KEGG   Oncorhynchus mykiss (rainbow trout): 110490196
Entry
110490196         CDS       T07259                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110490196
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110490196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:omy03016]
    110490196
Transfer RNA biogenesis [BR:omy03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    110490196
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 110490196
NCBI-ProteinID: XP_021419116
Ensembl: ENSOMYG00000021841
LinkDB
Position
15:48492575..48509832
AA seq 927 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWELADQLLQLKQDVESCYF
AAQTMKMKIQMSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLAPLYVTDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQ
HFQGLLDIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLL
SQDPRNGKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADN
RIVERCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEG
CRQGLLDMLQALCMPTFQLLEQTNGLRNHPDTVDDLFRLATRFVQRSPITLLSSGIIVHI
IQCAIAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQ
LMHTCCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLT
DFHKQVTSAEECKQVCWAIREFTRLFR
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgttcaggctctttatcatgatccg
gaccccgccggcaaagagcgagcctctgtgtggctgggggagctacagagatcgatgtac
gcgtgggagttggcagaccagctcctccagctgaaacaggacgtggaatcttgttacttt
gccgcccagaccatgaagatgaagatccagatgtcgttctttgagcttcccccagagacc
catatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcacccagctagctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccttgcgcatcggc
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggttacc
ctactgatgacgtgtgtggagaagtctggcagcaatgagaaaatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagttctggacagcaactttatggccaacaac
cagctcctcatggtccttttccaagtgctgcagagagacgagacgtccaccaacctgcac
gaggccgcgtccgactgcgtgtgttcagcactgtacgccatcgagaacgtggacacgcac
atgcccctggccctgcagctcttccagggcgtcctcacgctggagacagcctaccacatg
gccgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagactacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacaccctcaatatgaggtcgtggagatctcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagatactgatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtaattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaagggaaccctccctgggaggtgactgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagccccgctc
tatgtcacagaccccgtgctgaactacctgatgaagggcctgagggagaagaccctggct
tccgtggcggccaaggccatccataacatctgctctgtgtgtcgggaccacatggcccag
cacttccagggcctgctggacatcgcccgtgccctcgactccttcgccctgacgaccgaa
gccgccgtaggcctcctcaaaggtacagccctggtcctggctcgcctgcccctggagaag
atcgctgagtgtttgagtgacctgtgtgctgtgcaggtcatggccctcaaaaagcttctc
tctcaggaccccaggaatgggaaagctgctgaccccactgtctggctggacagactagcc
gtcatcttccgacacacaaaccccatcgtagagaatggacagacacacccatgtcagaaa
gttatccaggagatctggccggtcctatcagagactctgaacacacaccaggctgataac
cgcatcgtggagcgctgttgtcgctgcctgcggtttgctgtgcgctgcgtgggcaagggc
tctgcctctctactacagccactcgtcacacagatggtcagtgtgtatcaggtgtatccc
cactcctgcttcctgtatctgggcagcatcctggtggatgagtacggcatggaggagggc
tgcagacaaggtctactggacatgctgcaggctctttgtatgcccaccttccagctattg
gagcagaccaacggcctccgtaaccacccagacacagtagatgacctcttcagactcgct
accaggtttgtccagcgtagtcccatcaccctgctcagcagtggcatcatcgttcacatc
atccagtgtgccatcgcggccacgacactggaccaccgggatgccaactgcagcgtcatg
aagtttgtcagagacctcatccacacgggcgtcagcaacgaccacgaggatgactttgag
ctgcggaagcagctaataggccaggccatggggcagcacgggcagcagttggtcacccag
ctcatgcacacatgctgcttctgcctgccaccttacacactccccgatgtggctgaggtg
ctctgggagatcatggtgttcgacaggccgacgttctgccgctggctggagaatgcgctg
aaggggcttcctaaagagacgtcaggcggggcggtgaccgtcacacacaaacagctcaca
gacttccacaagcaggtcaccagtgcagaggagtgtaagcaggtgtgctgggctatccgg
gagttcaccagattgttccgatag

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