Oncorhynchus mykiss (rainbow trout): 110490012
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Entry
110490012 CDS
T07259
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110490012
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110490012
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110490012
NCBI-ProteinID:
XP_036800196
Ensembl:
ENSOMYG00000029826
UniProt:
A0A8C7SG23
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Position
15:complement(32557738..32679847)
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AA seq
806 aa
AA seq
DB search
MGERLHHYLGGGRPVYTLLLPLALALLTLLCEAQGRMDRARSQEESRAGLLRRVKRGWVW
NQFFVLEEYTGLEPLYIGKLHSDMDLGDGSIKYILSGDGAGTTFTIDDSTGDIHAIKRLD
REVKAQYLLKAQAWNRQTDRPLEPESEFIVKIQDINDNEPRFQDGPYQATIPEMSTIGTE
VIRLTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGEVRVSLAGMDREVREIYSIIIQ
AKDMGGQLGGLAGTTVVNITLSDVNDNPPMFDQKLYQMSVLESAPVGSVVGRIRAKDRDI
GINAEMRYSIIDGDGRDTFDISTDPTNLFGIITIKKPLNFESKASYTLKIEGANTHLDHR
FLDKGPFSHVTIVHVSVEDIDEPPEFSSAAYYIEVSEEAEIGTVFKTVSARDPDASNNSI
RYSIEMTTDLGKYFYIDITSGALMTVLALDREELSWHNITVLAMEMNNPSMIGSVSVAVK
ILDVNDNPPSLTHYFEAFVCESAKAGQLIQTVTAIDPDDPLGGQHFYYSLAPEAANNPNF
TLRDNQDNTAWILTRRGGWSQQDQSVYYLPIFISDGELPVQTSTSTLTIRVCSCDVEGNV
MSCNAEAYHLPASLSRGALIAILACIFVMLVMILLMLSLRSHRKKPYLHDEEDNVHENIV
RYDDEGGGEEDTEAFDIAAMWNPHEAHLVGKQRQDMLPEIESLSRYVPLACVGWPGSVCV
GGDSNVQGYVLSKLLEADLDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGCSNTDHEYDY
LNDWGPRFKKLAEMYGVLETNNPPMW
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagacttcaccactatcttgggggtggtaggcctgtctacaccctactactc
ccactagctctagccctgctgaccctgttgtgtgaggcccagggccgtatggatagagcc
aggtcacaggaggaaagtagagcagggctgttgaggagggtgaaaagaggctgggtatgg
aaccagttctttgtgctggaggagtacactggactggagccgctatacattggaaagctc
cactcagacatggacctaggggatggctcaatcaagtacatactatcaggagacggtgcc
ggcaccaccttcaccattgatgacagtacaggagacatccatgccatcaagaggctggac
cgcgaggtcaaggcccagtacctgctgaaagcccaggcctggaacagacagacagaccga
cccctagagcctgaatctgagtttatcgttaagatccaggacatcaatgacaatgaacct
aggttccaggatgggccctaccaagccaccatacctgagatgtcaaccatcggcactgag
gtgattcggctgaccgctacagatgctgatgaccctacatatggtaacagtgccagagtg
gtctacagcatcctgcaaggacagccatacttctctgtagagcccaagactggcgaggtg
cgtgtgtctctggcgggcatggaccgagaggtcagagagatctactccatcatcatccag
gccaaggacatgggaggccagctagggggtctggctggaaccactgtcgtcaacatcacc
ctcagcgacgtcaacgataacccacccatgtttgatcagaagctgtatcagatgagcgtt
ctggagtcggctcccgtggggtctgttgtgggtcgtatccgggcgaaggatcgtgacatt
ggcatcaacgcagagatgaggtacagcatcattgacggagacgggagggacaccttcgac
atcagcacagaccccaccaacctgtttggcatcatcaccatcaaaaagcctctgaacttt
gagagcaaagcaagctacactctgaagatagaaggagccaacacacacctggaccaccgt
tttctggacaagggcccgttcagccatgttaccattgttcacgtcagcgtagaggatata
gacgagcccccagagtttagctctgctgcatactacatagaggtctctgaagaagcagag
attggcacagtgttcaagacggtctctgccagagaccctgatgcttccaataactccatc
aggtattccatagagatgaccactgacctggggaaatatttctacattgacatcacttcc
ggggcgttgatgacggtgctggcgctggacagagaagagttatcctggcataacatcacc
gtcctggcaatggagatgaataatcccagtatgatcgggagtgtgtctgtagctgtgaag
attctggacgtgaatgataaccctccatcgctgacacactattttgaagcatttgtctgt
gagagcgccaaggctggacagctgattcagacagtgacagcaatagacccagatgatcct
ctgggaggtcagcatttctactacagcctggcaccagaggctgctaacaaccccaacttc
accctcagagacaaccaagataacacagcatggatcctgacgcggcgtgggggttggtct
cagcaggaccagtcagtctactaccttccaatctttatctcagatggagagctgccggtc
cagaccagcaccagcaccctgactatccgtgtgtgtagctgcgatgtggagggcaacgtt
atgtcctgtaatgctgaggcctaccacctaccggctagtctgagcagaggggcactcatc
gccatactggcatgtatcttcgtgatgcttgtgatgatcttgctcatgttgtccctccgg
agccaccgtaagaagccctacctgcacgatgaggaagacaacgtccacgagaacatcgtc
cgctacgatgacgaggggggtggagaggaggacactgaggccttcgacatcgctgccatg
tggaacccccacgaggcccacctagtggggaagcaacgtcaggacatgctgcccgaaatc
gagagcctttcacgctacgttccccttgcatgtgtgggctggccagggagcgtttgtgtt
ggtggagacagcaacgtgcaggggtatgtgctatccaagcttctggaggcggatttggac
ccctgcgccccaccttacgactccctacagacctacgcctatgagggggagggatcggtg
gctgagtccctgagctcgctgcagtctggctgctccaatactgatcacgagtatgattat
ctcaatgactgggggcccaggtttaagaaactggcagagatgtacggggttctggagaca
aacaaccctcccatgtggtag
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