Oncorhynchus mykiss (rainbow trout): 110489900
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Entry
110489900 CDS
T07259
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110489900
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
110489900
NCBI-ProteinID:
XP_036800050
LinkDB
All DBs
Position
15:complement(26975666..27077575)
Genome browser
AA seq
2087 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPKLRELWLDRNQLSSLPPELGNLRRLVCLDMSENRLEELPSELS
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNADRNRLGGVPDELGGCASLNVLSLRDNRVAKLPAQLADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDEESTGEKVLTCYLLPQQP
SSSLENLLQNSVDDSWTDSNLNRVSVIQFQEETTKQEAEDDEAAAERRGLQRRATPHHSE
LKVMKKGIEERRNEAYTSRADGETESPGAEEKRLSDLSNQSHDSAASNSTASANSHEERR
GLMTTDLVGGRGPQEVEVLDEMEVEYVEPTVHFAEEPMYRGGDENGDDDEEGEDGVPHSY
EEEQQRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPASHH
TAPEEEEEEEEDEEEEGEECMVTPQRHNRIEESELEDRSLLHANSSLQPVKGVSFDQVNN
LLIEPARIEEEEHNLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGV
KVGDKLLEVNGVALQGAEHHTAVEALRSSGTAVSMSVIREHMVEPENAITTTPLRPEDDY
FPRERRASGLPFCMEASSPAGPRHRRSTCLVRNDKGLGFSIAGGKGSTAYRTGDLGIYIS
RIAEGGAAHRDSTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGT
AGGSPGLSRARAHSPPPPEPSDSPDQEEGNDDSPHGTHLSRPLQDEYPIEEVMLVKAGGP
LGLSIVGGSDHASHPFGVSEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQE
AVKALLSNKQEIRMLVRRDPSPPGMQEIVIQKQTGEKLGISIRGGAKGHAGNPFDATDEG
IFISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLFMLVCDGFD
PGNAAAIEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMARETSQWE
REEVERMRLEREEATRLLEEETENLGTGPLNLDYRTLAALPTTALQKVNRFAPSVCVTAF
MEAPLQTQCSAPLEPLGFGLGQPSTSLYHVDPHALPQSCPTMITEAEHLYMSQHSPSPAI
TSFNQEAARQEAPPTGEDEEEEILVDSQPINFSENPFLVANRKGKGRPPSECILSGPPMG
YGSGGKLQPWLFSKAPSTEPPRTDSPIRDAPYSPSTQPPSAHSSTSSLCAGRETRFASIH
FPQSALPAKNNSPLSPYETRPGSIQPLSRGGGRPSTSPGTPDGHSRDGHSSPNPFQHGPS
PINSQTSLQPRAPSPDTIDEFSLNPKQAYKAFAAVPHSLAMLEPPLQDLYGQRNNIQSNL
PSPSLEPELNNEVFEDEVEGDGGLAAHVSPRPSLSSDRRDYMSLAAVPRLSRASMDMVVK
TPSPGGRDSPEQRSFRDRQKYFEIDMKQQTPDSKPKGRVSLVGADDLKKMREEEERRFEQ
RAREYLMDDDDEEDDDLVTQMGVLKATGKVLLDGVEYKVEPVATPPRHYNTPPSYSATPP
SYCGSSGPSSVDGKGDSQRNSLEESFRLDQQRPNSMTGLIPVYPGESGAPIRTAKAERRQ
QERLRMQSPELAPAGDKDLSPAEKRALEAEKRAMWRAARPYGLEEDVRQYEQDLAKRLYQ
SRVRASQGTVPPPQPQNAAASSAASQLRMKSLEQDALKAQMVIAKSREGKKRGTLDQLAE
SPSPAPTPSPTPLEDFSPRGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDTVDDF
QFIDDGSSNPVPAEVPTATSTLEEMALYRNKRKLRQGRRSLETAVPT
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgctgtaaccgccacgtcgagtcggtggacaagcga
cattgcaatttgcaaaatgtccctgacgagatattccgctacagccgcagtctggaagag
cttctcctcgacgccaaccaactcagagatttacccaagcctttctttagacttctgaac
ctgcggaagctgggcctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcgttggagattgcagacttcagtggaaaccccctctccaggttg
cctgatggtttcactcagctgcgagggctcgcccacctggccctcaacgacgtgtcactg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcgctctcttttctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagtgttgccagacacacttggtgctctccctaagctacgg
gagctgtggttggaccgtaaccagctctcctcattgccaccagagctggggaacctgcgg
aggctggtgtgtctagacatgtcagagaaccgcctggaggagttgccctcggagctgagc
ggcctgctggccctcactgacctgctgctcacacaaaacctcctggaggtggtccctgac
agcattggctctctgaagcagctgtccatcttgaaagtggaccagaaccgactgacccac
ctgagcgactccataggggagtgtgagaacctgacggaactcgtgctgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagctgaagaagctgaccaatctgaatgcggac
cgcaaccggctgggcggcgtgcccgatgagctgggcggctgcgccagcctcaacgtgctc
tccctcagggacaaccgggtggccaagctgcctgcccagctggccgacgctaccgagctc
cacgtgctagacgtggcagggaacaggttacagaacctcccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggatgaggagagcaccggggagaaggtgctcacctgctacctgctaccccagcagcct
tcctctagcctggagaacctgctccagaacagtgtggacgacagctggacagacagcaac
ctgaaccgcgtgtctgtcatccagttccaggaggagaccaccaagcaggaggcggaggat
gacgaggcggccgcggagcgcaggggtctccagcggcgggcgacaccacaccacagtgag
ctgaaggtgatgaagaaagggattgaggagaggaggaacgaggcctacacttccagagcg
gatggagagacggagtcccctggtgctgaggagaagcggctgagcgatctgtccaatcag
agccacgactctgcggcgtccaacagcacggcctcggctaactcccacgaagagaggcgg
ggcctgatgaccacagacctggtgggtgggcgtggcccccaggaggtggaggtgctagat
gagatggaggtggagtacgtagagcccacggtgcactttgcagaggagcccatgtaccgg
ggtggggacgagaatggtgacgacgatgaggagggcgaggatggggtcccacacagctac
gaagaggaacaacagaggccccagttccctacggagaagcagcgtctgatcaggaaagac
acgccgcactacaagaagcacttcaagatcaccaagctgccaaaaccggaggcggtggcc
gcgttactgcagggcttcagccccgacgctcacctggctcaacacccagcctcgcaccac
actgcccccgaggaggaggaggaggaggaggaggatgaggaggaggaaggggaggagtgt
atggtaactccacagcgccacaacaggatagaagagtcagagctggaggataggagtctg
cttcatgccaactcctccctgcagccggtcaagggggtgtcatttgatcaagtcaataat
ctgctgattgagcctgctcgaattgaggaggaagagcacaacctgaccattctacggcaa
actgggggtctgggcatcagcatagccggaggaaagggatccacaccctacaagggggat
gatgagggcatcttcatctccagggtgtctgaggatggacctgcagcccgggctggggtc
aaagtgggagacaaacttctcgaggtgaacggcgtggccctccagggtgccgagcaccac
acggcggtggaagccctgcgcagctcgggcaccgccgtctccatgagcgtcatccgggag
cacatggtggagccggagaacgccatcaccaccacgccgctgaggcccgaggacgactac
ttcccccgggagagacgggccagcgggctgcccttctgcatggaggccagctcccccgca
ggcccccgacacaggcggtctacctgcctggtccgcaacgacaagggcctgggcttcagc
atcgccgggggcaagggttccacagcctaccgcacgggggacttggggatctacatctcc
cgaatcgcagagggaggggcggcccaccgagacagcacgctccgcgtcggggacagggtc
atcacgatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcgctgctt
accggcacctcccccaccatcgccctcctggtggagcgcgaccaggccgagccgggcacc
gcagggggctccccgggcctgtcccgcgcccgtgcccactcccccccgcccccagagccc
tccgactcgcccgatcaggaggagggcaacgacgactcgccccacgggacccacctgagc
cggccgctgcaggacgagtaccccatcgaggaagtgatgttggtgaaggcgggcggccct
ctaggactgagcatcgtgggaggcagcgaccatgccagtcatccgttcggcgtcagcgag
cctggtgtcttcatctcaaaggtgatcccacatggcttggcgtgtcagagtgggctgcgg
gtcggggacaggatactggaggtgaacaccatcgacctgcgccacgccacccaccaggag
gctgttaaagccctgctctccaacaaacaggagatccgcatgctagtgcgcagggacccc
tcaccgccggggatgcaggagatagtgatccagaagcagactggagagaagctgggcatc
agcatacgtggcggtgccaaaggccacgctggcaaccctttcgacgccaccgatgagggc
atcttcatatccaaggtgagctccagtggtgcagcggccagagacggccgtctgctggtg
ggcatgcggatcctggaggtgagcaaccacagcctgctgggcatgacccacacggaggcc
gtgcgcgtgctccgcgccgtgggagacaccctgttcatgctggtgtgtgacggcttcgac
ccaggcaacgctgccgccatagaggcgtcgccgggcatcattgccaacccgtttgcggcg
ggcatcgtgcgtaagaacagcatggagagcatctcctctatagaccgagacctgagtccc
gaggagatggacatcctacagaaggaggtggagatggcgcgagagacgtcccagtgggag
agagaagaggtggagcgcatgcgcttggagcgtgaggaggctactcgcctgctagaagag
gagaccgagaacctgggcactggacctctgaatctggactaccggacgctggctgcactg
cccaccaccgctctgcagaaggtcaacaggttcgctccctctgtctgtgtgactgccttc
atggaggcccccctgcagacccaatgttctgcccccttagagcccctgggctttggcctg
gggcagccctccacctccctctaccacgtggacccccatgctctgcctcagtcctgcccc
actatgatcacagaggccgagcacctctacatgtcccagcactctcccagtcccgccatc
acctccttcaatcaagaagcagctagacaggaagccccgcctaccggtgaagatgaagag
gaggagattctggtggactcccagccaattaacttcagtgagaaccccttcctggtggcc
aatcgcaagggaaagggccgccccccctcggagtgtatcctatcagggcctcccatgggc
tacgggagcggcggcaagttgcagccctggttgttcagcaaggcaccctccactgagccc
cccaggacagacagtcccattagagatgccccctactcacctagcacacaaccgcccagt
gctcattcctccaccagttccctgtgtgcaggcagggagacccgcttcgcaagcattcat
ttcccccaaagtgcactgcctgccaagaataactcgccattgagtccctatgagacgagg
ccgggttccatccagccactctcccgtggtggcgggcggccaagcacctcgccaggcact
ccggacgggcacagcagagacgggcacagcagtcccaaccccttccagcatggcccctcc
cccatcaactcccagacctctctgcagcctcgtgccccctcccctgacacaatcgatgag
ttctccctgaaccccaagcaggcatacaaggcgtttgccgccgtgcctcactcgctggcc
atgttggagccaccgctgcaggacctgtatggccagaggaacaacatccagtccaacctg
ccttctccttctctagagcctgagctgaacaacgaggtgtttgaggatgaggtagagggg
gacggaggtctggcagcccacgtctctccccgaccctccctctcctctgaccgtcgggac
tatatgagtctggcagcagtgccacgcctctccagagcctcaatggacatggtcgtaaag
actccatctcctgggggcagagacagcccagagcagcgctccttcagggacagacagaag
tacttcgagattgacatgaagcagcagacgcccgacagcaagcccaaaggccgcgtgtcc
ctggtgggagcagatgacctgaagaagatgagggaagaggaagagaggagatttgagcag
cgggcgcgggagtacctgatggatgacgatgatgaggaggacgacgacctggtgacgcag
atgggagtgttgaaggccacgggcaaggtgttgctggacggggtggagtacaaggtggag
cctgtggccacgccccccaggcactataacacgccccccagctacagcgccacgccccct
agctactgtggcagctcagggccctcgtcagtggatggtaaaggagactcccagaggaat
tccttagaggagagcttcaggttggatcagcagcggcccaactccatgactggtctgatc
ccagtgtaccctggagagtcgggggctcccatccggacggccaaggcagagcggaggcaa
caggagcggctgaggatgcagagtccagagctggccccggccggagacaaggacctgtcc
cccgccgagaaacgggctctggaggccgagaagagagccatgtggagggcagcaaggccc
tatggcctagaggaggatgttaggcagtatgagcaggacctggctaagaggctctaccag
tcgcgagtgagggcgtctcagggcaccgtgccgccccctcagccccaaaacgctgccgct
tcctccgctgcctcccagctcaggatgaagtctctggagcaggatgctctgaaggctcag
atggtcatcgctaagtctcgggagggaaagaagcgtggcacactagaccagctggccgag
tcaccctcgcccgcccccacgccatcccccacccctctggaagatttcagtcccagagga
gtgacgtcaccaggcagactgtccctgtcggaaaagaagtttgactaccgacagtttgct
gccattccttcttccaaacccgtatacgacatccagtcccctgacacggtcgacgacttt
cagttcattgacgacggctccagtaaccctgtgcccgctgaggtccccactgccacctca
acgctggaggagatggccctctacagaaacaaacgcaagctgaggcagggccgccgcagc
ctggagaccgccgtgcccacataa
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