Oncorhynchus mykiss (rainbow trout): 110490193
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Entry
110490193 CDS
T07259
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110490193
03015 mRNA surveillance pathway
110490193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110490193
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110490193
mRNA cycle factors
P-body specific factors
110490193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110490193
NCBI-ProteinID:
XP_021419106
Ensembl:
ENSOMYG00000021683
LinkDB
All DBs
Position
15:complement(48444455..48464737)
Genome browser
AA seq
1304 aa
AA seq
DB search
MPAEGKRSLNMDDKEVSSFSNKEKDRDADRRPASSRDKVKDEAKMSGKKDIGKAAEEKRR
RLEEDKRKKEEKERKRKEEEKQKAEEEQRKKEEEEKKQQEEQERKVQEEEAKRQREEEAA
QLKEKEEGHQLHQEAWERHQCRKELRVRNQNAHEGRPEETFFSRLDSSLKKNTAFVKKLR
TLTEQQRDALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPL
LLQAWKRHFEARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGTDR
ETHTHVSVVISFCKHCGDDIAGLVPRKVKAAREKFGLAFPPSEIINTEKQQPFQNLLREY
FTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQHEEFATSYQKLLANTQSLADF
LDENMPELPLDKTVQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENMVDLKAFVP
AILFKDNEKCKDKEEAAAKEAKDAAATTEELELELEALDIADDPLELDGPDEAENEAELA
KKLLDEQGKDEEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSN
RRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFRFHIRKKDQINI
ETKNKTVRFIGELAKFKLFSKTDTLHCLKMLLSDFSHHHIEMACTLLETSGRFLFRSPDS
HLRTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPMEKTVRKKRPPLQEYIRKLLY
KDLSKVTTEKVLRQMRKLPWQDPESKGYLICCMVNIWNVKYNSIHCVANLLAGLVAYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLFSFISFG
VNPDGGPSPLDPPEHLFRIRMVCTLLDTCGQYFDRGSSKRKLDCFLIYFQRYIWWKKSVE
VWSAEHQFPIDIDYMISDTLELLRPKMRLCISLEDSARQVTELEREFLVKLGLAMDGQKD
GRPSSAMGSEGEALDEDDDDDDEEGGADTEEQSGNESEMNEPEEEEGSENEEEEREEEEE
ENTDYLTDSNKENETDEDNNEVTIRGGGLKHVACAEDEDFIQALDKMMLENLQQRSGEAV
KVHQLDVAIPLQLKSQLKKGPGGPVCSGEGDADISDTMQFVMLTRKGNKQQFKILNVPLS
SHLAANHFNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMASLAQRPAPANTNRERRPR
YQHPKGAPNADLIFKTGGRKQETKQERIERYEKRDRQERQEKHE
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgagggcaagagatcattaaacatggatgataaagaggtgagctcctttagt
aacaaggagaaagacagggatgctgatagacggcccgcctcctcccgggataaagtgaag
gatgaggcaaagatgagtggcaagaaagatattggtaaggctgcagaggaaaagaggagg
cggcttgaggaggacaaaagaaagaaggaagaaaaagagcgaaaacgaaaagaggaggag
aaacagaaggcagaggaggagcagaggaagaaggaggaagaggagaagaagcagcaggag
gagcaggagaggaaagttcaggaggaggaggccaagagacagcgtgaagaggaggcagct
caactcaaagagaaggaggagggccaccagctccaccaggaggcctgggagcgccaccag
tgccggaaggagcttcgcgtccgcaaccagaacgcccacgagggccgtcccgaggagacc
ttctttagccgccttgactccagcttgaagaagaacacagccttcgtcaagaagctgcgc
acgctcaccgagcagcagcgcgatgccctctccaacgactttggctcgctcaacctcagc
aagtacatcggcgaggcggtgggctctgtggtggaggccaagctgaagatctctgacgtg
ggctgcgccgtgcacctgtgctccctcttccaccagcgctatgccgaattcgccccactg
ctcctccaggcctggaaaaggcactttgaggcgcgcaaggaagagaaggcacccaatgtg
agcaagctgcgcaccgacctgcgcttcatcgcagagctcaccatcgtaggcctgttcact
gacaaggagggcctgtcgctcatctacgagcagctgaagagcatcatcgggacggaccgc
gagacacacacgcatgtgtcagtggtcatcagcttctgtaagcactgcggggacgacatt
gcgggcctggtgcctcgcaaggtgaaggctgcacgggagaagtttggcctggccttccct
cccagcgagatcatcaacacggagaagcagcagccctttcagaaccttctgagggagtac
ttcacctcgctcaccaagcacctgaagaaggaccaccgcgagctgcagaacattgagagg
cagaacaggcgtatcctccactccaaaggggagctgagtgaggacaggcacaagcagcat
gaggagtttgccacgtcctaccagaagctgctggctaacacccagtctctggctgacttt
ctggatgagaacatgccagagcttccactggacaagactgtgcaggaagagcacggccct
ggcattgacatcttcacccctgggaaacccggggagtatgacctggaggggggcatctgg
gaggacgaggatgccaggaacttctacgagaacatggtggacctgaaggccttcgtcccc
gccatcctgttcaaagataacgagaagtgcaaggacaaagaggaggctgctgctaaagag
gctaaagatgctgcggccaccacagaggagttggagttggagctcgaggctctagacatc
gctgatgaccctctggagctggatggacctgacgaggcagagaacgaagcagagctcgcc
aaaaaactgttggacgagcaaggtaaagatgaagaacaagaggatgaggaggcaagcacc
gggtcccacctgaagctcattgtggacgccttcatccagcagcttcccaactgtgtcaac
agagacctcatagacaaggctgccatggatttctgcatgaacatgaacacaaagtcaaac
aggaggaagctggtccgagctctcttcaccgttcccagacaaaggttggatctgctgccc
ttttactcccgtctggtggccacccttcacccctgcatgtccgatgtggccgatgacctg
tgctccatactcaaaggagacttcaggttccacatccggaagaaggaccagatcaacatc
gaaacaaaaaataaaactgtgaggtttatcggggagctggccaagttcaagttgttctca
aaaacggacactctgcattgtctgaagatgctgctgtcagacttctcccatcaccacata
gagatggcctgcaccctgctggagaccagtggacgcttccttttcagatcccctgactcc
cacctccggaccagcgtccttctggagcaaatgatgcgtaagaagcaggcgcagcacctg
gatgctcgctacgtgaccatggtggagaatgcctactactactgcaaccccccgcccatg
gagaagactgtcaggaagaagaggcccccgctgcaagagtacatccgcaaactgctctac
aaggacctctccaaggtcaccacggagaaggtgttgaggcagatgcgtaaactcccctgg
caggacccagagtctaaaggctacctgatctgctgcatggtcaacatctggaacgtcaag
tacaacagcatccactgtgtggccaacctgctggccggccttgtggcctaccaggaggac
gtgggcatccacgtggtggacggggtcctagaggacatccgcctgggaatggaggtgaac
cagcccaagttcaaccagcgtcggatcagcagtgccaagtttctgggggagctctacaac
taccgcatggtggagtcagcggtcatcttccgcaccctcttctccttcatctcgttcggg
gtgaacccggatggcggccccagccccctggacccccccgagcacctgttccgcattcgc
atggtctgcaccctgctggacacctgcggacagtactttgaccgcggctccagcaagagg
aagctggactgcttcctcatctacttccagaggtatatctggtggaagaagagtgtggag
gtgtggagtgcagagcaccagttccccatcgacattgactacatgatcagtgacaccctg
gagcttctccgaccaaagatgaggctctgcatctccctggaagactccgcacgacaggtc
accgagctggagagggagttccttgttaaactgggactggccatggatgggcagaaggac
ggccggccctccagtgccatggggagcgaaggcgaggctttagacgaggatgacgatgat
gacgacgaagagggaggggcggacacagaggaacagtctggaaatgagagcgagatgaac
gagccagaggaagaagaagggtctgagaatgaggaagaggagcgggaggaagaggaggag
gagaacaccgactatctgaccgactccaacaaggagaacgagacagacgaggataacaat
gaggtgaccatccgtggtggcggtctgaagcatgtggcatgtgctgaggatgaggacttc
atccaggctctggacaagatgatgctggagaacctgcagcagcggagcggggaggcggtg
aaggtgcaccagttggacgtggccatccccctgcagctgaagagccagctgaagaaaggt
cctggtggacccgtctgctctggagagggggacgcagacatctcagacaccatgcagttt
gtcatgctcacacgcaagggcaacaagcagcagtttaagatcctgaacgtgcctttatct
tcccacctggctgccaaccacttcaaccagcagcaggcagagcaggaggagaggatgagg
atgaagaagctcactctggacatcaacgagagacaggagcaagaggactaccaagaaatg
atggcgtctctggcccagcggcccgctcctgccaacaccaaccgggagcggcggccgcgc
taccaacaccccaaaggggcacccaacgccgacctcatcttcaagaccggaggaagaaag
caggaaacaaagcaggagagaattgaaaggtacgaaaagcgtgacagacaagagaggcaa
gagaaacacgagtga
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integrated database retrieval system
