KEGG   Oncorhynchus mykiss (rainbow trout): 110490289
Entry
110490289         CDS       T07259                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:omy04054]
    110490289
Pattern recognition receptors [BR:omy04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   110490289
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_5 LRR_EndoS
Other DBs
NCBI-GeneID: 110490289
NCBI-ProteinID: XP_021419266
LinkDB
Position
15:complement(52653374..52656938)
AA seq 941 aa
MRAMFSLFLLIQSVSGWMHPKCHVYNSGEYFPTWNYCPLAEQYTAACRDVTAIEEDLLGL
PSNINTLCISMKRGENSSMSLGFFARFQYLEYLYIGGCFPQILPAGNSQGLQNLQHMHIN
GLVTGCCDCHIGPNTFRDLVKLSNLTIYGYRLSAMAPDVFHCLPQLQSVYIHEPCVENLS
EILCRIVNIISLTKLNVHAPNIRSLNQSNCSILKATESNLTSVNLDFGQINHIEEGALAC
LQNLTHFSGGLNQDVLLRLPLSGIKQIQVLYSYGSNSIDFESICNVVFLLSIKEIHFANV
NTSSLSMSSVELCIGLEYMGFDGPGAFHSSPHLKLNFISSLKNLKMLYVSGQAENSLDLC
SFRKQPITWLTELTFMSSNVQTLFAKRFSCLENLRSLDLSCSFISNIEDFAFFGLANLES
LDMTQNSITQLYANTFIGLHSLTLLDLRENPQIYNIEAMSFAQLTCLRQVFLGYLNYPPG
EPVIKLNLTLVFGDVLSHLTHLHISSGMRPMQLIIGSNITSKQNLSLQLKGQTVSFEDCD
RPFFQSVTHLHADAEEFLCGSEFMGKYFRSVETFVYRSKLSAKSVDLTSMNQLIHLRKLT
LVQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKYFKSLKTLYLRIENVYHVI
YSFTEPLSSLKYLILDTLQIFCSCDNAWLIAWAKRYRPVEVIMLNHEVMYNLEELICLSD
NGLDTPNFVKYTEANCTTEVGFVLFAATGLGVIFFMLVVLVHNLAGPYLLPLYYITLGWL
SEAMRSNTRGRYHYDAFVSYSGKDERWVVEELLPNLEKRGPPFLHLCLHSRDFQLGKDIV
ENITDSLYRSRRTLCLVSRHYLHSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPRRLS
AHHRLARLVKTRTYLDWPQDPHQHQAFWNRLWAKLKPPTEA
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgagagccatgttttccctgttcctgttgattcagagtgttagtggatggatgcatcct
aaatgccacgtttataacagtggggaatactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccatcgaggaggatctgcttggactt
ccctctaatatcaataccctctgcatatctatgaaacgtggggaaaatagttccatgtct
ctgggctttttcgctcgttttcagtatttggagtatctgtacattggaggctgttttcct
caaatccttccagctgggaatagccagggccttcaaaatctgcaacatatgcacattaat
ggattggtcactgggtgctgtgattgtcatattgggcctaacacattcagagatctagta
aagctaagtaatttgaccatatatggttataggctatcagcaatggcaccagatgttttc
cattgcctacctcaattacaaagtgtctatattcatgaaccctgtgtagagaatttgtca
gaaatactatgcagaatagttaatataatttcacttacaaagttaaatgtacatgcacca
aatatacgatcgttaaaccaatcaaactgctccatcttaaaagctaccgaaagcaatcta
acaagcgtcaatttagatttcggtcaaataaaccatatagaggaaggtgcactggcctgt
ctccagaacctgacacatttttctgggggcctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccaggtcttgtattcctatggtagcaatagcattgatttt
gaaagtatctgtaatgtagtgtttttgctttccatcaaggaaatacattttgccaatgtc
aatacaagcagcctctccatgtccagtgttgaattgtgcattgggctggaatatatgggc
tttgatggacccggagccttccattcttctccccatttgaaattgaattttatttccagt
ctcaaaaaccttaaaatgttatatgtatctggccaggcagaaaacagtcttgacctctgc
tcattccgaaaacaaccaatcacatggttaacagaactcactttcatgtcgagcaatgta
caaacgctttttgcaaaacggttcagctgtcttgagaacctgcggtctctagatttgtca
tgtagtttcatttcaaacattgaagactttgctttcttcggattggcaaatctggagtcc
ttagacatgacacaaaatagtataacccagttatatgcaaacacgtttattggtttacat
agtttgacattgttagacctcagggaaaatccacagatctacaatattgaagcaatgtct
ttcgcacaacttacgtgtctaagacaagtgtttctggggtacttgaactatccaccagga
gaacccgtgataaagctgaatctgacacttgtattcggtgacgttctgagtcacctgact
catctgcacattagttcaggtatgaggccaatgcagttgattattggcagtaacatcaca
tctaaacagaacctgagtctccaactcaaaggccagacagtgtcatttgaagactgtgac
agacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctttgtgga
tctgaattcatgggaaagtacttcaggtctgtggagacatttgtgtacagatcaaagctt
tcagctaaaagtgtggacttaacatcaatgaatcagctcattcacctgaggaaactgact
ctagtacaggtggatcttttaatacagcgttctgccgacatcatttttcacaacctgacc
aaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggtttaact
aaatactttaaatccttgaaaaccttatatttgcgtatcgagaacgtttatcatgtaatc
tacagctttactgaacctctctctagcctaaagtatttgatacttgatacattacagatt
ttttgcagttgtgacaatgcttggctcattgcatgggcaaagaggtacaggccggttgaa
gtgatcatgcttaatcatgaagttatgtataatttagaggagttgatatgcttgtcagac
aatggactagacacacctaactttgtcaagtacacagaagccaactgcacaacagaggtg
ggctttgtgctctttgctgcgactggcctgggagtcatcttcttcatgctggtggtgctg
gtccataatctggccggtccttacctcctccccctctactacatcacccttggctggctg
tcggaggcgatgcgatcaaacaccagggggcgctaccactacgatgcgtttgtctcctac
agtgggaaggacgagcgctgggtggtggaggagctactacccaacctggagaagaggggt
ccccctttcctgcacctctgtctgcacagcagggacttccagctggggaaggacattgtg
gagaacatcacagacagcctctaccggagccgtcgcacactctgcctggtcagtcgccac
tacctgcacagtaactggtgctccctggagatgaagctggccacctccagactgcaggtg
gaacaaagggacatcctcctcctggtcttcctggagaagatcccccctcgccggctgtct
gctcaccacaggctggctcgcctggtcaagaccaggacctatctggactggccccaggac
ccccatcagcaccaggcattctggaacagactgtgggctaaactgaaacctccaactgaa
gcctga

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