Oncorhynchus mykiss (rainbow trout): 110490389
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Entry
110490389 CDS
T07259
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110490389 (cbll1)
04131 Membrane trafficking [BR:
omy04131
]
110490389 (cbll1)
04121 Ubiquitin system [BR:
omy04121
]
110490389 (cbll1)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110490389 (cbll1)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
110490389 (cbll1)
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110490389 (cbll1)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110490389 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-RING_5
P53_TAD
zf-C3HC4_3
DZR
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110490389
NCBI-ProteinID:
XP_021419435
Ensembl:
ENSOMYG00000033978
UniProt:
A0A8C7T1I8
LinkDB
All DBs
Position
15:57253442..57258150
Genome browser
AA seq
487 aa
AA seq
DB search
MDQIDNDLQGTDGSGSLGGPDVRRRIPIKLISKPTIRSKPAPRTQRPMGRQPSKPQAGDE
ESFSFKQEERFDCGTKAGDVFSSQRKFPQQMFWDFKLNLIGEKDDIPAHFCDKCGLPIRI
YGRMIPCKHVFCYECALLHEKKGDKMCPGMQLFSCTDPVQRIEQCLRGSLYMCSIVKGCK
RTYLSQRDLQAHINHRHMRAAKALASRQDALHLPPSTEVPDRFRVPPPHLPKTQGHLPPP
LQHGGHDPYGQPPPASHDAPPLSQETFRIATVTTRARSNLITVPIQDDSASSSTSSSRDP
LPPGPGPAPPPHHHPGDYPGQPVVSHPHHMMAPPQQHYGPPPPPPPPINHPMQHPPQGSG
TPHMVYNQAGPPPPMSNAPPPITPPPGHIMGQMPPYMNHPPPGPPPQHGGPPVNAPPPHH
YNPNSMQQFPEDQGTLSPPFNQQGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQS
RYRPYYQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaattgacaatgacctgcaaggcacggacggctcggggagtcttgggggccct
gatgtccgcagacgcatccccatcaaactcatctccaaaccaaccatcaggagcaaacct
gctccccggacacaaagacccatgggcaggcagccctccaaaccccaggccggggatgaa
gagagttttagcttcaagcaagaggagaggtttgactgtggtaccaaggcgggggatgtg
ttttcaagtcaacggaagttcccccaacaaatgttttgggactttaagttgaatttgata
ggtgaaaaggatgacattccagcacacttttgtgacaagtgtggtctgcccataaggatc
tatggacgcatgattccatgcaaacatgtattctgttatgagtgtgcgttgctccacgag
aagaagggagacaagatgtgcccaggtatgcagctcttcagctgcacagacccggtccag
cgcatcgaacagtgtctgcgtggctccctctacatgtgcagcattgtgaagggctgcaag
cgcacctacctttcccagcgtgacctgcaagcccacatcaaccaccgccacatgagggca
gccaaggctttggcaagccgccaggacgccctgcaccttcccccatccacagaggttcct
gaccgcttccgcgtgcccccgcctcacctgcccaagacccaagggcacctcccgccccct
ctccaacacgggggtcatgacccctacggtcagccaccaccggcttcccatgatgcacca
cctctttcccaggagaccttccgcattgccaccgtaactacacgcgcacgcagcaacctc
atcaccgtgccaatccaggatgactccgcttcttcctccacctcttcctcccgtgaccct
ctccctcctggcccgggccctgctccacccccacaccaccatcctggggactaccctggt
cagcctgtagtgtcccatccccaccacatgatggcaccacctcaacagcactacggccct
ccacctcctccccctccacccatcaaccaccccatgcagcacccgccccagggctctggg
acaccccacatggtgtacaaccaggccggccctcccccgcctatgtccaacgcaccccct
cccattacccccccgccaggacacatcatgggtcagatgcccccctacatgaaccaccct
cctccaggccccccacctcaacacggtggtcctccagtcaacgccccccctccccaccac
tataaccctaactccatgcagcaattccctgaggaccagggcacactcagtccccctttt
aaccagcaagggggtctgagccctgggatgtggcctgcccctagagggcctcctcctcca
aggatgcagggccccccacctcagggccagatgcctggaccccatcaccccgatcagtct
cgctaccgcccttattatcagtaa
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integrated database retrieval system
