Oncorhynchus mykiss (rainbow trout): 110490648
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Entry
110490648 CDS
T07259
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110490648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110490648
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
110490648
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
110490648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
110490648
NCBI-ProteinID:
XP_036812868
Ensembl:
ENSOMYG00000010983
LinkDB
All DBs
Position
21:complement(13066861..13069913)
Genome browser
AA seq
312 aa
AA seq
DB search
MSKRAKKNEQEAGDGDHDNGTAPAAKKGKKVKEPEAPILYSDPPDKMNSKDGRAANMKIT
SWNVDGLRAWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAGSDEK
EGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYR
KTWDVEFKAYLSDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFNQLLA
AGFTDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIRNQAMG
SDHCPITLHMVV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagagcgaagaaaaatgagcaggaggctggagatggtgaccatgacaacggc
acagctcccgctgccaagaaaggaaagaaggtcaaggaaccagaggctcccattctgtac
agtgaccctcctgataagatgaacagcaaagatggacgtgctgctaacatgaagatcacc
tcctggaatgtggatgggctcagagcttgggtcaagaagaagggccttgattgggtgcgt
gacgaggccccagatgtgctgtgcctgcaggagacgaagtgcgctgagaagtcccttcct
gatgaaatcacctccatgcctgagttcccccacaagtactgggctggctctgatgagaag
gagggctatagcggggtagctatgctgtgcaagactgagcccctcaaagttacctatggc
ataggtaaagaggagcatgataaggagggccgtgttatcactgctgagttccccaccttc
ttcctggtcaccgcctacgtgcccaactctggccgaggcctggtgcgcctggactatcgc
aagacctgggacgtggagttcaaggcctacctgagcgacctggacaagcgcaagcccctg
gtgctgtgtggcgatctgaacgtggcccacgaggagatcgacctgaagaactccaaaggc
aataaaaaaaacgcaggcttcacagcagaggagcgtgagggcttcaatcagctgctggct
gcaggcttcaccgacagcttccgcgagctgtaccccgagcaggccaatgcgtacaccttc
tggacctacatgatgaactctcgctctaagaacgtaggctggcgtctggactactttgtg
ctgtcctctgctctactgccaggcctttgtgatagcaagatccgcaaccaagctatgggc
agtgaccactgccccatcactctgcacatggttgtgtag
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