Oncorhynchus mykiss (rainbow trout): 110490084
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Entry
110490084 CDS
T07259
Name
(RefSeq) high mobility group-T protein-like
KO
K10802
high mobility group protein B1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410
Base excision repair
omy04140
Autophagy - animal
omy04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110490084
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110490084
09143 Cell growth and death
04217 Necroptosis
110490084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110490084
03400 DNA repair and recombination proteins [BR:
omy03400
]
110490084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110490084
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
110490084
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110490084
MMR (mismatch excision repair)
Other MMR factors
110490084
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110490084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
110490084
NCBI-ProteinID:
XP_021418911
Ensembl:
ENSOMYG00000046666
LinkDB
All DBs
Position
15:complement(42041099..42043969)
Genome browser
AA seq
193 aa
AA seq
DB search
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFE
DMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDDDD
EDDEEDDDEDDDE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatcctaggaagccgagaggcaagatgtcctcatatgcttacttcgtgcag
acctgcagggcggagcacaagaagaaacagcccgaagccagcgtcaacttcgccgagttc
tccaagaaatgctcagagcgatggaagcccatgtctcctaaagaaaaaggaacgtttgag
gacatggcaaagcaagacaaggtccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggtttaaggatcccaatgcccccaagagaccgccgtctgcg
ttcttcatcttctgtgctgacttccgggccaagataaagagcgagcacccaggcctgtcc
attggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccgtacgagaagaaggcagccacgctgaaggagaaatacgacaaggatattgcatca
taccgcaccaatggtagagtggatactgcctcctccgcagctgctgatgacgacgacgat
gaagatgatgaggaggatgacgatgaggatgatgacgagtag
DBGET
integrated database retrieval system
