KEGG   Oncorhynchus mykiss (rainbow trout): 110489936
Entry
110489936         CDS       T07259                                 
Symbol
myom1b
Name
(RefSeq) myomesin-1 isoform X1
  KO
K24495  myomesin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110489936 (myom1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:omy04990]
    110489936 (myom1b)
Domain-containing proteins not elsewhere classified [BR:omy04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   110489936 (myom1b)
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_DSCAM-DSCAML_C Ig_2 Pur_ac_phosph_N ig V-set Ig_CD22 C2-set_3 Adeno_E3_CR1
Other DBs
NCBI-GeneID: 110489936
NCBI-ProteinID: XP_021418625
Ensembl: ENSOMYG00000021528
LinkDB
Position
15:28246518..28281728
AA seq 1623 aa
MSGSTPFYQKHHRHYDRGYRSKELESAVSQYQSSSSSSYAARRSSSRASASASAALSASS
GHVVALHERTTPIPCSYTRLSSSYSGLEESRLSPMPKRAKPTYLAMDKENQIIGYVVPIF
RGSQEYASGFSDTEEARVKESAGYMARRNLFTSGLEMERTEQTSRKVSMRESAERISLSK
RIYENEEHHKRMNKDSLMHAPEFVIKPRSHTVWEKQCVRLHCTVSGWPDPRVVWYKNNVT
IDPMAHPGKYKLESSYNVHSLEINRCDFDDTAQYRVSAMNSKGELSSFASIVVKRFKGEV
EEALPMPRHGLISEYGITFDTHIVDGFGVSFGREGETMSLGATVIISPNLARYQPEVQWY
RDDVLLQPSKWCHMHWSGDKATLTLTHLNKEDEGLYTLRITTKSKYETYSAYVFVRDADA
EVEGAPGAPLDVKCQDANKDYVIVTWKQPAVDGGSSILGYFVDRCEVGTTHWSQCNDTPI
KFARFPVTGLVEGRSYTFRVRAVNKSGMSRPSRVSEVVAAMDPADRARMRGTSAPWTGQI
IVTEEEPAEGVVPGKPKELEVTEATKNYVVLSWKPPGERGHEGIMYYVEKCVSGTDSWQR
VNTEIPVKSPRFALFDLAEGKAYSFRVRCCNSAGVGEPSEATEATTVGDKLDIPSAPGRV
VPTRNTDTSVVVSWEASRDAKELVGYYIEASIVGSNKFEPCNNKPVKGTRFICHGLVTGE
SYVFRVKALNAAGLSECSQESEAIEVKAAIGGGIPHASPTPPYGISVLECVRDSMVLAWK
QPTFIGGADITGYFVDYREVINGVPGTWHEANVKAVSDRAYRVSDLKENRKYQFQVRAAN
MAGVGIPSLPSGTFVCEEWTIAVPGPPHDLQVTEVRANTLVLLYKPPVYQGRDPVNGFYI
DIKEADAEEEAWRGVNEKAVLTNYMKIKTLKEGETYVFRVRAQNKAGVGKASEPTEPVLA
ETKPGTTEIVVDVDDDGVISMNFACSNLTPDSKFVWSKNYEEITDDTRITVATSGGKSKA
TFNMLAEDDIGIYSCAVTHTDGACSSYTLSAEELKKLLELSHDHKFPIIPLKTELAVELQ
EKGRIRFWLQAEKISANGKIEYVFNDNSLSQGEKYKMNFNKDTGVIEMIMESLLPEDEGT
FTFQLQDGKATNQSSLVLIGDVFKGLQKESAFMRKEWHRKQGPHFVEYLSYEVTPECCVI
LKCKVGNIKKETVALWYKDGREVKGDEKLTFTEGVLNLEIAQISKKDAGVYEIVLKDDRG
QDTSTLNLTEQGFRDLMNEVFSNIANSSTALKIQSTDEGIRLYSFVSYYNEALQVTWHHK
DSAIAFTDRIKSGVVGEQLWLQITEPTEKDKGKYAIEFHDGKGGLKRTVELSGQAFDDAY
AEFQRLKAAAIAERNRARVAGGLPDVVTIQELKALNLTCNISGEPLPEVVWLKNEREIVS
DGHYVMKLEAGKYASFTITTVNTTDSGKYSILVKNKYGTESADFTLVVTEGKGDLGVTSY
LTDADGNVIIGCKSRPTTPTERRKSVTGKKMQKRKDSVILQKPPEEKEGKKKEEKKMEDK
TDALSKTTDKKKAAPAVASRVGKQETLQQPTTTADEAKPDDVPTSEKPTEKPQINKGKND
QDE
NT seq 4872 nt   +upstreamnt  +downstreamnt
atgtcgggatccacacctttctaccagaaacatcaccgccactatgaccgtggttaccgc
agcaaggagttggaatcggctgttagccagtaccagtcaagcagcagcagcagctatgcc
gcccgtcgcagcagcagcagagccagtgccagtgccagtgccgctctcagtgccagcagt
ggacatgtcgttgcactgcatgaacgaacaacgcctatcccttgtagctacaccagactt
agttcctcatactcgggcctggaggagagcagactgagcccaatgcccaagagagccaag
cccacctacctggctatggacaaagagaaccagattatcggctatgtagtgcccatcttc
aggggcagtcaggaatatgccagtgggttttcggatactgaggaggcccgggtgaaggag
agtgctggatacatggcccggaggaatctgttcaccagtgggttggagatggagcggacg
gagcagacgtctaggaaggtgtccatgcgcgaatcagccgagcgcatctccctgagcaag
aggatctatgagaacgaggagcaccacaagcgtatgaacaaggatagcctgatgcacgcc
ccagagtttgtgattaagcctcgctcccacacggtgtgggagaagcagtgtgtcaggctg
cactgtactgtctctgggtggcctgacccacgggttgtctggtacaaaaacaatgtgaca
atcgacccaatggcccacccaggcaagtataagctagagagcagctacaacgtgcactca
ttggagatcaacagatgtgatttcgatgatactgcacagtatcgtgtttctgccatgaac
agcaagggagagctctcctcctttgcctccatcgttgttaagagattcaaaggagaggta
gaggaggctctccccatgcccagacatggcctgatctctgagtatggcatcacctttgat
acccacatcgtggacgggtttggcgtgtcgttcggacgggagggcgaaaccatgagcctg
ggcgccacagtcatcatctcccccaacctggcacgctaccagcctgaagttcagtggtac
agagatgatgttcttctgcagccctccaagtggtgtcacatgcactggagtggagacaag
gccacgctgaccctgacacacctgaacaaggaggacgagggtctctacaccctgcgcatc
accaccaagtctaaatacgagacctactctgcttacgtctttgtcagagatgccgatgcg
gaggtggagggagcccctggcgcccctctggatgtgaagtgtcaggacgccaataaggat
tacgtcatcgtgacctggaagcagccggctgtggacggtggcagctccatcctgggctac
tttgtggacaggtgtgaggttggcaccacccattggagccagtgcaacgacacgcccatc
aagtttgcccgtttccccgtgacggggttggtggaggggcgctcctacacattccgtgtg
cgtgccgtcaacaagtctggcatgagccggccctcccgtgtctctgaggtggtggcagcc
atggatcctgccgaccgcgcgcgaatgagaggtacctctgcaccctggaccggccagatc
attgtcactgaggaggagcctgcagagggcgtggtccccggcaaacccaaagaactggag
gtcaccgaggccaccaagaactatgtggttctgagctggaaaccccctggggagagaggc
cacgagggcatcatgtactatgtggagaagtgtgtgtctggcacagacagctggcagagg
gtgaacactgagatcccagtgaagtctcctcgcttcgccctgtttgatctggcggaggga
aaggcctacagcttccgtgtgcgctgctgcaactccgccggcgttggcgagccatcagaa
gccaccgaggccaccactgtcggggacaagctggatatcccatctgccccaggccgtgtg
gttcccaccaggaacacagacacgtccgtggttgtgtcctgggaggcttccagggacgct
aaggagctggtgggatactacatcgaggccagcatcgtgggtagcaacaagtttgagcca
tgtaacaacaagcctgtcaaaggcaccaggtttatctgtcacggtctggtgacaggagag
agctacgtgttcagagtgaaggcactgaatgccgctgggctcagcgagtgttctcaggag
tctgaggctattgaggtgaaggctgctattgggggcggtattcctcatgcgtcccctact
ccaccctatggcattagcgttctggagtgcgtgcgggactctatggtgctggcctggaag
cagcccaccttcatcggaggcgctgacatcaccggctacttcgtggactaccgtgaggtc
atcaatggggtgccagggacatggcacgaggccaacgtcaaggctgtcagcgacagagcc
tacagagtgtctgacttgaaggagaacaggaagtaccagttccaggtgcgtgctgccaac
atggcaggagtgggcatcccttctctgcccagtggaacatttgtctgtgaggagtggacc
attgctgtgccaggacctccccatgatctgcaggtgacagaggtgcgcgccaacactctg
gtgttgctttataagccaccagtgtaccagggccgtgacccagtcaacgggttctacatt
gacatcaaagaggctgatgctgaggaggaggcttggagaggagtcaacgagaaggctgtc
ctcactaactacatgaagattaagactctaaaggagggggagacctatgtgttccgtgtg
cgtgctcagaataaggcaggtgtgggaaaggcctctgagcccacagaaccagtcctggcc
gaaaccaaaccaggcactacggagattgttgtggacgttgatgatgatggagtgatctcc
atgaactttgcctgctccaacctgactccagactccaaatttgtgtggtcaaagaactac
gaagagatcacagacgatactcgtattactgtggcgaccagtggggggaagtccaaagcc
accttcaatatgcttgcggaggatgacatcggcatttactcttgtgctgtcacccacacc
gatggtgcttgctccagctacactctctcagcggaggagttgaagaaactgctggagctc
agccacgaccacaaattccccattattccattaaagacagagctggctgtggagctgcag
gagaagggccgaattcgcttctggctgcaggctgagaagatctctgctaatggcaaaata
gaatatgtgtttaacgacaacagtctctcccagggagagaaatacaagatgaactttaac
aaggacacaggtgtgattgagatgatcatggagtctctgctcccagaggacgagggaacc
ttcaccttccagctgcaggacggaaaagcaaccaaccagtccagcctggtgctgattgga
gatgtgttcaaggggctgcagaaggagtctgcgttcatgcgcaaagaatggcacagaaag
caaggtcctcactttgtggagtatctgagttatgaagtgaccccagaatgttgtgttatc
ctgaaatgcaaggttgggaacataaagaaagagactgttgcattgtggtacaaggatggg
cgcgaggtcaagggagatgagaaactcaccttcaccgagggagtgctcaatctggagatt
gctcagatctcaaagaaggatgccggtgtctatgagattgttctgaaggatgacagaggg
caggacacatccacgttgaatctgacagaacaaggtttcagggacttgatgaatgaagtg
ttcagtaatattgccaactcctccactgcactgaagatccagagcacagacgagggcatc
agactctactcctttgtcagttactacaacgaggcgctccaggtcacctggcaccacaag
gattcagcgatagccttcacagaccgcattaagagtggtgtggtgggagagcagctgtgg
ctacagatcacagagcccacagagaaagacaagggcaaatacgccatcgagttccatgat
ggaaagggcggtctgaagaggactgtagagctgtctggccaggcatttgatgacgcatat
gcagaattccagaggctcaaagcggccgctattgcagagagaaatcgtgctcgcgtggca
ggaggcctgcctgatgtcgtcaccatacaggagttaaaggccctgaacctgacctgtaac
atttcgggcgaacccctgcctgaggtcgtctggttgaagaacgagagggagattgtgtct
gatggccactacgttatgaagctcgaggcgggcaagtacgccagcttcaccatcaccacg
gtgaacacgacagactcgggcaaatacagcatcctggtgaagaacaagtacggcacagag
agcgctgacttcaccttggttgtaacagaaggcaaaggggacttgggagtgacctcctat
ttgactgatgctgacgggaacgtgatcattgggtgtaaaagcagacctaccaccccaaca
gagaggaggaagtcagtcactgggaagaaaatgcagaagagaaaggattccgtaatcctc
cagaagccaccagaggaaaaggaggggaaaaagaaagaagaaaagaagatggaggacaaa
actgatgctttgtcaaaaaccacagacaagaaaaaggctgcccctgctgttgcaagcagg
gtcggcaagcaggagaccctgcagcagcccacaactacagcagatgaggcgaagccagat
gatgtccccacatctgagaaaccgacagagaaaccacagattaacaagggcaaaaatgat
caagatgagtga

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