Oncorhynchus mykiss (rainbow trout): 110490059 Help Entry 110490059         CDS       T07259                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04382   Cornified envelope formation omy04510   Focal adhesion omy04512   ECM-receptor interaction omy04518   Integrin signaling omy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110490059 (col4a3)    04518 Integrin signaling     110490059 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110490059 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110490059 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     110490059 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:omy04147]     110490059 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:omy00536]     110490059 (col4a3) Exosome [BR:omy04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110490059 (col4a3) Glycosaminoglycan binding proteins [BR:omy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110490059 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110490059 NCBI-ProteinID:  XP_021418860 LinkDB All DBs Position 15:complement(40350695..40474422) Genome browser AA seq 1669 aa AA seqDB search MTDFLTFSPLLLSVLLLLLSGIITPAYTDDVCSCTGKSRCHCDGVKGSKGEPGYPGSDGL PGVVGYPGFEGNPGPFGPKGNLGFPGLSGPKGSRGLPGKPGFSGPPGQPGIPGNEGPMGP SGTPGCNGTKGDSGYPGLPGVPGPVGLPGVHGLPGFKGDSYYFPPAAEVDGHLGPQGRDG VKGQRGLPGRPGLPGLEGPSGTPGLPGLTGVQGEKGQEGPSPVIPGPRGQKGDQGPPGIP GQKGIKLYAEGPKELKGEPGDTGEKGCTGQHGLPGRRGYKGNKGDQGEPGALGKPGKDGD HGTYGIQGEKGDVGYQGPPGTEGSMGDKGDRGPTGPPGDLIQLNGRIKGLQGFPGPLGPP GYTGNQGVIGFPGMKGEPGLSFPGSPGNPGPPGLAGDKGERGEPAPNIIGPPGPTGPPGK DGPIGDRGPPGIPDLLRGNPGPPGPKGIKGISGQPGDRGGFGETGEKGDVCRLCMPTNVN PGPPGPAGEPGRPGDTGRDGDPGSKGSRGVKGLGGPPGPQGPYGLPGVPGSTGPKGDKSP MSPGDRGPVGSPGAPGVPGSDGTDGVPGYPGLKGQPGLKGNPGPPGPKGDRGDAGSQGIR GRTGQMGTQGPPGVGPPGGPGQKGNLGVQGLRGRPGDPGEKGSAGETVTTTGDPGLKGEK GQQGNPGPSGNPGINGYPGFPGNFGAKGDRGLSVRGPPGNTGPKGEKGQPGVAGAPGIGS MGRPGPSGAPGMPGPKGDFRPGLPGLPGRPGPPGEDGSLGLTGDSGLPGLGRSPGLPGRD GPQGDRGSKGAEGLPGLPGVAGECTLGIPGTPGAVGLKGIIGLTGTRGQKGVQGDSGLPG RGAPGLIGPFGRPGFDGPPGPGGAAGLNGFRGRDGVPGLPGLRGDMGPSGACGTPGPDGG PGPGGRLGPKGLMGADGVKGRVGARGPVGDSGAPGDIGVTTYIDVPGDPGDPGPTGLRGL TGAKGDLGVIGHNGASGKDGIPGSAGPQGAVGDPGRDGQKGSPGFNGNPGVAGDMGVPGV KGEKGGTGGRGEPGSSGRPGPNGVNGVKGEPSLPGPGAKGRQGEKGVPGFPGFPGEKGEM GVAGRFGTLGAIGPTGPKGREGLQGSRGPPGPAGEKGINGLPGNAGCHGQNGLQGSPGLA GDPGTAGPRGSQGRDGIPGPAGEKGDMGAPGIGPKGTDGKTGQSGLKGDVGIPGRFGPPG PSGLLGDIGPPGPPGPMGLSGSPGRDGMCFEGLKGDRGQNGVPGPQGMQGPRGPPGPPGP GFKGDKGNKGAMGLMGTPGYRGDTGVQGRLGNDGRPGGLGVKGEMGQLGDIGPNGQKGDA GPAGPVGCLGQKGQSGAPGPKGKDDLTMAVLIPGEQGLPGDLGGRGEPGPTGAQGRNGPP GLPGPKGVLGLDGPIGLPGFQAAKGDRGLPGPQGIQGEQGTPGAKGPRGSPGPYFAGPIE DGFLFTRHSQRQNVPLCPGGSNFIYSGYSLLFINGNNRGHGQDLGTLGSCLPRFSTMPFL FCNTDSTCRYASRNDYSYWLSTDEAMPSDMALISGGSLESYVSRCAVCETKANIIAVHSQ TNQIPVCPRGWLSLWAGYSFVMQTGAGAEGSGQPLASPGSCLEEFRKIPFIECHGRGTCN YYTDSYSYWLASLDPENMFSKPRPQTVKGDCPGSIVSRCQVCMKQWQRP NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atgacagactttctcactttttccccactgctcctgagcgtcctgttgctactgctcagc ggcatcatcacacctgcatacacagatgatgtgtgtagctgcaccggaaagtccaggtgt cactgtgatggagtaaaaggcagtaaaggtgagcctgggtatccaggttctgatgggttg ccaggagtggttggttatccaggttttgaaggtaatcctggaccttttggccctaaggga aatcttggctttcctggattgtcaggacccaaaggctcacggggtctccctgggaaacct gggttctctggaccacctgggcagccaggaatcccaggaaatgaaggaccaatggggcca tcaggaaccccaggatgcaatgggacgaagggggacagtggatacccagggttacctggg gtgccgggacctgttggattaccaggtgttcatggattgccaggatttaagggagactcc tactacttcccacccgctgctgaggttgatggacatcttggaccacaagggagagatggt gtcaagggtcagcgagggttacctggacggccgggtcttcctgggctggagggaccgagc gggactccaggattacctgggttaacaggtgtacagggagagaagggccaggaaggtcca agccctgtaattccaggtccaagaggtcaaaagggtgaccaaggccctcctgggatacct ggacagaagggcataaagctgtatgcagagggacccaaggaactgaagggggagccaggt gatacaggagagaaggggtgtactggccagcatggtctccctgggcgtcgtggatataaa gggaacaaaggcgaccaaggagaacctggggctctggggaaacctgggaaagatggggac catgggacctatggaattcagggtgagaaaggtgatgtgggctaccagggacctcctgga acagaaggttcaatgggtgacaaaggtgaccgcggacccacaggtcctccaggggatttg attcaactcaatgggagaatcaaaggcttgcagggttttcctgggcccctcggaccccct ggctatactggtaatcaaggtgtgattggttttcctggaatgaagggggaaccagggttg tctttccctgggtcccctgggaatcctggtccccctggtttagctggggataaaggggag aggggggagcctgcccctaacataattggcccccctggacccactggcccccctggaaaa gatggccccataggcgaccgtggtccccctggaattccagatctgttgagaggcaaccct ggaccacctggtcctaaaggcatcaaaggaatctcaggacaaccaggagatagaggcggg ttcggagaaacaggtgagaagggtgatgtctgtcgactctgcatgccgactaatgtgaac cctggaccaccaggacctgccggagagcctggtaggcctggagatacaggtcgagatggt gatcctggatccaagggatctagaggagtcaaaggtcttggaggtccaccaggtccacag ggtccctatggtttaccaggtgtgccaggttctacaggacccaagggggacaaaagtccc atgtccccaggagacagggggcctgttggctcacctggggctccaggagttcctgggagc gatgggactgacggggtccctggatacccaggactgaaaggccagccagggctaaagggc aaccctggacctccggggcccaagggtgatcggggcgatgccggctctcagggtatacgt ggacggacaggccagatggggactcagggccccccaggtgtggggcccccagggggccct ggacagaagggcaacctgggggtgcaaggcctgcgagggagacctggagatccaggagag aaaggctcagcgggtgagacggtaacaaccacaggagacccaggactgaagggagagaag ggtcaacaaggcaacccaggaccttcagggaatcctggtataaatggctatcctggcttc cctggcaatttcggcgccaagggggatagaggtctgtctgtccggggccctcctggcaac actgggcctaaaggtgagaagggccagccgggggttgctggtgccccagggattggtagt atgggacgaccaggaccatccggagctcccgggatgccaggccctaagggtgatttcaga ccagggctcccagggctgccaggtagaccaggccccccaggggaggatggttctctgggg ctgactggagactctggtctgcctgggcttggtagatcgcctggcctaccaggaagagat ggtccacagggagacagaggcagtaaaggtgctgagggcttgcctggtctgcctggggtt gctggggagtgtacgctaggcattccaggcactccgggggctgtaggtctcaaaggaatc attggcttaacagggaccagaggacagaagggggtgcagggcgattcaggtctgcctggc agaggggccccaggattgattggaccgtttggacggcccgggtttgatggacccccggga cctgggggggctgccggcctgaatggattcagaggaagagatggtgtacctgggttacca ggcctgagaggagacatggggccatcaggagcgtgtggtacaccaggaccagacggaggc ccaggaccagggggacgacttggccctaaaggtctgatgggtgctgatggggtgaagggc cgtgtaggagccaggggacctgtgggagattctggggctcctggagatattggagtcaca acatacatcgatgtccctggggaccctggggacccaggacctacaggtctaaggggctta acaggtgccaaaggagatctaggtgtgatagggcacaacggagccagtggcaaggatggg attcccgggagcgccgggccgcaaggtgctgttggcgacccaggcagagatggccagaaa ggaagtcctggtttcaatggaaatcctggagtcgcaggagatatgggtgtgccaggtgta aagggtgagaaagggggaacaggaggtcgtggagagcctggttcatcgggaagaccaggt ccaaatggagtaaatggagtgaaaggagagcccagcctccctggaccaggagctaaagga cgacaaggagaaaagggagtgccagggtttccaggttttccaggagagaagggggagatg ggtgtagcagggaggttcggaaccctgggagccatcggccccacaggacccaagggaaga gaaggtctacagggatcacgaggacctccgggaccagccggggagaagggcattaatggt ctcccaggcaatgctggctgtcatggccagaatggcctgcaagggagcccaggattggct ggtgacccagggactgcaggccccagaggttcccagggtagagacggcatccctggccca gcaggagagaaaggagacatgggagcccctggcattggaccaaaaggcacagacggaaag acgggccaatctggacttaagggggatgtggggatacctggccgctttggccctcctggt ccctcagggcttttgggggacattggacctccaggcccccctggtcctatgggactgtct ggaagtcctggccgggatggaatgtgctttgaagggctaaaaggagaccgtggacaaaat ggtgtccctggaccccaaggtatgcaggggccacggggacctcctggtccaccaggacct ggctttaaaggagataaagggaacaaaggtgccatgggtctcatgggtacgcctgggtac agaggagacacaggggtacagggcagactgggtaatgatggcagaccaggtggtttggga gtcaaaggggagatgggacagttaggagacatcggaccaaacggtcagaaaggagatgca ggacctgcaggacctgtaggttgccttggacagaaagggcagtctggagcaccagggcct aaggggaaagatgatctcaccatggcggtactgatccccggagaacaggggctgccgggt gacctggggggcagaggagagcctggacccacaggagctcagggacgcaacggaccacca ggactcccaggtccaaaaggtgtcttgggcctagatgggccaataggactgcctggattc caggcagccaagggagacagagggttacctggaccacaaggtatccaaggtgagcagggg actccaggagccaaaggcccccggggctctccaggtccttactttgccgggccaatagag gacggcttcctattcacccgtcacagccagagacagaatgtgcccctgtgcccagggggc agcaacttcatctactccggatactccctcctcttcatcaacggcaacaacagaggtcat ggccaggatctgggtacactgggaagctgtctgcctcgtttctctaccatgcccttctta ttctgcaacacggacagcacgtgccgctacgcctcccgtaacgactactcctactggctg tccacggatgaggccatgccaagcgacatggccctcatctctggtggttcactggagagc tatgtcagcaggtgtgcagtgtgtgagacaaaagcaaacatcatcgctgttcacagtcag acaaaccaaatccctgtttgtccacggggctggctctctctctgggctggctactctttt gtcatgcaaacaggggctggagcggagggctctggccagcccctggcctctccgggctcc tgcctagaagagttccggaagattcccttcattgagtgccatgggcgagggacatgcaac tactacactgactcctacagttactggctggcctccctggaccctgaaaacatgttcagt aaacccaggcctcagacagtgaagggagactgcccgggtagtatagtcagtcgttgtcag gtctgtatgaagcagtggcagcgaccctaa

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