Oncorhynchus mykiss (rainbow trout): 110490383
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Entry
110490383 CDS
T07259
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110490383
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
110490383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
110490383
NCBI-ProteinID:
XP_021419422
Ensembl:
ENSOMYG00000031807
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All DBs
Position
15:complement(57096165..57101944)
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AA seq
790 aa
AA seq
DB search
MYISGFPAMSLWSPKFHFPHVFNQREKIGYAAATMLGTPTSTNQGTSENSMLFEMSRISP
LLFEDTPELISSVAPDTVEGCKKNKNKKKTKALSEQGSEEPAIEHNQKEGHQSTVEKRGE
EPKHKEQTVTVVEKERKKLKKGKQEKQLNVVHGEMEVPDPEEQTGGKTKKKSKNLQTQQV
GAEGVTADEKNMNSRKNKRKHDDIEPERVIDRGLSKAAVDVSAVTAPDEARKSKKKHKNR
QTELEEGAESCRTVSRTAWISIEQQDPEIIELHTETVKSGERMVTEAEENVKEKRKQNKK
KHRESELNDCPDKADRPGIKEQTERKLKSKRPKTDGGSAAVEGSGRKKKHRRVSDKGMAS
VHSAADVLDLAVPNDNRTHDAGANGETEEGAHSVIVETGTQQHNKPCLKEETLGVDDWQA
LKDLKEFIPNIESKSVDEIQKMIKYDLDRFKEFRRQGLSLRSGRFNGQENERLRSNVYDF
LSLTGIQSGSQLFHPQRFKEEEANIKKLKRHHRFHERIGEGIPRSWHQVYIRGRKMFDGS
NYKGRFTKEELHSLKKLQTLHGNKWAKISALTGRSESSLEKRFAQMSANKGAWTEEELKR
LMEAVRKHLVGQAEPGSGPATVRKDQLYNNIPWTDVCQVVETRHWSQCRIKWFAVLKHKM
ACGQPVFSGGTQSLQGKVDLIKALNAMQIEDAADIDWEEIAYTIGDVTPRYIQTHYYRLK
VANVPMWQSMSFCEIIDFLNSRVLPNFEERLQVLINSGKMVSRNDPQELFLLSEIFDNED
SDYYSEVQNS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtacatttccggatttccggctatgtcgctttggtcgccaaagttccactttccacac
gtgttcaaccagagagagaaaataggatatgctgcagccaccatgctagggactccaaca
tccaccaatcaagggacaagtgagaattccatgttgtttgagatgtctcgaatatcccct
cttctatttgaagacactcctgaattaatctcatcagtggcacctgatacagtcgaggga
tgcaaaaaaaacaaaaacaaaaagaagactaaagcactatctgaacagggatcagaagaa
ccggcaattgagcataatcaaaaggaaggtcaccagtcgacagtagagaaaaggggtgaa
gaacctaaacataaagagcaaacagtgaccgtggtggagaaggagaggaagaaactcaaa
aaaggaaagcaagagaagcagctaaatgttgttcacggtgaaatggaggtaccagatcct
gaggaacaaactggtgggaaaacaaagaaaaagtccaagaatcttcaaacacaacaggtg
ggagcagagggagtgactgctgatgagaagaatatgaatagccggaagaataagagaaaa
catgatgacattgagccagaacgggtgatagaccgtggcctctcaaaggctgcagtagac
gtttcagctgtaactgcgccagatgaggccagaaagagtaagaagaagcacaagaacaga
caaacagaacttgaagagggagcggaaagctgtcggacagtttcaagaacagcatggatc
agcattgaacagcaggatccagaaatcatagaactgcacactgaaacagtcaagagtggt
gaacgtatggtaactgaggcagaggagaacgtaaaagagaagaggaaacaaaataagaaa
aaacacagagagagtgaactgaatgattgtccagataaagcagaccgtccaggtataaaa
gaacaaactgaaagaaaattgaagtcaaagaggccaaaaacagatggagggtctgccgct
gtggagggcagcgggagaaagaaaaaacaccgcagagtgtcagacaagggaatggccagt
gtccactctgcagcagatgttttggatttagctgttccaaatgacaacaggactcatgat
gctggagcaaacggtgagacagaggagggcgcccattcagtcattgttgagacggggacc
caacaacacaacaaaccctgcctaaaggaagaaactctaggtgtggacgactggcaggct
ctgaaggatctcaaagagttcattcccaacattgagtcaaagtcggttgacgagatccag
aagatgataaagtatgatcttgatcgattcaaggaattccgaagacaaggcctttccctg
agaagtgggagattcaatgggcaggagaacgaacgactgaggagtaacgtctacgacttc
ctgtctctcactgggattcagagtggctctcagctcttccatccacagcgcttcaaagag
gaagaagcaaatatcaagaaattgaagaggcatcacagattccatgaaagaataggtgaa
ggaatacccaggtcttggcatcaagtctatattcgtgggaggaaaatgtttgatggcagc
aactacaagggcaggttcaccaaagaagagcttcactctttgaaaaaactacagacgttg
cacggcaacaagtgggcgaagatctcggcgttgactggccgaagcgaatcgtccctagag
aaacgtttcgctcaaatgtccgcaaacaaaggcgcgtggactgaggaagaactgaaaaga
ctaatggaagctgtgcggaagcacctggtgggacaggcagagcctggcagtggaccggcc
accgtcaggaaagaccagctgtacaacaacatcccctggacagatgtgtgccaggtggtt
gaaacgcgccactggtcccagtgtcgaataaaatggtttgctgttttgaagcacaaaatg
gcatgtggacaaccagtattcagtggcggcacacaatccttacagggcaaggtggatttg
atcaaagcgttgaatgcaatgcagatagaagatgctgcagatatcgactgggaagaaatt
gcttacacaattggggatgtcacgccgcgctacattcagacacactactacaggttaaag
gtagccaacgttccgatgtggcagagcatgtccttctgtgagatcatcgacttcctcaac
agtagagttctccccaattttgaagagcgcctccaagttctgataaactcaggaaagatg
gtgtccagaaacgatcctcaagagctctttctcctctctgagatctttgataatgaggac
agcgactactacagtgaggttcagaacagttaa
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