Oncorhynchus mykiss (rainbow trout): 110489911
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Entry
110489911 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110489911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110489911
03036 Chromosome and associated proteins [BR:
omy03036
]
110489911
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110489911
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110489911
PBAF complex
110489911
GBAF(ncBAF) complex
110489911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
110489911
NCBI-ProteinID:
XP_021418574
Ensembl:
ENSOMYG00000018283
LinkDB
All DBs
Position
15:complement(27370471..27421433)
Genome browser
AA seq
506 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPAVRPGL
PAPVMEPSRKRPAPSQQVQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPD
PIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIE
SINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQE
AVSRYFYSKIQQRRQELEQALAVRNT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcagggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagcgaggatgccccaccagggt
gctccaatgggcccccccggacccccgttcggtgggagccccgcggtgcggcccggccta
cccgccccggtcatggagcccagccgcaaaagacctgccccctcccagcaggttcagcaa
cagcagaacgtccagaaccgggccagaaagaagccagtgggattccccggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgagctggtcccg
gagtcccaggcttacatggacctgttggcctttgaacgtaaactggaccagaccattatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcctgacgctgacgactcggacggc
agtattgcatcatgggagctgcgggtggaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctcattcttcaagagcctggtgatcgagctagacaaagacctgtat
ggtcctgacaaccacctggtagagtggcaccgcactcccaccacccaggagacggacggc
ttccaggtgaagaggccaggggacgtgagcgtgcgttgcacactgctgctaatgctagac
taccagcccccccagttcaagctggaccctcgtcttgctcgcctgctgggtatccacacc
cagacccgctcctgtatcatccaggccctgtggcagtacgtcaagaccaacaagctgcag
gactcccacgacaaggagtacatcaactgtgacaagtactttcagcagatctttgactgc
ccgcggctcaagttctcggagatcccccagcgtctcaccaacctcctcctgccccctgac
cccatcgtcatcaaccacgtcatcagcgtggaccctaatgaccagaagaagacagcgtgc
tatgacatcgacgtggaggtggaggaccccctgaagagccagatgagcagcttcctgctc
tccacagccaaccagcaggagatcgcctcactggacaacaagatccacgaaaccattgag
tccatcaaccagttaaagatccagagggactttatgctcagcttctccagagaccctaag
ggctacatccaggactggctcaagtcccagagcagagacctgaagctgatgacggacgtg
gtggggaacccggaggaggagaggagggcggagttttaccacgagccctggtcccaggag
gccgtcagtcgttacttctacagtaagatccagcagaggagacaggagttggagcaggcc
ttggctgtgaggaacacctaa
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