Oncorhynchus mykiss (rainbow trout): 110490622
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Entry
110490622 CDS
T07259
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110490622
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
110490622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
110490622
NCBI-ProteinID:
XP_036801157
LinkDB
All DBs
Position
15:complement(72271178..72281002)
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AA seq
786 aa
AA seq
DB search
MAAPSAEQQNGQSDESDLQSPISTNYEDSETESGEGALPDYVVELIEKEIGVDLKSLKKV
SALLEKLTAENKLLEEQVLTVSSSVPLRVSAALSAAEESRVSLEGLLQRERVLSNTLIQH
LQGAQPWADSLGRTLEQLDNTEKHMKYLQCLSRIEELSDSIQQCLITNSIWEAVVAVGSM
ASLDVGLKQSGCSHLQAFLRETLCFWHKIIKDRLAGDFEELLIQLHWPFISPPTQSLSPP
ANAQELHSQLELLVAQLLSLQTSDDLISEKPTSVSRVGLPPTTPLSLPVQIMLLPLSKRF
RYHFTGNRQTNSLNKPEWFLTQVLMWMGNSSNFMEEKIQPILDRNGANVNAKVELCRGLL
TLAQEKLALDAPRLLYDDALFCHLVDEILQFERELRTTHSYPSTLPGVLHVLLEEVVLQK
WLTVERKMAIEKVDAMLSAEGAWSSQYKDISDMDELKAPDCAETFMTLLLVITDRYRALP
CPRAQLRFLALQRELVDDFRIRLTQVMKEESRNPLGARYCAILNAANYISTVLGDWGDNV
FFLQLQQSAVALGEEELLGPLGVTESGRLASLEGSLFEGLLGLLERLRGDMLGRLLEAVM
RDVQKKAQPYCRDRWLSLPSQCDQATMSLSSLACPLMLCLRDHLLQLQQMLCLPLFQTGW
QDLAERLDLFLYQNVILYNHFNEGGAAQLQFDMTRNLFPLFGHYCKRPENFFKHVKEACV
ILCLNVGSALLLRDVLRQAEEDEEQPGTPDGKQPSPTSALNELGVYRLAPCDVLILLNLR
ASWPGK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctctgcagagcagcaaaacggccaaagtgatgaatctgatctacaaagc
cctatatcgacaaattatgaagactccgaaacagaatcgggggagggagcactccccgac
tacgttgtcgaattgatagagaaagaaatcggagtggatctgaagtcgctgaagaaagtt
agcgcgctcctggagaaactgacagcggaaaacaagttgctggaggagcaggttctgacg
gtgtccagttcggtgccgctgcgggtgtcagcagcgctgtctgctgccgaggagtcccgt
gtgtctctggaaggtttgctccagcgggagagggtcctgtccaacaccctgatacagcac
ctgcagggcgcccagccctgggcagacagcctgggacggaccctggaacagctggacaac
acagagaaacacatgaaatacctgcagtgtctgtcacgcattgaagaactcagtgacagc
atccagcagtgtctgatcaccaacagtatatgggaggcagtggtggcggtgggcagcatg
gccagtctagatgtgggcctaaagcagtctggctgctctcatctccaggccttcctcaga
gagacactatgcttctggcacaagatcattaaggacagactggctggtgattttgaggag
ttgctgatccagcttcactggccgttcatctctcctcccacccagtctctctccccccct
gccaacgctcaggagctccacagccagctggagcttctggtggcccagctcctgtctcta
cagacctctgatgatctcatatcagagaagccaacctctgtgtcccgtgtagggttgccc
ccgacgacacccctgtctcttcctgtccagatcatgttgcttcctctgagcaagaggttt
cgataccacttcactggaaaccgtcagaccaattcactcaacaagcctgagtggttcctg
acccaggtcctgatgtggatgggtaacagctccaacttcatggaggagaagatccagccc
attctggacagaaatggagctaacgtcaacgccaaggtggagctgtgtcgcggtctactc
accctggcccaggagaagctagcgttggatgctccacggctgctctacgacgacgctctc
ttctgccacctggtggatgagatcctgcagtttgagagggagctgcgcaccacccactcc
taccccagcaccctgcccggagtgctgcatgtactgctggaggaggtcgtgctgcagaag
tggctcactgtggagaggaagatggcgatagagaaggtggatgccatgctgtctgctgag
ggggcttggagctcccagtacaaagacatcagtgacatggatgaactcaaggctccagac
tgcgctgagaccttcatgaccttactgctggtcatcactgaccgctaccgtgccctcccc
tgccctcgtgcccagctgcgtttcctggcgctacagagagagctggtggacgacttccgt
atccgcctcacccaggtgatgaaggaagagtcccgtaacccgctgggcgctagatactgt
gctattctcaacgctgccaactacatctccaccgtgctgggggactggggagacaacgtg
ttcttcctgcagctgcagcagtcagctgtggccctgggggaggaggagctgttggggccg
ctgggggtcactgagtccggccgtctggcctctctggaggggtctctgtttgaggggctc
ctggggctgctggagaggctgagaggagacatgctgggcaggttactggaggctgtcatg
agggacgtacagaagaaggctcagccctactgcagggacaggtggttgtctctgccgtcc
cagtgtgaccaggccaccatgtccctgtccagtttagcctgtcctctgatgctctgtctc
agggaccacctgctccagctgcagcagatgctgtgtctgcctctcttccagacgggctgg
caggacctggctgagaggctggacctcttcctctaccagaatgtgattctgtataaccac
ttcaacgaggggggtgcagcccagctccaattcgacatgacaaggaacctcttccctctg
tttggacactactgcaagaggcctgagaacttcttcaaacatgtgaaggaggcctgcgtc
atcctgtgtctgaatgtgggctcagctcttcttctacgagacgtcctaaggcaggctgag
gaagacgaggagcaaccagggaccccggacggcaagcagcccagccctacgtcagccctc
aacgagctgggggtctaccgtctggccccctgcgacgtcctcatcctgctcaacctcagg
gcctcctggccgggaaagtga
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