Oncorhynchus mykiss (rainbow trout): 110490321
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Entry
110490321 CDS
T07259
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110490321
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110490321
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
110490321
NCBI-ProteinID:
XP_021419320
Ensembl:
ENSOMYG00000040526
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Position
15:54081785..54089932
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AA seq
955 aa
AA seq
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MVQLSPSPARDASPSPECSEKGRQGSPKAGSPKMGSHGGLSPLQLALGASTTIYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKFLLQTLLQHEHIRKDLLSAR
NPQLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLEGKNKAVAGTTYKVLK
AKLAKLMDCGYFDCVPPPPSKSPKEVEVPMTKKTVSETASLSTLMTSNKKDLPSREFLNR
HYLPDTDPNGCRDTPVTQNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVFISK
VPVTTKKENAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILPKDPTLRKQQ
LEDLMTKIRGSFSFMQDSLLDGEGSPTNGHPRLGRHASGSPSPLVQRESRRSPVDHLPKT
LHSTPLPSKLLPVDDEPNLTNGDGGSLESCDLDLTTEVLAHVTAIDPCLLLSESETACPS
PPAPPPFYCRESSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTPTQGQLFSTPPSR
RTLSMAPSVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSGNDLCYVTTSTQTPPDFAPL
EDEHLQSVNQSECLVGSGGQIFLSPSQSGGTMGRSDQSYYRGSVRGIARGGKGLVHSYFR
SSGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSGWSDSSQVSSPDREGNYS
LVDSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGT
LDQPITFDQLHSNLGEMFNTNVGRFICPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMV
SAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgcgtctccttcacctgagtgctccgag
aaggggaggcaggggagcccgaaggcaggtagccccaagatgggctcccatggtgggctg
agtcctctccagctagctctgggagcctccaccaccatctaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaaaaagatt
aaattggaagactacaggaagcgtttgaaacacggggaatcactcaatcaagaccagata
gatgcagtggagaagtatgacgaagtgatccacaacctgcagtttgcccaggagctgcac
aagaccctggggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaag
gagcagatggccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcaggaaggacctcctctctgcccgc
aacccccagctccaggttgcagagctacaaagcctgcttgagctcgctgaactactgggg
gtgaagagggacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctac
ctggacctgctggaggggaaaaataaagccgtagccggaaccacctacaaggtcctgaag
gctaagttggcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagc
aagagtcccaaggaagtagaggttcccatgaccaagaagacggtgtctgaaacagccagc
ctctctaccctaatgacgtcaaacaaaaaagacttgcctagcagagagtttcttaacaga
cactacctgcctgacacagaccccaatgggtgtcgagacactcccgttactcagaactgg
aaggctgagttccaggccatgaaggaacaggagccaccggactcgtgggatatggagtct
gactccactcagcctgtaatccagaaaccatggaggggggcggctgtgttcatatccaaa
gtgccggttactaccaagaaagaaaatgctgaacccaaacagagaagagcgaagtctaaa
agggagcgggacgccacagctgcacttcgtgtggacacccctgtggaggtgttcaactcc
cagtcttccttgcccaaggaccccatcctgcccaaggaccccaccctgcgcaagcagcag
ctggaggacctgatgaccaagatcagaggctccttcagcttcatgcaggattctcttctg
gatggagaaggatcgcccactaacggccatcctagactgggccggcatgcctctggatcc
ccctctccactcgtacaaagagagtcaaggagaagcccagtggaccatctccccaaaaca
ctgcattccactccattgccttctaaactcctccctgttgatgacgaacccaatctgacc
aatggagacgggggtagcctagagagctgtgacctggacctgactacagaggtcctggct
cacgtcacagccattgatccatgtctgctgctgtctgagagtgagactgcctgcccctct
cctccagctcctcctcccttctactgtagggagtcctccatctccatcaccctggacgag
aagacctctgctcggactcccatctctgaatctgggaagcaatccccctgtaacggggtg
gtgcctccttgtaccccaacccccacccaggggcagctgttttctacccctcccagcaga
cgtacactcagcatggccccctctgttcccttccagaccatgcattcggtattcaaggtg
aatgcccccttacttccgactggagactttaaatctgatattatcccctattcggactcc
ggcaacgacctgtgctatgtcaccaccagcacccagaccccaccggattttgctcccctg
gaggatgaacacctacagtcggtgaaccagtctgaatgtctggtgggtagtggtgggcag
atcttcctgtcccctagccaatcaggaggcaccatgggccgttctgaccaatcatactac
agaggatctgttagaggtattgcacgtggtggcaaggggctggtacactcctactttcgc
tcttctggtgggcacagaggaggaagcttcatcccccaggctcacctgtacggcgctcgg
gacactggctaccagcacagctacaggcgtggtggaggcaatgcaggacaaaggcacaat
aatagtggttggagtgactcctcccaggtgagcagcccagaccgggagggcaactactct
ctggtggactccgcccacggcgactcgctgcagggtgttggcatggacctcaccccccag
gtgacccctcatgccccccacaccctgatgcacgtacccatgtacccactcccccagcat
ccccagcccctccgcgtggccttcacagcagcccgcacagccaactacaccccgggcacc
ctggaccagcccatcacctttgaccagctccacagcaacctgggggaaatgttcaacacc
aacgtgggtcgtttcatctgcccagccaacggcacctacgtcttcctcttccacatcctc
aagctggcggtcaacgtgccgctatatgtcaacctgatgcgcaatgacgaggtgatggtg
tctgcgtacgccaacgacggggctccggaccacgagacggccagcaaccactccatcctg
cagctgtaccagggagaccaggtgtggctgcggctgcaccgtggctccatctatggcagc
agctggaagtacagcacattctctggcttcctgctctaccaggactga
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