Oncorhynchus mykiss (rainbow trout): 110490690
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Entry
110490690 CDS
T07259
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110490690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110490690
03036 Chromosome and associated proteins [BR:
omy03036
]
110490690
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110490690
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110490690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
110490690
NCBI-ProteinID:
XP_036812545
UniProt:
A0A8K9UIH7
LinkDB
All DBs
Position
21:5120120..5173429
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AA seq
925 aa
AA seq
DB search
MDWDQNELLSPIVRDAEVTRAARRKSSVQKKAQFNFLSPRDDNQGSTTTPARSLPCYTPG
SLFKQSFTPKSAARNPDVSAILGTGRRTPRFIHTPRPPLGTMSMNLDDSDWTNSLYPSPL
SGLGLGDTSFTDDINMSSVMLKEEDPGEAASVSLFPEFLQSYLRHSSTAVFDLLGEYEAI
CQDKVGMLQRLVSRAAPGQQKSSKTAGMRWLLQQEMVTWRLITSLYRDRIQSELEDDIMM
DVAAPGVSEKVVMEQLFQRDAVVRQSQLVVDWLESIAKDEIGDFSDNIEYYAKSVYWENT
LHALKLRRNTSSTGFNVPLVTELDPDAPIRQRRPLADLDREDDARLLKYLFTLLRAGMTD
EAQRLCKRCGQAWRAATLEGWKLYHDPNINGGGAELLPVEGNPQRCVWKVCCWRMADNEH
FSRYERAIYAVLSGNLKRLLPVCESWEDSVWAYFRVLVDSLVEQEVRSSGMGSEELEELP
REYLEANWTLEKVFEELLATESKKVLEETKEHYHIIQKLVILGDLDGLLEEFSNWLTRSP
ALPPHLLRFMTHLVLFYRSLGMQLKEEVSVDVLKAYISLLMREKHVDLIAFYVSHLPPDL
ATAQYALFLEEVTEAEQRQRCLELAREAGLDVAAVTKMVVENIRERDTEEFAHHDLTPAL
DTGTSAEDQRKIDVIDWLVFDPAQRAEALKQSNAIMRKFLACKKHQAAKVVFGKVPEDSM
REIYRQWEELGLDTPLPAEDENAIREHLCVRAYLEAHEAFNEWFHHMNSPPQKPSLPAQA
KFTEKVAYEMKENEYQLEHDSWTGRLGALTEDVKERIYNVLLFVDGGWMVDVREDTEEDP
ERGHQMVLLRRLCLPMMSFLLQTVLQRTQRHQESLRLADIIASDQHRLYEVFSKDELRKF
LQKMRESSLLLLDKGLDPLGYEIQP
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggactgggaccagaatgagttgctgtcgcctattgtacgagatgccgaagtgaccaga
gcagcacgccgaaagagttcagttcagaagaaggctcaattcaacttcctttctcctcgt
gatgacaaccaaggtagtaccaccacacctgcccgttccctgccctgctacacacctgga
tccctcttcaaacagtccttcaccccgaagagtgctgctaggaacccagatgtgtcggcc
atcttggggacagggcgcaggactcctcgtttcatccatacaccgcgacctcccctgggc
actatgagcatgaacctggatgacagtgactggaccaacagcctgtacccgtctcctctg
tccggcctgggactgggggacaccagctttactgacgacattaacatgtcctctgtaatg
ctgaaggaggaggatcccggagaggctgcgtcagtcagtctgttcccagagttcctccag
tcctatctcagacactcctccactgctgtctttgacctgctgggggaatatgaagccatc
tgtcaagacaaggtgggcatgctccagaggctggtatcgagggcagctccagggcaacag
aagtcctctaagactgctggtatgagatggcttttacagcaggagatggtcacctggcgc
ctcatcacttctctatacagagacaggatccagtcagagctggaggatgacatcatgatg
gatgtggctgctcccggtgttagtgagaaggtggtgatggaacaacttttccagagagat
gctgtagtacgccagagtcagttggttgtggattggttagagagtatcgccaaagatgaa
atcggggacttctccgacaacattgaatactacgccaagtctgtctactgggagaatacc
cttcatgctctgaaactgaggagaaacacctccagcacaggcttcaatgttcccctggtt
actgagctggaccctgacgcccccatcagacagagacgtcccctggcagacctggacaga
gaggatgatgccagactgctgaagtacctcttcaccctcctcagagcgggcatgacagac
gaggcccagaggctgtgtaagcgctgtggccaggcatggagagctgctactctggaggga
tggaagctgtaccacgaccccaacatcaacggaggcggggcagagctgctaccggtggag
gggaaccctcagcgctgtgtgtggaaggtctgctgctggaggatggctgataatgaacac
ttcagcagatatgagagagccatctacgctgttctgagtgggaacctcaaacggctgctc
ccagtgtgtgagtcgtgggaggacagtgtgtgggcctacttcagggtcctggtagactct
cttgtggaacaggaggtccggtcctcagggatgggcagcgaggagctggaggagctgcca
cgagaatacctggaggccaactggacactagagaaggtgtttgaggagctgctggcaaca
gagtcaaagaaagtcctggaagagacgaaagaacactaccacattatccagaagttagtt
atcctgggtgacctggacggtctgttggaggagttcagtaactggttgaccaggagtcct
gctctgccccctcacctgctgcgtttcatgacacacctggtgttgttctaccgcagtctg
ggcatgcagctcaaggaggaggtatcagtggatgtcctgaaggcctacatctctctgttg
atgagggagaagcacgttgatctgatagccttctatgtcagtcacctgccgccagacctg
gccaccgcacagtacgctctcttcctggaggaggtcaccgaggctgagcagagacaacgc
tgtctggagctggccagggaggcaggtttggacgtggcagcagtcactaagatggtggtg
gagaacatcagagagagagacactgaggagttcgctcatcatgacctcacccctgcactg
gacactggcacctcagcggaggaccagaggaagatcgatgtgattgattggctggtgttt
gaccccgcccagagagctgaggccctcaaacagagcaacgccatcatgaggaagttcctg
gcctgtaagaaacaccaggcagctaaggtggtgttcggtaaggtccccgaggactccatg
agggagatctaccgccagtgggaggagctaggcctggacactccccttcccgcggaggat
gagaatgccatcagggaacacctgtgtgtccgtgcttacctggaagctcatgaggcgttt
aatgagtggttccatcacatgaactccccccctcagaagcccagcctgccggctcaggcc
aagttcactgagaaggtggcctacgagatgaaggagaacgagtaccagctggaacatgac
agctggaccggccgtctgggggctctgactgaagacgtgaaggagaggatctacaacgtc
ctgctgtttgtggacgggggctggatggtcgacgtcagagaggatacggaggaggacccc
gagagaggccaccagatggtgctgcttcgtagactctgtctgcctatgatgtccttcctg
ttgcagacagtactgcagagaacacaacgtcaccaggagagtctcagactggctgatatc
atcgcctcagaccaacaccgcctctacgaggtgttctccaaggatgagctgaggaagttc
cttcagaagatgagggagtcgtctcttctcttattggataagggtctagacccgctgggg
tacgagatccaaccataa
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