KEGG   Oncorhynchus mykiss (rainbow trout): 110490527
Entry
110490527         CDS       T07259                                 
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
  KO
K14791  periodic tryptophan protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:omy03009]
    110490527
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    110490527
  Pre-60S particles
   Other pre-60S particles
    110490527
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_EML_2 WDR55 WD40_RFWD3 Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR41 WD_LRWD1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 110490527
NCBI-ProteinID: XP_021419637
Ensembl: ENSOMYG00000032589
LinkDB
Position
15:complement(61726204..61731947)
AA seq 493 aa
MSSQITCVGWVKRGVSKETPDKVELSKEELQRIIAEAKEQLGERVGEEEEEDDDEGMASG
QEQSEEAEGVQGQEPEQDENEAGREEADELAEYGLDRYDEEDSVTANLGNSLAGLTVFST
NEEDPYITIKDTDQYEREDFQIKPNDNLVISGRAEKDCCNLEIHVYNSEEESLYVHHDIL
LPAYPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKKKS
KKAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADKTVILWDLAQGKPATTLCRHTDKVQT
LMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLASTED
GFVYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKPKLVH
TRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAEVFGNRERLVATTAPEA
SSSTSSTADMELS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagttctcagatcacttgtgttggatgggtaaagcgaggcgtttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacgcattatagcagaggcaaaagaacaa
ttgggtgaacgcgtaggtgaagaggaggaggaggatgatgatgaaggcatggccagcggg
caggaacagagtgaagaggcagaaggtgttcagggacaggagccagagcaagatgaaaat
gaagcaggaagggaggaagctgatgaactagcagagtatggtttggatagatatgacgag
gaagactctgtgactgccaaccttggtaacagccttgccggcctcacagtgttcagcacc
aatgaggaggatccttacattaccatcaaagacacagaccagtatgagcgagaggacttt
caaatcaagcccaatgataacctcgtaatttcaggcagagcagagaaggactgctgcaac
ctggagattcacgtatacaactccgaggaggaatccctctatgttcaccatgacatactc
ctgccagcctatccactgtgtgtggagtggcttaactttgaccctagtccagaaggcaca
ggcaattatgcggctgtaggcaacatgacaccgcagattgacgtgtgggacctggatgtg
gtggactgcctagagcctgccttcactctggggagcaagaaggcctccaaaaagaaaagc
aaaaaggctgcagcagagccagtggaaggtcatacagacgctgtactcgacttatcctgg
aacaagctggtccgcaacgtcttggccagtgggtcagccgacaaaacagtgatcctgtgg
gatctggcacagggaaagccggccacaacactgtgcagacacactgacaaggttcagacg
ttgatgttccacccctttgaagctcagaccctgatatcaggatcatacgataagtcggca
atcctgtatgactgccgcagcccggacagcagccatcgcacttggaggtttagcgggcag
gtggaaagggtcgcctggaaccacttctcgccctgcaacttcctggcgagcacagaggac
ggctttgtttactgtctggacgcacgctcggacaagccagtgtttacactaagggcacat
gacggagaggtgtcaggcttggaccttagcagccagatccggggatgcttggtcacctcg
tcagcagacaaacacgtcaagatttgggacatcttggggaacaagcccaaactggttcac
acccgggacatgaaaatgggggtgctgttctgtgcagcgtgctgtcctgacatgcccttt
gtatatgcctttggaggacagagggatggcctgcgggtttgggacataagtgatgtggca
gcagtcgctgaggtgtttggcaatcgggagcggttggtggcaaccacagcgcctgaggca
tccagcagcacttcctccacagcagatatggagctttcctag

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