCLERFESLTLDGRSLVAKNMTLSWLNEYVKVINPNNKTIF
MDSLPAFLQRSDFTQDVNISNKVIIASRMFIQTINVSTAVDEKNMLNKLRETANGCSEKL
VVYHPAFIYFDQYAVIVSNTIQNIVVATLAMLVISLMLIPNPICSLWVTFAIASVIVGVA
GFMALWDVNLDSVSMINLVICIGFSVDFSAHISYAFVSSKEVTANKKAVDAVYHLGYPII
QGAVSTILGVVVLSVAESYIFRTFFKIMFLVILFGVLHGIVFIPVFLTFFGICNFN
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtgtcacacagactgcattgaaaaatcagtgtcaaattggtttcataaactt
ggaggttttgttgggagaaatccatggtggtttctacttgtccctttgttcatctctgcg
gggcttggggcaggattttacttccttgaagagagagaggcgcatggcatagaggaccag
tttactccaaaggacgggcctgcaaaacaggagagacattttgtcaaagaacattttcct
cagaatgattcagagttctctcgtttgcggctgtataacgaggggagctatgggtctttc
atcgctgtttcaaagtcatccgatatcttgagtgagaaggcatttgaggagatcatatat
ttagatggaacagttagagagatggtaggccaaaaaggaaaaacctatgaaaaactttgt
gccatgaaaagtaacaggtgcttttcaaatgacatgttagatatcattaatggcacagct
agtacaattaagaaggcaaacttgacctttccttatcataattcaacgtcaaacaccatc
tttttgggaacagaacttggtggagtagttttgaattcaagtatcatcgttagtgcaaag
gctgttcgactcttctactttctcagagaaaacaacgaggcagaaaatgataattggcta
catgggtttactcaagtgttttccaacttgtcagatgaattgaataagcggcagattcaa
gtttcatacttcacatctaattctagagaggaggagtttaaggaaaactccaaatctgtg
attcctctcttctccgtcacatacttcctggccataagtttttcaattgtatcttgcttg
aggttggactgtgtgaggaacaaggtgtgggtggccatctttggtgctctatctgcaggc
ctagctgtgctgtccagtttcgggttgttgctgctctgtggaatgccctttgccatgact
gttgcaacggctcctttcttaatactgggaattggtgttgacgacatgttcatcatgatt
tcctgctggcagcagactcaagttcatgacaacgtagaggaccgtatggcagctacatac
aaagaggcagctgtctctatcaccatcacaacactaactgatgtcctggccttctatatt
ggtctgttaactccctttcgttctgtacaatccttttgtatgtatactggcacagctgtc
ctgttctgttacttgtacaatattaccttctttggtgcatttctggcattgaatgggagt
cgtgaaaagggtaacagacactggctgacatgcatgaaggttccagaaccagaggatagt
cctgaaaagtacaatatctgctgtgtaggaggagcttatgaccaggaaacgggaaaagag
gaagttatgcccattaacaacttctttaagatgtactatgggccatttctaacaaatact
tggaccaaggtgtttgtgatcctgctctatgctggatatttgggctcaagtatctatgga
tgcttccaaatacaagaaggcatcgaccttaaaaacctagcagctgataactcatatgtg
gggagctattacgataatgaggaccaatacttttcagagtatggtccaaatgttatggtt
gttgtgactgacagtaagtttcaatattgggaccaaactgctcgaaagcgtcttgatact
tgtcttgaacgttttgagagtctaacgttggatggtcgatcattggttgctaaaaatatg
actctttcttggcttaatgaatatgtgaaagttataaatccaaataacaaaaccattttc
atggatagtttacctgcgtttttacaacgatcagacttcacacaagatgtgaatatttca
aacaaagtcataattgcctcgcgaatgtttattcagacaatcaacgtcagtacagctgtt
gatgaaaagaacatgttgaataagcttcgagagacagctaatggttgttcagaaaagttg
gttgtttaccaccctgctttcatatactttgaccagtatgcagtcattgttagtaatacc
atccaaaacattgtagttgccactcttgccatgctggtgatctccctcatgttgatcccc
aaccccatatgttctctgtgggtgacctttgctattgcctctgtcatagtgggtgttgct
ggtttcatggcattatgggatgtcaatctagactctgtatccatgatcaatcttgtcatc
tgcattggtttctcagtggatttttctgctcacatttcctatgcttttgtctctagcaaa
gaggtcactgctaataagaaggctgtagatgctgtctatcacttggggtatcccatcata
cagggagctgtgtctactattttaggagtggtggtgctgtctgttgctgagagctacatc
ttcagaaccttctttaagatcatgttcttggtcattttgtttggggtacttcatggcatc
gttttcatccctgtgtttctgaccttctttggcatatgcaattttaattga
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