Oncorhynchus mykiss (rainbow trout): 110490508
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Entry
110490508 CDS
T07259
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110490508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110490508
03021 Transcription machinery [BR:
omy03021
]
110490508
03036 Chromosome and associated proteins [BR:
omy03036
]
110490508
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
ARID
110490508
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110490508
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
110490508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
110490508
NCBI-ProteinID:
XP_021419606
Ensembl:
ENSOMYG00000014886
UniProt:
A0A8C7Q559
LinkDB
All DBs
Position
15:61254071..61277995
Genome browser
AA seq
1656 aa
AA seq
DB search
MANSTGKNVLDQRRKGLAFLDELRQFHRSRGSPFKKIPIVGGKELDLNALYIRVISLGGF
AKVSDKNQWSELGEDFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKP
SLPIGAIPCSYNYQQHTVSDYLRQSYGLSMEFTAPCDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKDPKLITLLLAHAGVFDDSLGSFSSVFGMDWKEQTSRDFMKFWKDV
VEDSEVWDLIWDKTSLTQVTDTTLGDERWGALFHPPRNLGISDIEGQRVLQVGVILRNLS
FEEANVKLLAANRTCLRFLLLCAHCHFISLRQLGLDTLGNVAAELQLDPVDFRTTHLMFH
TITKCLMSRDRFLKMRAMEILGNLSKAEDNSVLICEYVDQESYREVISLLSLPDLMLLMS
SLEVLYLLAQLGEIPCSKIASVDRSIDLLVRLVSVDLHTFGPDALTAVRLMEHQAAGQSQ
VAEVRPQLVEQLPAPLQGAPIPAARVPVQSTPPPPGIVELDGEKFTVQWLNAHFEVSGES
SVLRSEMYSEYLTTCSKMGRAGILASQGFLKCLRTIFPNHTVKRLEDTKPNAQAHIHVVG
VKRRAIPLPIQLYYQQQASPTPGPRHDVPVDPQASPSVPSLTANPAAPQVASNMQDGVPH
PQVAQTVPRLPLHPQASPHHHPAQQAKPGDILKTAMVQSSIPTSGQVVQNHSPSMTQQLH
HQQVMAPTGTPVTLFQQVQQGHIFTARVQGVPIAQRPPLPHTPSSVPQALSQGPQQETAV
FSSPPHYAAVSAPCSSLQNFQVGGGQVFTIAGVSNTQGSRVTFQNIAPKPAPSQASGPPT
ASHNQQQQSSVVIVSPNLQQNQAYAPAIHQIVLANPSTMSGGQAIQLAGQPPAPSKPPPC
PSTIAPLPQGLPTPSNTQIPMQGSASVSQMLSVKRQPQQLNPQQQFHPQQQFQIQSQPLP
QQQQPPQPTSTESSLIKQLLLPKRPSTPGGKLILPAPQVPPPSSTQRAPSPQVLYQLASQ
GQPQPQQLNVQLVPSQLQSPGGPLQTVQLISTSSPATIIQGQAPGGQVTFTVVPNTGFTT
SASAAAAQVSQGAAAPGLPAVQTGNTLHGPPLPFRGDKIICQKEEEAKDATGLHIHERKI
EVMENSSLADGAGTKTSNGDLAGADAPGAKLLNGRKCMDSSLPPYHSGNSQGACANGPAS
ESCPTNGKQTSGLANPQEGHVDPKKALVNGVCDFERGDASTGAHLSKNIPNHFASKHLGN
GEVGPPQKLHGAPQEPSVPQQDTAKAEQAERLANGPQATGPFSNGPMGPGPNYALPAFRQ
QLFPTVTVNSQGATGPGTLPANGLSGESRAHKRPAEEDKGASVIPCKVGVRIITISDPNK
AGCSATMVAVPAGADPSTVAKVAIENATQQRNCSTIQASSSTPLPTVAQPVQGGSASPNA
SLSGPQAVVAPPEQTRKAGQNFKCLWQSCKRWFETPSRVFYHAATQHGGKELYPGQCLWE
GCEPFPRQRLSFITHLQDKHCSRDALLAALKLEQEPTQTQDPNQKTSKPQPVASSTPAPR
AQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPMTKHIRLTAALTLKNIAKYSDCGRK
LVKRHESHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatgtactagatcagcgaaggaagggactggctttcctg
gacgagctgcggcaatttcaccgaagcagaggatcgccgttcaagaagattcctatcgtg
ggtgggaaagaactagatcttaatgctctctatatcagagtcatttcgttaggtggattt
gctaaggtttctgacaagaatcagtggtcagagctgggtgaagattttaacttcccaagg
agttgttcaaatgcagcatttgttttaaaacagtactaccttcgatatttagaaaagtat
gaaaaggtccatcacttcggcgaggatgatgacgaggtgcagcctgggaacccgaaacca
tctcttccaatcggtgcaattccctgctcctataactaccagcaacacactgtatcagac
tatctccgccaaagctatggactgtccatggagttcacggccccttgcgactataacaaa
ctggtgctctctctcctgtcgggcttgcccaatgaagtggacttcgcaatcaacgtttgc
actctcctctccaacgagagcaagcatgccatgcagctggagaaagaccccaaactcatc
acgctgctactggcacatgcaggtgtcttcgatgactcactaggcagcttctcctctgta
tttgggatggactggaaggagcaaacctcccgggacttcatgaagttctggaaggatgtg
gtagaggattctgaagtctgggacctcatctgggacaagaccagcctgacacaagtgaca
gacactacgctgggggacgagcgctggggcgccctcttccacccgccacgcaacctaggc
atcagcgacatcgagggtcagcgggtcctgcaggtgggagtcatcctccgcaacctctcc
ttcgaggaggccaacgtcaaactgcttgctgctaaccgcacctgtctgcggttcctctta
ctgtgcgcccactgccacttcatctccctacggcagctgggattggatacactcggcaac
gtggccgcagagcttcagttagatcctgttgactttcgaacaacccacctaatgtttcac
accatcaccaaatgcttgatgtcaagggacaggttcctgaagatgagggccatggagatc
ctgggtaatctgagcaaggcggaggacaacagtgtgctgatctgtgagtacgtggaccag
gagtcataccgtgaggtgatcagcctgctgtcgctgcctgacctcatgctcctcatgtcc
tccctggaggtcctctacctgctggcccagctgggggagatcccctgcagcaagatcgcc
tccgtggacaggagcatagatctgctggtacggctggtgtcagtggacctgcacacgttt
ggtccggatgctctgacggccgtgaggctgatggagcaccaggctgctgggcagagccag
gtggccgaggtgcggccacagcttgtagaacagctgcctgctccgctgcagggcgcaccc
atcccagcagcaagagtccctgtccagtccactccccctcctcctggtattgttgagcta
gatggggagaagtttacagtgcagtggctaaacgcccacttcgaggtgagcggcgagagc
tccgtgttgcgctcagagatgtactcggagtacctcaccacatgcagcaagatgggacgc
gctggcatcctggcctcccaaggcttcctcaaatgtctacggacaatcttcccaaaccac
acagtgaagcggctggaggacaccaagcccaatgctcaggcacacatacacgtggtgggg
gtcaaacggagggccatcccactgcccatccagctgtactaccagcagcaggctagcccc
acaccagggcccaggcacgacgtccctgtcgacccccaggcatccccgtcagtccccagc
cttactgctaacccggcagcgccacaggtggcatccaacatgcaggatggtgtacctcac
ccccaagtggctcagactgttcctcggctcccccttcacccccaggcctcaccgcatcac
caccctgctcagcaggccaagccaggggatatcctcaagacggccatggtccagagctcc
atccccacctctggccaggtggtccagaaccacagccccagcatgacccaacagctccac
catcaacaagtcatggcgcctaccgggacccccgtcacactgttccaacaggtacagcag
ggccacatcttcacggcgcgggttcagggggtgcccatcgcgcaacggccgcccctgcca
cacactccctcctcagtaccccaggccctctcccagggcccccagcaggagacggctgta
ttctcttcccccccacactacgctgctgtgtcggccccctgctcctcgctgcaaaacttc
caggtgggcgggggccaggtgttcaccattgccggcgtgtccaacacccagggctcccgc
gtcactttccagaacatcgcccccaagcctgcaccctcgcaggccagtggaccaccaaca
gccagtcataaccagcagcagcagtccagcgttgtcatcgtcagccccaacctccagcag
aaccaggcctatgccccggctatccatcagattgttctggccaacccctccaccatgtct
ggtggccaggccatccaactggcaggacagcctcccgctccttccaaacccccaccttgc
ccttccaccatcgctccactgccccagggcctgcccactccttccaacacccagatccca
atgcagggctctgcttctgtcagtcagatgctgtcggtcaaacggcaaccacaacaattg
aacccccagcagcagtttcacccccagcagcagtttcagattcagtcccaacccctgcct
cagcagcagcagcccccccagcctacctccacagagtccagcctgatcaaacagttactg
cttccaaagcggccctccacgccgggcggaaagctcattctgcccgcgccccaggtgcct
ccccctagcagcacgcagcgtgccccaagcccacaggtgctctaccagttggcctcacag
ggccagcctcagccccagcagctcaatgtacagctggtccccagccagctccagtcccca
ggggggcctctccagacggtgcagctcatctccaccagcagccccgccaccatcatccag
ggccaggctcctggtggccaggtcaccttcactgtggtgcccaacacaggcttcaccact
tcagcctctgcagctgccgcccaggtcagccaaggagccgctgcaccaggcctgccagcg
gtccagacaggcaacaccctccacgggccaccgctgcccttcaggggggacaagataatc
tgccagaaggaggaggaggccaaggacgccacgggtctgcacatccacgaacgcaagatc
gaggtgatggagaactcctctctggccgatggggctggcaccaaaaccagcaacggggac
ctggcaggggctgatgctccaggggccaagctgcttaacgggaggaagtgcatggactcc
agtctacctccataccactcagggaacagccagggggcctgtgccaacggaccagccagc
gagagctgccctaccaacgggaagcagacctctggcctggctaacccacaggagggccat
gtcgaccccaaaaaggctctcgtcaacggggtctgtgactttgagagaggggacgcctcc
acaggtgcccacttaagcaaaaacattccaaatcatttcgcttccaaacacttggggaac
ggggaggtgggtcctcctcagaaactgcatggggctccccaggagccctctgtcccccag
caggatactgccaaagctgagcaggcagagcgccttgccaatgggcctcaggcaacaggc
cccttctctaacggacctatggggccggggcctaactacgcactgcctgcattcaggcag
cagctgtttcccaccgtcactgtaaactcccagggcgccacggggccagggaccctgccg
gccaatggtttgagcggtgagagccgtgcgcacaagaggccggcggaggaggacaagggg
gcgtctgtgattccctgtaaggtgggagtgaggatcatcaccatcagcgaccccaacaag
gcgggctgcagtgccaccatggtggccgtgcctgctggagccgacccaagcacagtagcc
aaagtagcaatagagaatgccacgcagcagaggaactgctccaccatacaggcatctagc
tctacgcctctgccaacagtggctcagcctgtgcagggtggcagcgccagccccaacgcc
tccctttctgggccacaagccgtggtggcacccccagaacagaccaggaaagcgggacag
aacttcaagtgtctttggcagtcctgtaaacggtggtttgagacgccgtctagagtgttc
taccatgcagccacgcagcatggtggcaaggagctatacccaggccagtgcctctgggag
ggatgtgaacctttcccacgacagagactgtccttcataacccatctacaggataagcac
tgttctcgagatgccctattggccgcactaaaactggagcaggaaccgacacagacgcaa
gacccaaatcagaaaacttccaagcctcagccagtggcaagcagcactccagccccccga
gcacagaaagctattgtcaatcatccgagcgcagcccttatggccctacgcagaggctct
cggaacctggtgttcagggacttcactgatgaaaaagagggaccaatgaccaaacacata
agactaactgctgccttaacgctaaagaacattgccaagtattcagactgcggtcgaaag
ttggtgaagaggcatgagagccacctctctgtgctggcactcagtaacatggaggtctcc
acaacgctcgccaaatgcctttacgaactgactcgctctctccaagcttga
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