Oncorhynchus mykiss (rainbow trout): 110490024
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Entry
110490024 CDS
T07259
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110490024
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
110490024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
110490024
NCBI-ProteinID:
XP_021418785
Ensembl:
ENSOMYG00000032395
UniProt:
A0A8C7SQA9
LinkDB
All DBs
Position
15:36166507..36264082
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AA seq
1184 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRWDEVREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPASPSSTTRTQTRDKPLQEQ
LPLNQIKSEPMDYEYKPMVVSPAAGATGVNGHGGGVFNGGAAAPLQSAVQAMMLPTMGLV
SPISINLADLQNVLKVAVDSNMIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQD
GNATKIIINYSLDPSQTQTQLTAQNLKKEPPTLATTPGQAATEPSSKTQQKLPEDLTVSR
PPRSKEEKMEEETTKTCLLCNECPNGLDALHTLKHCKKASGLRINGDKSKSAIDSLLSEG
FGDQPKNLLSLLKAYFSLNVEPTKEELSKISDSVSLPADVVKKWFDKMQSGQVSLGAPTP
PSEEEGPLSECHGAIVVSPKVRSEQNTESPTLMQSSPAEATPAEVNGSGPCPASPTPLNL
TTGGAVPAKPSSSDSTEVPLDLSLPKPLREETAATAASYQATVYSHQDEPLNLTKTCTTK
KELPLSAGAAGHHMTSQTLSFYTAGPQSANPISIMTTQLPSGTIYAITDQGSTGVPCLRA
LTTNNNQTILIPQLAYTYTTTATASSPAGTETQEKTTLQINGIKEERQDTSSEGVYTMEE
QNDSDTTPSRNKMRKTESGLYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICRKAFKH
KHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAQGGQGGVGEEVLE
IQSPVGLGLGGEQPEQSDSRPTSSPPSHLDSDERGSSTREEEEESDEEDMETVAGEAVEG
DPDSVLDMDDIQVVRIGDEGGEEEEEEEEREEEGEDTGHEGGENAEEEEQGVKRIVVGGE
EEEGEEEEEEGLVGVEVKEEQEEKEVTGEKAHTRQEEVKENREKEEEHGGEKEVEEEQSE
QAQEEVKEETMDTEEAVTSEEKEESGEVMKENEGETNGNTVSED
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaatgtagtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcgtggaggaggacgggagtctggcagacggggctgactgtgacagcaacgtaccc
agtgaagatcacaacggagaccgctgggatgaagtgagggaggagtgtggttctgatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatctacccagaagcccctgaggacgagccccgccaggggacgcccgaggccagcgga
catgacgagaatggcactccagatgcgttctcacagctcctcacctgtccctactgctcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccgaaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcatcacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgtaagaagcgt
ttctcccactccggttcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgacccctgcccgccaaggcctcccaatgcccatccccagccatg
cccgcctcgccctcctccaccacacgcacccagacccgagacaaacccttgcaggaacag
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatggtagtg
tctccagcagcgggggcaacaggagtgaacggtcacggaggaggggtgttcaacgggggt
gcggctgccccactgcagagcgcggtgcaggcgatgatgctccccaccatgggcctggtc
tctccgatcagcatcaacctggcagacctacagaacgtcttgaaggtggcggtggacagt
aacatgatcagacagatgttggagaacaatgctaagtcggcggggactggcatgggggcg
acaggtgttcctcaccagcagctcatctcagccatcagtctgcccattatgggtcaggac
ggcaacgccaccaagatcatcatcaactacagcctggaccccagccagacacagacccag
ctcactgcccagaacctgaaaaaggagcccccgaccctggctacaacaccaggccaggct
gccacagagccctccagcaagacccagcagaaactcccagaggacctgacagttagcagg
ccccccaggagcaaagaggagaagatggaagaggagactactaagacctgcctgctttgt
aatgagtgccccaatggtctggacgctctccacacactcaagcactgtaagaaagcctcg
ggcctcaggatcaatggggacaaatcaaagtctgccatcgattcattattgtctgagggg
ttcggggatcagcccaagaaccttctgtccctcctcaaggcctacttctccttaaatgtt
gagcccaccaaggaggagctcagcaagatctccgactcggtcagcctgcctgccgacgta
gtcaagaagtggtttgataagatgcagagtggtcaggtctcactaggggccccgacccct
ccgtctgaggaagaagggcccttgtctgagtgtcatggggccattgttgtgtcccctaaa
gtaagatcagagcagaacacagagagccccaccctgatgcagtccagcccagctgaggcc
actccggctgaggttaacggctctgggccctgcccggcctcccctacaccactaaacctg
accaccgggggggccgtcccagccaaaccctcctcctcagacagcacggaggtccccctg
gacctgtcgctaccaaagcccctccgagaggagaccgctgccaccgcggcctcttaccaa
gccactgtttactcccatcaggacgaacccctgaacttgacgaagacttgcacaaccaag
aaagaacttccgctctctgccggcgccgcaggccaccacatgactagccaaaccttgtcc
ttttacaccgccggcccacaaagtgccaaccccatcagcatcatgaccactcagctgccc
agcgggaccatctatgccatcactgatcagggcagcacgggtgtgccctgcctccgggcg
ctcaccaccaataacaaccagactatcctcatcccacagttggcctacacctataccact
acagctacagccagcagccctgcagggacagagacacaggagaagaccacactgcagatc
aacggcatcaaggaggagcgtcaggacacaagctcagagggcgtgtataccatggaggag
cagaatgactcagacaccaccccttccaggaataagatgaggaagacggagagtgggttg
tacgcctgcgacctgtgtgacaagatcttccagaagagcagctctctgctccgacataaa
tacgaacacacaggcaagagaccccacgagtgtggcatctgcaggaaggccttcaaacac
aagcaccacttgatagaacacatgcgtctccactccggagagaaaccctaccagtgcgac
aagtgtggcaagcgcttctctcactcaggctcttactcccagcacatgaaccaccgctac
tcctattgcaagaaggaggcgcagggaggtcagggaggtgtaggggaggaagtgctggag
attcagagccccgtggggttgggcctgggaggggagcagccggagcagtcagacagcagg
cccacctcctcccctccctcccacctggactcggacgagcgagggagcagcaccagagag
gaggaggaggagagtgatgaggaggacatggagacagtggcaggggaggcggtggaggga
gatccggacagcgttctggatatggatgatatacaagtggtacggataggagatgaggga
ggggaagaggaggaggaggaggaggagagagaggaggagggggaagacactggtcatgag
gggggagagaatgcagaagaggaagagcaaggagtgaagagaatagtggtagggggtgaa
gaggaggaaggagaagaagaagaagaggaggggttagtgggggttgaagtaaaggaagag
caggaagaaaaggaggttacaggggaaaaggcacatacaaggcaagaggaggtgaaggag
aaccgtgagaaagaggaggaacatggaggagagaaggaagtggaggaggagcagtcagag
caggctcaggaggaggtgaaggaggagacaatggacacagaggaagcggtgacctcagag
gagaaggaagaatcaggggaggtcatgaaagagaatgaaggtgaaacaaacgggaacact
gtttcagaagactag
DBGET
integrated database retrieval system
