KEGG   Oncorhynchus mykiss (rainbow trout): 110490044
Entry
110490044         CDS       T07259                                 
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440  Homologous recombination
omy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110490044 (brca2)
   03460 Fanconi anemia pathway
    110490044 (brca2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110490044 (brca2)
   03036 Chromosome and associated proteins [BR:omy03036]
    110490044 (brca2)
   03400 DNA repair and recombination proteins [BR:omy03400]
    110490044 (brca2)
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    110490044 (brca2)
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     110490044 (brca2)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     110490044 (brca2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     110490044 (brca2)
SSDB
Motif
Pfam: BRCA-2_helical BRCA-2_OB3 BRCA2 BRCA-2_OB1 BRCA2DBD_OB2 Tower BRCA2_TR2
Other DBs
NCBI-GeneID: 110490044
NCBI-ProteinID: XP_021418819
Ensembl: ENSOMYG00000043819
LinkDB
Position
15:39547344..39589108
AA seq 2855 aa
MDIRRNMFDAFKDQIWEELGPLNPNWFEELTAKASSRDWGDTEKDNPSTAISCGQDGSFK
TPLGKCPLDGDMFSTPKIFRQRRPQSPETLIEDAVFFPDQGTSATEKMDTSPCLFGKSID
SRTPSKSYRTRLHGDSFGLLDTPKHSTIFLFQQAHSAKRTSESLGAQLDPDMSWTSSLNT
PVMSPTIILTKSEEHSPMCPVRIATDEQVMFVRKLFPSAKESRSTMLSPEQNDRPLCQHN
GLDSHLPGVIDISPGFQDTLPGDSGSHWKQTLPDAIEDGEICSTMTGVLDGAEDVLSIFF
SNKSLALQRVKTNERIKRKQSGATKKHVPTSTTEHDKVSSGRAGEYQHTRETSEPLESRT
DMKSGDLATSQWTPINVPNFLGYDMDSFHHEGSSSTKHIIPQGGKSETFRDFTGSQQPDR
GSSKHTVQVESALSRRRLPCTSQPEGSQLTGSVVESSLEHTFPRKTRTFVYCVQNPLLSV
QEKYVTQMLPASPGTAPRGENQNMKQSKTIPDEAEFNNLNKTALDGKKPLVQKSATEENI
VSQAPTKDPDLDMSQLCRVFAQDFSQVIDYSQPCSKRADAIKNGFSVSACLPAMRLRNRK
LLNRLEWGQKPEHLNSGISDEMHIPGSQFSNSANTSRMKSTVCDSGFPPSTLSDVTQTES
SIHPSSEKSYGNQSSRGFKTGNNWIISLPPEAIKKAKASLDDLIEENMTDVVTAASEVKP
VLSCVTGSRLSTEVKFISPLNIAKRSKQTSVKLNGQVHVPTHQSNVSVSSHPGSGFKMAS
NKKIRFFSANLEKDEDLFKEIEDEIPAVNIPEISLPEEGNMSCGLELVDGSHLPPLLYTH
QRSVNSQGPLTASQRADVSELCNLLEAADSQFEFTQFKPAKLNFYVPDGSPPHQSEKELD
PDFLTGIDFDDSFNSDVEKQSVKMVTPDKKTTISHCKEICQVTTTKIKSSGASSSNSTEK
SKEHVIHRRVLYIPSYSSENIAEHSFGLLTKSTNKNHLLDMDTNTSGMECERKKLDVGFK
TAGGNAMIVSEKCLSKARALFADFEEKNCAPKCAVKNTEQVEISPVQYRGEVDTHVDSNV
THFHGPENKVDLKEPHDEYIDKIKVDFTHSHTHGDGGFQTASGKGVTISAKALQNTNAVF
KDCDAMESSGCASEKLSKTSVVSETGSNNFERNNCGFSTARGKRLDVSAKSLLTLLNDCD
ELENSKPGKIPSLNAKIPSQNIQQKSDCDFKKPSIKAASISARIPFTAKTQFDSGMSHDV
LGAKSKMLEPENSQTHAKDPLKNGCGFSTASGKRVSVSEGALLKAQALLSECNVDGEELS
KSKKKIRVDLHNPTQKHSGCKTAGVKEVTVSPKAHKQAQALFNNCDFNMDSLISAEAKQG
NIDVKSADGLMNNPGKSYCAFMTAGGENVHVSEKGILKAKSILNENLDNCTDSNAIEEAW
FSDGRFLLLTEDGTGVKKGARNKSNDSDLNGDEKSCDFSTAGGKTVHMSDGALQKAKSIL
NECDVIENPQPENGHNVHLEKIPTKETHEISHGSAASGNGVFISEKALQHVKSVYVLGET
GNVKYSVGSNPVGSHFGFSTASGKGLSVSEKALQEACDDTLARDTDPHKRSEGNRPLKVP
SPHINVQRVPVKAVRLEDREVIQTIVGMEWKSSSVECQAEYSLLNFESLGFSGCSVTQRR
YFAQEAMDCTKALLEDEDLTDHCPGTPIQANPMSCKGGFEMRSGIGKRSAEDLGMTDQPP
LKRKLLTKFDRTVDCIRRSKLTPAKSSSDGIFKDRRVFKYNVALQPNVTRPYRAIQRCVD
TRLNKPEPQKTTSDPTAEDRKPVSSKTAVFVPPFRKNVKLEPQGSSGLQDKTRAPGVFVS
PFLKNNRLTREGSFKPSEDNHSPFISEMPTKTTSVPLPEYNPITDTGSDNAKESIKEQDP
QNIDKTDRGDDCGHCLPVTLGGEGATAEESIAGQLAPDATGTLLDVVYDAECLQLARDMQ
DMRIRKKKRQTIRPLPGSLYLAKTSGVSRLTLREAVGGWHPVQHTHKQLYGYGVHRHVWD
ISSESAEAFRFVCRHFFRREAFVEGCIQLADGGWLIPRNDGTAGKHEFHRALCDSPGVDP
KLISEDWVFNHYRWVVWKRACMERAFPEVMGSLCLTPEQVLLQLKYRYDLEVDNSKRSAL
RKIMERDDTAVKTLVLCVCGVVTKGHNPTRQSWSETKTKTPPGSAAGSKAKSSPVGLIWL
TDGWYAIKAQLDVPLTAMLHRGRLAIGGKVLVHGAELVGSQDACSPLEAPDSLMLKIGAN
GTRAARWYTRLGFYSNPSPFLLPLSSLYSNGGTVGCVDIVVLRSYPTQWMEKKSDGGFVF
RAGRAEEREARRHGNAKHRAMEILFAKIQAQFEKEEDVTKPFPPTEHHPTVCGKPRGRRR
TLRGRDIETLLDGEELYDAVENDPVYLEGRLSEEQREALNSYRRCVGERRQEALQERFRQ
ALESTQEGEGRSCHNRDVTPIWKLSIADSRAKPGSNAVYLLNIWRPSMDLQSLLKEGCRY
RAYQLSTSEGKKRAGNTSIQLTATKKTQFQNLQASAGWLSEIFQPREAVGFRVLLNLKPL
CGEVDLVGYVISITDRQGHSPVVYLVDGWLDFVEVRCCSSLVQQGLEEVVKPLALVALSN
LQLRAHPSSPTPIRSAIPGLYAGDLVSFSTNPKEPHLQEAAAQLRTLVQGQEHFFRTAEE
RLSNLIQVSVQCLPPLPWKADAKPDSRTTMKPQQSVRSVGPFTPLNSVVPPPPACFSGGD
NKDPKSLKRKRGLDYLCRIPSPPPLCPLGTMTLPSPCVNKTFNTPRRAETHRILKTPLAP
APQHVHLPLEDEWVEDEELFMIDTQALHDGIERDT
NT seq 8568 nt   +upstreamnt  +downstreamnt
atggacataaggagaaacatgtttgatgctttcaaggatcaaatatgggaagagttggga
cctctgaacccaaactggtttgaagagctcactgctaaagcttccagtcgggattggggt
gatacagagaaagataatcccagtactgcaatatcttgtggacaagatggtagtttcaaa
acaccattggggaaatgtccccttgatggtgatatgttctctaccccgaagattttcagg
caaagaagaccacagtctcctgagacattgatagaagatgcagtgttttttcctgatcaa
ggaacctctgcaactgaaaaaatggacacaagcccatgcttatttggaaaatcaatagac
agcaggacccccagtaaatcctatagaacaaggctgcatggagacagttttgggctgctt
gacacaccaaaacactctacgatctttttatttcagcaggcacactctgccaaacgtaca
tctgaaagtcttggtgcacagttagaccctgatatgtcctggaccagttctctcaataca
cctgtcatgtcgcccaccatcattttgactaaaagtgaggagcatagtcctatgtgccca
gtaagaattgctaccgatgagcaggttatgtttgtgcgaaagcttttcccttcggccaag
gagtctagaagcacaatgctgtcaccagaacagaatgatagacctctctgtcaacacaat
ggactagattcccacttgcctggtgtgattgacatctcccctggctttcaagacacgtta
cctggtgacagtggcagccattggaaacagactttaccagatgctattgaggacggagaa
atctgcagcacaatgaccggtgtcctagatggagccgaggatgtcctctccatattcttc
agcaacaaaagtttggctttacaacgggtgaagaccaacgagagaatcaaaaggaagcaa
agtggcgcaactaagaaacacgtacctacttctacaacggaacatgacaaagtatccagt
gggagagcaggagaataccaacacaccagggaaacatctgagcctcttgagtccaggact
gacatgaagtctggggatttggcgacttctcagtggactccaataaatgtacctaacttt
ttaggctatgatatggattcatttcaccatgaggggtcttcctctactaaacacataatt
ccacaaggtggcaaaagtgaaacattccgtgacttcactggaagccagcagccggatcgt
ggttcctctaagcacactgtccaggtggagtctgctctttccagaagaagattaccatgc
accagccagccagagggatctcaattgacagggtctgtagtcgaaagctctctagaacac
acatttcccaggaaaacaaggacatttgtttactgtgtccaaaatccacttctgtcagtg
caagagaaatatgttactcagatgttacctgcatcacctggaactgctcccagaggtgaa
aatcagaacatgaaacaaagtaaaaccataccagatgaagctgagtttaataatcttaac
aaaactgccttggatgggaaaaagccgctagttcagaaaagtgcaactgaagaaaatatt
gtttcacaagcaccaaccaaagaccctgatcttgatatgtcacagctttgcagggtattt
gcgcaagattttagccaagtaattgactacagtcaaccatgcagcaaaagagcagatgct
attaaaaatggcttctctgtatcagcttgtctcccagcaatgagactaaggaacagaaaa
ctgttgaatagactagaatggggtcagaaacctgaacatttgaactctggcatcagtgat
gaaatgcatattcctggttctcagtttagcaactctgcaaacacatctagaatgaagagt
acagtgtgtgatagcggcttccccccctccaccctttctgatgtcacacaaacagaatca
tccattcaccctagctctgaaaaaagttatggaaatcaatcatctagagggtttaaaacg
ggtaacaactggattatctctttgcctccagaagcaataaagaaagcaaaagcatcatta
gatgacttaattgaggaaaatatgactgatgttgttactgctgccagtgaagtgaaacct
gtgttgtcatgtgtgacaggaagccgactgtccacagaagtgaagttcattagtccactc
aacattgccaaaaggtcaaagcaaaccagcgtaaaattgaatggtcaagttcatgttccg
acccatcagagcaatgtttcggtttcctcacaccctgggtctggtttcaaaatggcctcc
aataagaagatacgttttttttcagcaaatctggagaaagacgaggatctgtttaaggag
attgaggatgaaatacctgcagtcaatattcccgagataagccttcctgaggaaggtaac
atgtcatgtggattggagcttgttgatggatctcatttaccacctctactctatacacac
cagaggtctgttaatagccaaggtccattgacagcctcacagagagctgatgtttcagaa
ttgtgcaatctcttagaagctgcagacagccaatttgagttcacacagtttaaaccagca
aagctgaacttctatgttccagatggtagcccccctcatcaatctgagaaagaattggat
cccgactttctcacaggcatagatttcgatgacagtttcaactctgatgttgagaagcaa
tctgtgaagatggtcacccctgacaaaaagacaactatttctcattgcaaggaaatttgt
caagtaacaaccaccaaaattaaatctagtggggcatcatccagcaattcaacagagaaa
tccaaagaacatgttatccacagaagagtactttacattcccagttatagctctgaaaac
atagctgagcattcctttggtttgttgacaaaatccacaaacaagaaccatctactcgat
atggatacgaacaccagtggaatggagtgtgaacgcaaaaagttggatgtgggttttaaa
actgctggcggaaatgctatgatagtttcagagaagtgtctgagcaaagcaagggccttg
tttgcagattttgaggaaaaaaactgtgcacccaagtgtgcagtaaaaaatacggaacaa
gttgaaatttcacctgttcaatatagaggtgaagttgacacacatgttgattcaaatgtg
acacattttcatggccctgaaaataaagtagatctgaaggaaccacatgatgaatacatt
gacaagattaaagtggactttacacattctcacacacatggggatggtggtttccagaca
gccagtggtaaaggagtgaccatctcggcaaaggcccttcaaaacaccaatgcagtcttc
aaagactgtgacgctatggaaagttcaggttgtgcatcagaaaagctgagcaaaacaagt
gttgtatcagagactggcagtaataattttgagagaaacaattgtggcttcagcactgct
cgagggaagagacttgatgtttctgcaaaatctctactgactctcctgaatgactgtgat
gaattggaaaattctaagccagggaaaatccccagcttgaatgcaaagataccaagtcag
aatattcagcagaaaagtgactgtgattttaagaaacccagtattaaagcagcctccata
tcagcaaggatcccttttacagcaaaaactcaatttgatagtggcatgtcacatgatgtt
ctaggggcaaagagcaaaatgcttgaaccagaaaattctcaaacccatgctaaagatcct
ttgaaaaatggatgtgggttcagcactgccagtggtaaaagagtgtctgtgtcagaaggg
gcgctattgaaagcacaggctcttttgagtgaatgtaatgtagatggagaggaactttct
aaatcaaagaaaaagatcagagtagatcttcataacccaacacagaagcacagtggatgt
aagactgctggtgtcaaagaagttaccgtatcacctaaggcccataagcaagcacaggct
cttttcaacaactgtgatttcaatatggacagcttaatcagtgctgaagcaaagcaaggg
aatatagacgtaaagtctgctgatggtctgatgaacaatccagggaaaagctattgtgcc
ttcatgacagctggtggagagaatgtgcatgtatctgaaaaaggtattttgaaggcgaag
agcattctgaatgaaaaccttgataactgcacagactcaaatgccattgaggaggcttgg
ttttcagatggtagatttttgttactcactgaagatggtacaggtgtcaaaaaaggagca
agaaacaaatcaaatgattctgacctcaacggggatgaaaagagctgtgatttcagcact
gccggtgggaagactgtgcatatgtccgatggagcactccagaaagcaaagtctattctg
aacgaatgtgatgtaattgaaaatccacaacctgagaatggccacaacgtgcatctggaa
aagattccaacaaaggaaacgcatgaaatctctcatggtagtgcagccagtgggaatggg
gtgtttatttcagaaaaggctcttcagcatgtgaagtctgtgtacgttctgggtgagact
ggtaatgtaaaatattcagttggcagtaatccagtcggaagccattttggttttagcaca
gccagtggtaaaggactgtctgtttcagagaaggcacttcaagaagcgtgtgatgatacc
cttgccagggatactgaccctcacaaaagatctgaaggaaataggccactgaaggtccct
tctccccatattaatgttcagcgtgtgccggtcaaagcagttcgactggaggaccgtgaa
gtgatccagaccattgttggaatggaatggaagtcttcatctgtagaatgtcaagcggag
tattccttgttaaattttgaatcccttggattcagtggctgctctgtgacccagaggagg
tactttgcccaggaggccatggattgtaccaaggctcttttagaggacgaagacttgacc
gatcattgtcctggaacaccaatccaagctaaccccatgtcctgcaaggggggttttgag
atgagaagtggaattgggaaaaggtcggcagaggatttagggatgacagaccagcctcct
ctgaaaagaaaactcttgaccaaattcgacagaactgtggattgtattcgacggtcaaaa
ctcactccagctaaaagcagttcagatggtatatttaaagacaggagagtcttcaaatat
aatgtggctcttcaacctaatgtcacgaggccatatcgcgctattcagagatgtgtagac
acaaggctgaataagcccgagccacagaagacaacgtcagatccaactgccgaagaccgt
aaaccagttagctccaagacagctgtatttgtccccccattccggaagaatgtcaagctt
gagccacaggggagcagtggtcttcaggacaagactagagcgcctggtgtgtttgtttcc
ccgtttctaaaaaacaaccgcttaaccagggagggttcctttaagccttcagaagataat
cattctcccttcatctctgaaatgcctaccaagaccacatctgttccacttcctgagtac
aaccccatcactgacactggtagtgataacgcaaaggagtccattaaggaacaggaccca
caaaatattgacaaaacggaccgaggtgatgattgtggccattgccttcctgtcacccta
ggaggagagggtgccactgcagaggagtctattgcaggtcagctagcccctgatgccacc
ggtacccttctagatgttgtttatgatgcagagtgcttgcagcttgcccgagacatgcag
gacatgaggatcaggaagaagaagcggcagaccattagacctctccctggcagcctgtac
ctggccaagacatctggggtgtccaggctgaccctcagagaggctgttggaggttggcac
cctgtacaacacacgcacaaacagctgtatggctatggagtgcaccggcatgtttgggat
atcagcagtgagagtgctgaggcgttccgctttgtttgccgacacttcttcagacgcgag
gcgtttgtagaggggtgcattcagctggccgacgggggttggctcattcctcgcaacgat
ggaactgcagggaaacatgagttccacagagcattgtgtgacagccctggcgtggacccc
aagctgatcagtgaggactgggtgttcaaccactaccgctgggtggtgtggaaacgggcc
tgcatggagagggcattcccagaggtgatgggcagcctctgtctcacaccagaacaggtg
ctcctacaactgaaatacaggtacgacttggaggtggacaacagcaagaggtcagctcta
aggaagatcatggagagagacgacacggcagtcaagaccctggtgctttgtgtatgtggt
gttgtcaccaaaggccataacccaacaaggcagagctggagtgagaccaagaccaaaacc
ccacccgggagcgccgcagggtctaaagcgaagtcgtcccctgtaggcttgatctggctg
acggatggctggtacgccatcaaggcccagctggacgtcccactgaccgccatgctccac
cggggccgcctggcgattgggggaaaggtgctggtccacggggccgagttggtgggatct
caggatgcctgctccccactagaggctcccgactccctcatgttgaagattggggccaac
ggcaccagagcggcgcgttggtacaccaggctagggttctacagcaaccctagtccgttc
ctcctccccctctcctccctctacagcaacggaggcaccgtgggctgtgtggacattgtg
gtgctgaggagctaccctacccagtggatggagaagaagtcggatggagggtttgtgttc
cgcgcaggccgtgcagaggagagggaggcacggcgtcatggcaacgccaaacacagagcc
atggagatactgttcgccaagatccaggcccagtttgagaaggaggaggatgttacaaaa
ccttttccgcctactgaacatcacccaacagtttgcggtaaacccagaggccggagacgg
accctgcgtggtcgagacattgagacactgctggacggggaggagctgtacgacgcggtg
gagaatgacccagtttatttggagggccgtctgagtgaggagcaacgggaggcgttgaac
agctataggcgttgtgttggtgagaggaggcaagaggcactgcaggagcggtttcgccag
gctctggaaagcacccaggagggcgagggcaggagctgtcacaaccgagacgtgaccccc
atctggaagctcagcatcgctgactccagggccaagccgggcagcaatgcagtgtacctg
ttgaatatctggcgcccctccatggatctgcagtccttgctgaaggagggctgtcgatac
agggcctaccaactatccacgtcggagggcaagaaacgagccggtaatacctccattcag
ctcaccgccaccaagaaaacccagttccagaatttacaggcttctgcagggtggttgtct
gagattttccaaccccgagaggcggtcggcttccgcgttctcctgaacttaaagccgctc
tgtggagaggtggatctggtaggctacgtcatctccatcacagacagacaaggtcactct
ccagtggtgtatctagtggatggctggctggactttgtcgaggtgcgctgctgcagcagt
ctggtccagcagggcttggaggaggtggtcaagcctttggctctggtggccctcagtaac
cttcagctcagagcccatccctcctcccccacccccatccgcagcgccatccctggccta
tacgctggagatctagtctcgttttccaccaaccctaaggaaccacatctacaggaggct
gctgctcaactcaggacccttgtccagggccaggaacacttcttcaggactgcagaggag
aggttatctaacttaatccaggtgtctgtccagtgtcttcctccgctgccatggaaagca
gatgccaaaccagattcaaggactactatgaaaccccagcagtcagttcgaagcgttggc
cccttcacccctctgaacagcgtcgtcccacctccacccgcctgcttctcagggggggac
aacaaagaccccaagagcttgaaaagaaagaggggcctggactacctgtgtcgcatcccc
tctccccctccactctgccccttgggcaccatgacattaccctcgccgtgcgtcaacaag
accttcaacacccctcggagggctgagacccaccggatcctaaagacacctctggccccc
gctccacagcatgtccacctgcccctagaggatgagtgggtggaggatgaagagctgttc
atgattgacactcaggccttacacgatggcatagagagagacacgtga

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