Oncorhynchus mykiss (rainbow trout): 110490494
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Entry
110490494 CDS
T07259
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1 isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
omy04814
Motor proteins
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110490494
09142 Cell motility
04814 Motor proteins
110490494
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110490494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110490494
03036 Chromosome and associated proteins [BR:
omy03036
]
110490494
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110490494
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
110490494
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
110490494
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
110490494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
ABC_tran
nSTAND3
PduV-EutP
AAA_16
RsgA_GTPase
AAA_29
AAA_22
AAA_7
AAA_23
DEAD
ATPase
TsaE
SRP54
AAA_14
ResIII
Sigma54_activat
nSTAND_NTPase5
NACHT
Zeta_toxin
AAA_25
FtsK_SpoIIIE
GTP_EFTU
IIGP
Roc
Motif
Other DBs
NCBI-GeneID:
110490494
NCBI-ProteinID:
XP_036817918
LinkDB
All DBs
Position
2:complement(14386733..14398249)
Genome browser
AA seq
484 aa
AA seq
DB search
MASTVRITSTANTLNSIENQTSDEDGQNLWSSILSEVSTRSRSKLPSGKNVLIMGETGAG
KTTLIAKLQGVEEYMKGRGLEYLYFNVHDDDIDDHAMCNAWILDGDLYHKGLQKFAVCGE
NMADTMALLVVDMSRPWTVLDSLQKWASVLREHIDKLRVNPETLRDMEQRLVRQFQEYTE
PGGDHSASPKRRNPVAGEAEEECVVLPLGENTLTHNLGMPVMVVCTKVSILFPSLHFPPL
QCDTFLSLEKEHDYREEHFDFIQSHIRHFCLQYGAALLYTSMKENKNLDLLYKYLVHRLY
GFPFDMLAQVVDKDSVFIPSGWDNEKKVAILYENFQSLKREDKFEEVIVQPPVRKFVHEK
ELGAEDDQVFLLKLQTLLSKQPPAAAGRPVDTTNRAPTGSPRVSNRSATANVANVMPMQP
GGQTSEGVLANFFNSLLSKKTGEGGGANNTPRTVRKSASKVGLDGEPEASSPTSSSPPAN
MEES
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacagtgagaattacgtcaactgcaaatacactaaattctatagaaaatcaa
accagcgacgaggatggccagaatttatggtcctctattttgagtgaggtatcgacgcgt
tcacggtcaaaattgccgtctgggaaaaatgttcttattatgggtgagacgggggcaggg
aagaccactctcatagccaaactgcagggagttgaagaatacatgaaaggcagaggactg
gagtacctgtactttaacgttcacgatgatgacatcgatgatcatgctatgtgtaacgca
tggattctggacggtgacctgtaccacaaaggcctccagaagtttgctgtgtgtggggag
aacatggccgacactatggccctgctggtagtggacatgtccaggccgtggacggtgctg
gactctctgcagaagtgggccagtgtgctacgagaacacatcgacaagctcagagtcaac
ccagagacactgagggacatggaacagagattggtccgacagttccaggagtacacagaa
ccagggggtgaccacagcgcctctcccaagaggaggaaccccgtggctggggaggctgag
gaggagtgtgtggtgctccccttgggagagaacacactcacacacaacctgggcatgcct
gttatggtggtgtgtacaaaggtaagtattctctttccctctcttcacttccctcctttg
cagtgtgacacgtttctcagtctagagaaagagcatgactaccgggaagaacactttgac
ttcatccagtctcacatccgacacttctgcttgcagtatggcgcagcgctgctatacacg
tcaatgaaggaaaacaaaaacctagacctattgtataaatacctggtccatagattatac
gggtttccctttgacatgctggcccaggtggtggacaaagactcagtattcatcccatca
ggatgggataatgaaaaaaaggttgccattttatatgaaaactttcagtcgttgaaaagg
gaagacaagtttgaggaggttatcgtccagcctcctgttagaaagtttgtacatgaaaag
gaactaggtgcggaggatgaccaagtgtttctgctaaagcttcagaccctgttgtctaag
cagcccccagcggcagcaggcagaccagtggacaccacaaacagagcacccactggctct
ccacgggtgtcaaatcgctcggcaacagcaaacgtggccaatgtgatgcccatgcaacca
ggcgggcagaccagcgagggcgtgctggctaacttcttcaacagtctgttgagcaagaag
accggggaagggggtggggccaacaacacgcccagaacagtccggaagtcagcatcaaag
gtgggacttgacggtgagccagaggcgtcctccccgacctcatcctcacccccagccaac
atggaggagtcctga
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