Oncorhynchus mykiss (rainbow trout): 110490574
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Entry
110490574 CDS
T07259
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K08127
epiphycan
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omy00535
]
110490574
Proteoglycans [BR:
omy00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
110490574
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Paralog
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
110490574
NCBI-ProteinID:
XP_021419678
Ensembl:
ENSOMYG00000034911
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Position
15:complement(62850140..62872750)
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AA seq
585 aa
AA seq
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MRMLEGLILGLFVLNAVVANPRFARQVELDMYDSANYDVDLENLNLENPDVHGYEDGLTI
DEPQIEIGTLAPPNYNYPGPGGPASLEEEEEEEELPLRPQLIPQGSGGSGVLMGPDTQGE
EELRLSPIDILHISGDFGGSTGSGGSGGSGVSGGSGGSGDLLASGSGDLLASGGSGGSME
IGSAGSGGSGYLGSGGSVGSGDLGSGGSVGSGDLGSGDSVGSGDLGFGGSGGSGDLGSGG
SGGSGDLGSLGSGGSSTLLGSGGSGDILVSSTGGSGGSGGSGDSGIIIISGEEELPLIPD
TTPQEASGVSGESGAFGTSGVSGPGGSDSGGSEVTLIPDPEEEEEVLLTTPKTPQESGGT
VGSGGSGLPEVDLDIKGMPTCLLCTCLGGSVYCDDVKLTSVPPLPKETTHFYARYNRITK
INKGDFAQMNKLKRIDLTANEIASIADDAFSGLPVLEELVLRENGVSQLPALPPVMTLID
ASHNNIGATGIHKEAFKDMTGLLYLYLTDNHIDHIPVPLPDSLRSLHLQRNNIQMIHEDT
FCNLKDFNYIRNALEDIRLDGNPINLSRTPQAYVCLPRVPIGAHI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgttggaggggctcatattaggactcttcgtcctcaacgcagtggtggccaac
cccagatttgcccggcaggtggaattagacatgtacgacagcgctaactatgatgtggat
ctagaaaacttgaatttggagaatccggatgtccatggttatgaagatggactgactatt
gacgaacctcagatagagattggcacactggccccaccaaattataactaccctggtcct
gggggccctgcatcactggaggaggaagaggaggaggaggagttgcccctaagaccccag
ctcatcccccaaggctcaggggggtctggggtactcatgggcccagacacacagggagag
gaggagctgcgcctgagtcctattgacattcttcatatctccggggactttgggggttcc
acgggttctgggggttccggtggctctggggtttccggaggttctgggggttccggagac
cttttggcttccggttctggggaccttttggcttctggaggctcagggggttccatggaa
attggttcagcaggttctgggggttccgggtaccttggatccggaggctctgtgggttcc
ggggaccttggatccggaggctctgtgggttccggggaccttggatccggagactctgtg
gggtccggggaccttggttttggaggctctgggggttctggggaccttggttctggaggc
tctgggggttccggggatcttggttccctgggctctggaggttccagcaccctcctaggc
tcagggggttccggggacatattggtttccagtactgggggttccggaggttctggaggt
tccggggactcaggaataataattatatctggagaggaggagctgcccctcattcctgac
actaccccccaggaggcatcgggtgtttctggggagtccggggcctttggcacctcaggg
gtctcagggcctgggggctccgactctggtgggtcagaggtcacattaatccctgaccct
gaagaagaggaggaagtgctcctgactactccgaaaacccctcaggagtctggaggtaca
gtaggctcagggggctctgggttgccagaggttgacttggacattaaaggtatgcctact
tgcctgctgtgcacctgtctgggtggttctgtctactgtgatgatgtgaagctgacgagc
gtgccgcctctccccaaagagaccactcacttctacgcccgctacaaccgcatcaccaag
atcaacaagggcgacttcgctcagatgaacaagctgaagaggatcgacttgaccgccaac
gagattgcatccatcgccgatgatgcgttctccggcctgcccgtgctggaggagctggtg
ctccgtgagaacggcgtgtcacagcttcctgcccttccgcccgtgatgaccctcatcgac
gccagccacaacaacattggcgccacaggcatccacaaagaggctttcaaggacatgacg
ggtctgctgtacctgtacctaacagacaaccacatcgaccacatccctgtgcccctaccg
gacagcctgcgctctctgcacctacagcgcaacaacattcagatgatacacgaggacacg
ttctgcaacctgaaagacttcaactacatcaggaacgcactggaggacattcgcctggac
ggcaaccccatcaacctcagcaggaccccacaggcctatgtgtgtctgccccgcgtcccc
atcggagcccacatctaa
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