Oncorhynchus mykiss (rainbow trout): 110490436
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Entry
110490436 CDS
T07259
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110490436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110490436
03041 Spliceosome [BR:
omy03041
]
110490436
03032 DNA replication proteins [BR:
omy03032
]
110490436
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
110490436
Spliceosome [BR:
omy03041
]
Complex A
U1 snRNP components
Sm proteins
110490436
U2 snRNP components
110490436
Complex B
U1 snRNP components
110490436
U4/U6.U5 tri-snRNP components
110490436
Complex C
U2 snRNP components
110490436
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110490436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110490436
NCBI-ProteinID:
XP_021419500
Ensembl:
ENSOMYG00000042368
LinkDB
All DBs
Position
15:complement(58389519..58391339)
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDSYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLYIRGVEEEEEDGEMKE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacctctgaaccctaaacccttcctgaatggcctgacaggcaagccggtgatg
gtgaagctgaagtgggggatggagtacaagggctacctagtgtctgtggacagctacatg
aacatgcagttggcgaacacagaagagtatgtagatggagcgttggctggtcaccttgga
gaagtacttgttaggtgcaataatgttttatatattagaggagtggaggaagaagaggag
gacggagaaatgaaagagtga
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integrated database retrieval system
