Oncorhynchus mykiss (rainbow trout): 110490289
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Entry
110490289 CDS
T07259
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110490289
Pattern recognition receptors [BR:
omy04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
110490289
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
110490289
NCBI-ProteinID:
XP_021419266
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Position
15:complement(52653374..52656938)
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AA seq
941 aa
AA seq
DB search
MRAMFSLFLLIQSVSGWMHPKCHVYNSGEYFPTWNYCPLAEQYTAACRDVTAIEEDLLGL
PSNINTLCISMKRGENSSMSLGFFARFQYLEYLYIGGCFPQILPAGNSQGLQNLQHMHIN
GLVTGCCDCHIGPNTFRDLVKLSNLTIYGYRLSAMAPDVFHCLPQLQSVYIHEPCVENLS
EILCRIVNIISLTKLNVHAPNIRSLNQSNCSILKATESNLTSVNLDFGQINHIEEGALAC
LQNLTHFSGGLNQDVLLRLPLSGIKQIQVLYSYGSNSIDFESICNVVFLLSIKEIHFANV
NTSSLSMSSVELCIGLEYMGFDGPGAFHSSPHLKLNFISSLKNLKMLYVSGQAENSLDLC
SFRKQPITWLTELTFMSSNVQTLFAKRFSCLENLRSLDLSCSFISNIEDFAFFGLANLES
LDMTQNSITQLYANTFIGLHSLTLLDLRENPQIYNIEAMSFAQLTCLRQVFLGYLNYPPG
EPVIKLNLTLVFGDVLSHLTHLHISSGMRPMQLIIGSNITSKQNLSLQLKGQTVSFEDCD
RPFFQSVTHLHADAEEFLCGSEFMGKYFRSVETFVYRSKLSAKSVDLTSMNQLIHLRKLT
LVQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKYFKSLKTLYLRIENVYHVI
YSFTEPLSSLKYLILDTLQIFCSCDNAWLIAWAKRYRPVEVIMLNHEVMYNLEELICLSD
NGLDTPNFVKYTEANCTTEVGFVLFAATGLGVIFFMLVVLVHNLAGPYLLPLYYITLGWL
SEAMRSNTRGRYHYDAFVSYSGKDERWVVEELLPNLEKRGPPFLHLCLHSRDFQLGKDIV
ENITDSLYRSRRTLCLVSRHYLHSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPRRLS
AHHRLARLVKTRTYLDWPQDPHQHQAFWNRLWAKLKPPTEA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatgttttccctgttcctgttgattcagagtgttagtggatggatgcatcct
aaatgccacgtttataacagtggggaatactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccatcgaggaggatctgcttggactt
ccctctaatatcaataccctctgcatatctatgaaacgtggggaaaatagttccatgtct
ctgggctttttcgctcgttttcagtatttggagtatctgtacattggaggctgttttcct
caaatccttccagctgggaatagccagggccttcaaaatctgcaacatatgcacattaat
ggattggtcactgggtgctgtgattgtcatattgggcctaacacattcagagatctagta
aagctaagtaatttgaccatatatggttataggctatcagcaatggcaccagatgttttc
cattgcctacctcaattacaaagtgtctatattcatgaaccctgtgtagagaatttgtca
gaaatactatgcagaatagttaatataatttcacttacaaagttaaatgtacatgcacca
aatatacgatcgttaaaccaatcaaactgctccatcttaaaagctaccgaaagcaatcta
acaagcgtcaatttagatttcggtcaaataaaccatatagaggaaggtgcactggcctgt
ctccagaacctgacacatttttctgggggcctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccaggtcttgtattcctatggtagcaatagcattgatttt
gaaagtatctgtaatgtagtgtttttgctttccatcaaggaaatacattttgccaatgtc
aatacaagcagcctctccatgtccagtgttgaattgtgcattgggctggaatatatgggc
tttgatggacccggagccttccattcttctccccatttgaaattgaattttatttccagt
ctcaaaaaccttaaaatgttatatgtatctggccaggcagaaaacagtcttgacctctgc
tcattccgaaaacaaccaatcacatggttaacagaactcactttcatgtcgagcaatgta
caaacgctttttgcaaaacggttcagctgtcttgagaacctgcggtctctagatttgtca
tgtagtttcatttcaaacattgaagactttgctttcttcggattggcaaatctggagtcc
ttagacatgacacaaaatagtataacccagttatatgcaaacacgtttattggtttacat
agtttgacattgttagacctcagggaaaatccacagatctacaatattgaagcaatgtct
ttcgcacaacttacgtgtctaagacaagtgtttctggggtacttgaactatccaccagga
gaacccgtgataaagctgaatctgacacttgtattcggtgacgttctgagtcacctgact
catctgcacattagttcaggtatgaggccaatgcagttgattattggcagtaacatcaca
tctaaacagaacctgagtctccaactcaaaggccagacagtgtcatttgaagactgtgac
agacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctttgtgga
tctgaattcatgggaaagtacttcaggtctgtggagacatttgtgtacagatcaaagctt
tcagctaaaagtgtggacttaacatcaatgaatcagctcattcacctgaggaaactgact
ctagtacaggtggatcttttaatacagcgttctgccgacatcatttttcacaacctgacc
aaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggtttaact
aaatactttaaatccttgaaaaccttatatttgcgtatcgagaacgtttatcatgtaatc
tacagctttactgaacctctctctagcctaaagtatttgatacttgatacattacagatt
ttttgcagttgtgacaatgcttggctcattgcatgggcaaagaggtacaggccggttgaa
gtgatcatgcttaatcatgaagttatgtataatttagaggagttgatatgcttgtcagac
aatggactagacacacctaactttgtcaagtacacagaagccaactgcacaacagaggtg
ggctttgtgctctttgctgcgactggcctgggagtcatcttcttcatgctggtggtgctg
gtccataatctggccggtccttacctcctccccctctactacatcacccttggctggctg
tcggaggcgatgcgatcaaacaccagggggcgctaccactacgatgcgtttgtctcctac
agtgggaaggacgagcgctgggtggtggaggagctactacccaacctggagaagaggggt
ccccctttcctgcacctctgtctgcacagcagggacttccagctggggaaggacattgtg
gagaacatcacagacagcctctaccggagccgtcgcacactctgcctggtcagtcgccac
tacctgcacagtaactggtgctccctggagatgaagctggccacctccagactgcaggtg
gaacaaagggacatcctcctcctggtcttcctggagaagatcccccctcgccggctgtct
gctcaccacaggctggctcgcctggtcaagaccaggacctatctggactggccccaggac
ccccatcagcaccaggcattctggaacagactgtgggctaaactgaaacctccaactgaa
gcctga
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