Oncorhynchus mykiss (rainbow trout): 110490309
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Entry
110490309 CDS
T07259
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110490309 (scube1)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
110490309 (scube1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
EGF
CUB
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
110490309
NCBI-ProteinID:
XP_036800500
Ensembl:
ENSOMYG00000036171
LinkDB
All DBs
Position
15:53585059..53728823
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AA seq
1046 aa
AA seq
DB search
MGSACFSWEVCLFFVLINTCEVTGDVGLADADECSEGTDDCHIDALCQNTPKSFNCICKP
GYKGDGKQCEDMDECENEYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECMDN
NGGCQQVCVNTMGSYECMCKQGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCTLTCNYGNGGCQHMCDDTDVGPVCGCHQKYALHSDSKTCIDL
CSVAPRKCRPEFHDDDERDEAAIESSEFNATSIADVDKRVKRRLLMETCAVNNGGCDRTC
KDTATGVRCSCPVGFTLQPDGKTCKGQCIDIDECQEATNNGGCDHFCKNTVGSFECSCQK
GHKLLTDERTCQDIDECSFERTCDHTCVNYPGNFDCVCQEGYTLYGLTHCGDIDECSINN
GSCEHSCVNTQGGYECLCPPGQKLHWNKKDCTKAVKCLTDGKPAPRAQLSCDKRGGVEVC
SLSCPSNALFLADSENSYTLSCGVPVQPGKAPQKRNATTALLTCADTLPPPIKQKARFKV
KDAKCHLRPRNKEKHREMSKPSLQGGPLPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEV
SHITAEFEMEMKEASGQCDCATSDSCNVECVRERMKQRLQSAMRTLRKSINKQQFYIQFS
GTEYEVAQKPALHVEQCSTGQVLRDGKCVSCGVGTYYSGDHDQCVVCPPGTYQDTMGQLS
CEPCPSTEGQGIAGAKNVSQCGGQCPAGQYSSDGFRPCNPCPLGSFQPEPGRVLCFSCGG
GLMTKYEGSVAFRDCEAKVHCAPGHHYNSSNHRCIRCPAGTYQSEFGQNYCITCPGNTTT
DFDGATNVSHCKNQVCGGELGDFTGFIESPNYPGDYPSNVDCIWTINPPHKRRILIVVPE
IFLPIEDECGDVLVMRKSALPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKG
FQVPYVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQ
ESKDMFPRSFIKLLRSKVTRFLRPYK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcttgtttttcctgggaagtatgtttgtttttcgtcctcattaatacttgt
gaggtgacgggggatgttggactcgcagatgccgatgagtgctctgaaggcacggatgac
tgtcacattgatgctctctgccagaatacccccaaatccttcaactgcatctgcaagccg
ggatacaagggagacggcaagcagtgtgaagacatggacgagtgtgagaatgagtacaac
ggaggctgtgtccacgagtgtatcaacatcccgggcaactacaggtgcacctgctacgac
ggattcatgttggcccacgacggacacaactgtctggacgtggatgagtgtatggacaac
aacggaggatgccagcaggtgtgtgtgaacaccatgggaagctacgagtgtatgtgcaag
caaggcttcttcctcagcgacaaccagcatacctgtatccaccgctccgacgatggaatg
aactgcatgaacaaggaccacggctgcgcccacatctgcagggagacccccaaggggggc
gtggcttgcgagtgccggcccgggttcgagctggcaaaaaaccagagagactgtacattg
acgtgtaactatgggaacggaggctgccagcacatgtgtgacgatacggatgtggggccg
gtttgtggctgtcaccagaagtacgccctgcactcagacagcaagacctgcatcgatctg
tgctctgttgcaccccgaaaatgtcgcccggagtttcacgatgacgatgagagagatgag
gctgcaattgagagctctgagttcaatgccacgtcaatagctgatgtggacaagcgggtg
aaacggcggcttcttatggaaacctgtgcggtgaacaatggcggctgtgaccggacgtgc
aaggacacggctacaggggtccgctgcagctgccccgtgggattcaccctgcagccagac
ggcaagacctgcaaaggtcagtgtatagacatagatgaatgccaggaggcgaccaataac
ggcggctgtgaccatttctgcaagaacacggtgggctcctttgagtgcagctgccagaag
ggccacaagctcctcactgacgagcgcacctgccaggatattgacgagtgttcctttgag
aggacctgtgaccacacctgcgtcaactaccctggcaacttcgactgtgtctgtcaggaa
ggatacactctgtacggcctcacacactgcggagacatagatgagtgcagcattaacaac
gggagctgtgagcacagctgtgtgaacacacagggaggctatgagtgtctgtgtccgccc
ggtcagaaactccactggaacaagaaggactgcaccaaggcggtgaagtgtttgaccgat
gggaagccagcgccgcgcgcccagctcagctgtgacaagagaggaggggtggaggtgtgc
tccctctcctgtccgtccaacgcactcttcctagcagactctgagaacagctacactcta
agctgtggtgtgccggtgcaacctgggaaggcaccgcagaagaggaacgccaccaccgca
ctgctcacctgtgcagatacgttacccccgcccatcaagcagaaggcccgcttcaaggtc
aaagatgccaagtgtcacctaagacccaggaacaaggaaaaacacagagagatgtccaag
ccgagcctgcaagggggtccgctcccgtgtactgacgactgccaggtgacctttgtcaat
ctgaagtgtgactcgtccaagaagcggcggcgtggacgcaagtccccttccaaagaggtt
tcccacatcacagctgagtttgagatggagatgaaggaagcctcaggtcagtgtgactgt
gcaacctcagactcgtgtaacgtggagtgtgtgagggagcgtatgaagcagaggttacag
agtgccatgcggaccctgaggaagtccatcaacaagcagcagttctatatccagttctct
ggtaccgagtacgaggtggcccagaaacctgcactgcacgttgagcaatgcagcaccgga
caggtcttacgggacggcaagtgtgtgagctgtggtgtggggacgtactatagtggagac
catgatcagtgtgtcgtgtgtccccctggtacataccaggacacaatgggtcagctgtcc
tgtgaaccctgccccagcaccgagggacagggcatcgccggggccaagaacgtctcccag
tgcggaggccagtgtccggctggtcagtattcgtcagatgggttccgtccctgtaaccct
tgtcccctgggctccttccagcctgagcctggccgtgtactctgcttctcctgtggaggt
ggcctcatgaccaagtacgagggctctgtcgccttcagggactgtgaggccaaagtccac
tgtgctcctggacaccactacaactccagtaaccaccgctgtatccgctgcccagccggt
acctaccagtcagagtttggacagaactactgcatcacctgccctggcaacaccaccacc
gactttgacggagccaccaacgtctctcactgcaagaaccaggtgtgtggcggtgagctg
ggagacttcacaggctttattgagtctcctaactaccccggggactacccgtccaatgta
gactgtatctggaccatcaacccccctcacaagagacgcatcctcatcgtggtgcctgag
atcttcctccccatcgaagacgagtgtggagatgtgctcgtcatgaggaagagtgccctg
cccacctccatcaccacctatgagacgtgtcagacgtacgagcggccaatcgccttcacc
tcccgctcccgcaagctctggatccagttcaagtccaatgagggcaacagtggcaagggc
ttccaagtcccctatgtcacctacgatgaggactaccagcagctgatagaggacattgtc
cgggatggcagactctacgcatcagagaatcaccaagagatactgaaagataaaaaactg
atcaaagccctgtttgatgttctggctcacccccagaactacttcaggtacacggcacag
gagtccaaagacatgttcccccgctcattcatcaaactgctgcgctccaaagtcacacgg
ttcctacggccgtacaaataa
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