Oncorhynchus mykiss (rainbow trout): 110489818
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Entry
110489818 CDS
T07259
Symbol
ptchd3a
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110489818 (ptchd3a)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Other domain-containing proteins
Patched domain-containing proteins
110489818 (ptchd3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
110489818
NCBI-ProteinID:
XP_021418420
Ensembl:
ENSOMYG00000022823
LinkDB
All DBs
Position
15:23204933..23211897
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AA seq
987 aa
AA seq
DB search
MPVFNMAGCRTDCVEKPFSIGFQKFGRFVGRHPWWFFICPLVISTALGTGFYFLEDMEAN
NIEDQFTPVNGPAKLERKFVEENFPLNNSVYSNQRLYTMGEFASFIAVSRDPNIFTNGAI
KEILSLDKKVREIKLSRGHEQLTYEGLCARKSNKCIPNKILDIMNHYGSNIDQTELTFPF
FRFGFTTIFLGYSVGGVNVSLTVIKSAKAIRLFYCLKEGNRSTTDLWLNEFLKVFPSNQS
LNFITVTHSTSLSRQVEFEANTRDVIPLFSITYVIAIVFSIVSCLRFDCVRNKVWVATFG
VLSAGLAVLSAFGMMLHIGVPFVMTVANSPFLILGIGVDDMFILISCWQQTNVHARVEDR
LADTYKEAAISITITTLTDVLAFYIGLMTPFRSVQSFCLYTSTAILFCFLYSITFFGAFL
VLNGRRENSNKHWLTCKEVPEDCPVGRSKWYDLCCVGGAYDRHTGAEEVQPMNHFFKKHY
GPFLVKPWTKVCVILLYSVYLSISIYGCFQIQEGIDLRNLAADDSYVNRYYDDEKAYFYE
YGPNIMVIIRGEFAYWEEKNMLDLESCVEDFKNLSFIEKDIFTSWLKSYKYYGYHTNLNL
SVENVFKTNLSSFLRSYSDFKQDVNFTNNSIRASRFFIQTVNITTAIDEMNMLNNLRDTA
RRCSVPLLVYHPVFIYHDQYAVIVSNTVQNISVTTAVMLLISLLLIPNPLCCLWVTFSIA
SVIVGVTGFMALWDVNLDTISMIILVVCIGFSVDFSAHISYAFVSNKKPTANEKAVEALF
HLGYPILQGALSTILGVIVLSASKNYIFRTFFKIMFLVIFFGLFHGITFIPVFLTFFDFF
SSNSGNVSPQEKRALENEAMTNCQLKNIQEKAIDHDKQIYDNHTFLPDNQQLFPTQACPS
VWTLTVNTHPTQSGQMCMASTVPMFRVDSQTYEVQMYTASNDAVTVNCNQNLGAGEHHCV
IGNNQPPVSQECNAPFINCSDSADPVP
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgccggtatttaatatggctgggtgtcggacagactgcgttgagaagccattctccatt
ggatttcagaaattcggccgtttcgtgggaaggcatccttggtggttctttatctgcccc
ctggtcatctctacagcgctcgggactgggttttattttcttgaggacatggaggccaac
aacatcgaggaccaatttacaccagtaaacggacccgcaaaacttgagagaaaatttgta
gaagagaactttccgctgaataactcggtgtattcaaaccagagactgtacaccatgggg
gaatttgcatccttcatagcggtctcaagagatcccaacatcttcaccaatggagccatc
aaagaaatattaagtttagacaagaaggtccgggaaataaaactttcgagaggtcatgaa
cagcttacatatgaaggactttgcgccagaaaatccaataaatgtattcccaataaaata
ttagatatcatgaatcattatggtagcaacattgaccagactgaactcacctttccattt
ttccgttttggattcacaacaatatttctaggatattctgtcggtggagttaatgtaagc
ttaacagtcataaagagtgctaaagcaatacgacttttttattgtctgaaagaaggtaac
cgctctacaacagatctgtggctaaacgaattcctcaaggttttcccctccaaccagtca
ctgaatttcatcacggttacacattctacatcactgtctaggcaggtggaattcgaggcc
aacaccagggacgttatccccttgttttccatcacatatgttatcgccatagtcttttcc
attgtgtcttgcttaaggtttgattgtgtgaggaacaaggtatgggtggccacctttgga
gtattatctgcagggctagcggtgctgtctgccttcgggatgatgctgcatattggagtg
ccttttgtaatgactgtggctaactcccccttcttgatattgggtattggtgttgatgac
atgttcatcctcatatcctgctggcagcagaccaacgttcacgcccgggtggaagaccgc
ttagcagatacatacaaggaggcagccatttccattaccatcaccaccctgacagatgtg
ttagcgttctacatcgggctcatgactccattccgctctgtgcaatccttctgcctgtac
accagcacggccatcttgttttgctttctttacagcatcaccttctttggggcgttcctc
gtactgaatgggaggcgtgagaacagcaacaagcactggctgacgtgcaaggaggtccca
gaggattgccccgtgggtcgctcaaaatggtacgacctgtgctgtgtgggaggagcttac
gaccgccatactggagcagaggaagtacagcccatgaatcacttttttaagaagcactac
ggcccttttctggtaaagccctggaccaaggtgtgcgtgatcctgctctattcagtgtat
ttgtccatcagcatttatggatgcttccagatacaggagggtattgaccttcgcaattta
gctgctgatgattcatatgtgaataggtattatgatgatgaaaaagcctacttttatgag
tatgggccaaatatcatggtaatcataaggggtgaatttgcatactgggaggaaaagaat
atgttggatcttgaatcttgtgtagaggacttcaaaaacctgtcctttattgagaaagat
atctttacatcctggctgaaatcgtataaatattatgggtaccatacaaatctgaatttg
agtgttgaaaatgttttcaagacaaacctaagttcgtttctgagatcctactctgacttc
aagcaagatgtaaatttcacaaataattccatccgtgcctcacgcttcttcatccagact
gtcaatatcactactgccattgatgaaatgaacatgttaaacaatctgcgagatactgct
aggagatgctctgtccctctactggtataccaccctgtctttatataccatgatcagtac
gctgtcatagtgagtaacaccgttcagaatatctccgtcaccacagcagtcatgttattg
atctccctcctactgattccaaaccctctctgttgtctgtgggtgacgttctccatcgct
tctgtcattgtgggcgttactggtttcatggcattgtgggatgttaatttagacaccata
tccatgatcattcttgttgtctgcattggattctccgtggacttctccgcacacatttcc
tatgcctttgtttccaataagaagccaactgcaaatgagaaagccgtggaagcgctgttc
catttgggctatcccatacttcagggtgctttgtcaaccatactgggcgtgatagtgctg
tctgcttccaagaactacatcttcagaaccttcttcaagatcatgttccttgtcatcttt
tttggactgttccatggcataacttttatccctgtctttttgacattctttgactttttc
agcagcaactcaggcaatgtcagccctcaggagaaaagggcgctggaaaacgaagccatg
accaactgccagctcaaaaacatccaagagaaagccattgatcacgacaagcaaatctat
gacaatcacaccttcctgccagacaatcaacaattattcccaacacaggcctgtccctca
gtctggacactgactgtcaacacccatcccacccaaagtggtcagatgtgcatggcaagc
acagttcccatgttcagagttgatagtcaaacatatgaagttcagatgtacacagctagt
aatgacgctgtcacggtcaattgcaaccaaaatctgggggctggtgaacatcattgtgtg
attggaaataaccaaccaccagtttcgcaggagtgtaatgccccgtttatcaattgctct
gattctgcagatcctgttccttga
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