Oncorhynchus mykiss (rainbow trout): 110490150
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Entry
110490150 CDS
T07259
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110490150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110490150
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110490150
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Paralog
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110490150
NCBI-ProteinID:
XP_021419029
Ensembl:
ENSOMYG00000022721
UniProt:
A0A8C7RGZ2
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Position
15:45762776..45790354
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AA seq
620 aa
AA seq
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MNVQAGLSNGKNSSRLKDLVPVPQPQSEEKMQERGQWSNKLEFILSVMGSIIGLGNMWRF
PYLCYKNGGGAFLIPYLIFLFTCGIPVFFLETALGQYTSEGGITCWRKISPLFEGLGYGT
QIIVALLNSYYIVVLAWGIFYLSFSFSWELPWSSCNNTWNTENCVEFQRRNYSVNYTLPE
NSTSPVIEFWERRALRLSSGIDHMGSLNWDLAFCLAIAWVMCYFCIWKGVKSTGKVVYFT
ATFPYLMLIVLLIRGVTLPGADLGIKFYLYPDLSRLADPQVWMDAGTQIFFSYAMCLGSL
IALGSYNKYNNNCYKDCLALCFLNSGTSFVAGFAIFSILGFMAYEQNVPISEVAESGPGL
AFIAYPRAVAMMPFSSLWAVFFFIMIILLGLDSQFVCVESLTTAMVDMYPEVFRRKNRRE
LFLALVAFISFLMGLIMLMEGGLYVFQLMDYYAASGMCLLFMAIFETVSIAWVYGVDRFY
DNIEDMIGYRPGPYIKYCWLYVTPATCVATFAFSLIKYTPLKYNNEYVYPWWGYVIGWLL
ALASMVCIPFWMIYKLSTTEGTFRERIHILLQPSNDLPKSKREQERMLATFDPKGEEGME
PVGVPIKDGYLPVGVKDSNC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcaagcgggcctctcaaatggcaagaacagcagcaggttgaaggacctggtc
cctgtccctcagccccagtcagaggagaagatgcaggagagggggcaatggagcaacaaa
ctggagttcatcctgtctgtgatgggatccatcatcggcctggggaacatgtggcgcttt
ccttacctctgctacaagaacggaggaggtgcatttctcatcccctacctgatcttcctg
ttcacctgtggcatacctgtgttcttcctggagactgctctgggccagtacaccagtgag
ggaggcatcacctgctggaggaagatcagtccactctttgagggtcttggctacggcacc
cagatcattgtggctctgctgaactcctactacattgtggttctggcttggggaatcttc
tacctgtctttctccttctcctgggaactcccttggtcctcctgtaacaacacctggaat
acagaaaattgcgtggagtttcagaggaggaactattctgtcaactacaccctgcccgaa
aactccacatcccccgtcattgaattctgggagcgaagagccttgaggctgtcgtctggc
atcgaccacatgggctctctgaactgggacctggccttctgtctggccatcgcctgggtc
atgtgttacttctgcatctggaaaggggtcaaatccactgggaaggtggtgtacttcaca
gctaccttcccctacctgatgctaatagttctgctgattcgtggcgtcactttacctgga
gcggacctagggatcaagttctacctttaccctgacctgtcaagactagcagaccctcag
gtatggatggatgcaggcacccagatcttcttctcctatgcaatgtgtctaggctccctc
atagcattggggagttacaacaagtacaacaacaactgctacaaagactgcctggccctg
tgcttcctaaacagtgggacaagctttgtggcaggctttgccatcttctccatcctgggt
ttcatggcttatgaacagaatgtccccatctcagaggtagcagagtctggtcctggcctg
gccttcattgcatacccccgtgctgtggccatgatgccgttttcttcactatgggccgtc
ttcttctttatcatgatcatcctgctagggttggacagtcaatttgtgtgtgtagagagc
ttgacaacggccatggtggacatgtatcccgaggtgtttcgtcgtaagaaccgcagggag
ctctttctggctttagtggccttcatctccttcctcatgggcctgatcatgttgatggag
ggtgggttatatgtattccagctgatggactactatgctgctagtggcatgtgtcttctc
ttcatggccatctttgagacggtctccatcgcatgggtctatggtgtcgaccgcttctat
gataacatcgaagacatgattggctaccgtccaggaccttacattaaatactgctggctg
tatgtcaccccagccacatgcgttgcaacctttgcattctccctcatcaagtacacccct
ctgaagtacaacaatgagtatgtgtacccctggtggggctatgtgataggctggctcctg
gctcttgcctccatggtctgcatccctttctggatgatctacaaactctccaccacagaa
ggaacgttcagagagcgcattcacatcctcctccagccctctaacgacctacccaaatcc
aagagagaacaggagaggatgctggccacctttgaccccaagggcgaggaaggcatggag
ccagtaggcgtaccaatcaaagatggctacctcccagtgggggtgaaggactcaaactgc
taa
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