KEGG   Oncorhynchus mykiss (rainbow trout): 110490388
Entry
110490388         CDS       T07259                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X4
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110490388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110490388
   03036 Chromosome and associated proteins [BR:omy03036]
    110490388
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110490388
   Coactivators
    SAGA/TFTC/STAGA complex
     110490388
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110490388
    STAGA complex
     110490388
    TFTC complex
     110490388
    SAGA complex
     110490388
    SLIK complex
     110490388
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10
Other DBs
NCBI-GeneID: 110490388
NCBI-ProteinID: XP_021419437
Ensembl: ENSOMYG00000004391
LinkDB
Position
2:44464974..44472924
AA seq 193 aa
MFHGPYDDSADPERGPTVWQIMTQCHPLSNHSNFFTVKAEASSTLPLATSMANCNTAAVP
GKVMGTPGPAGRISPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVT
AACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPYKKACTTEAHKQVLCVICQ
LHHHTSILIFSPF
NT seq 582 nt   +upstreamnt  +downstreamnt
atgtttcacggtccttacgacgacagtgcagacccagagagaggccccaccgtctggcag
attatgacccagtgccacccactgtccaaccactccaacttcttcaccgtgaaagccgag
gcctcctcaacactacctctcgccaccagcatggccaattgcaacaccgccgccgttcca
gggaaggtgatgggcacacctggccctgccggcagaatcagcccagaaggaagtcaggtg
ttgagtaaaaagaagctgcaggacctcgtaagagagattgaccccaatgagcagctcgat
gaggatgtggaggagatgctgctacagattgcagatgacttcattgacagtgtggtgacg
gctgcctgtcagctggcccgccatcgcaaatccaacaccttagaagtgaaggacgtccag
ctacacctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcgg
ccgtataagaaggcttgtaccacagaggcccacaaacaggttttgtgtgtgatttgtcag
ctccatcatcacacaagtattttgatcttcagtccgttttaa

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