Oncorhynchus mykiss (rainbow trout): 110490733
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Entry
110490733 CDS
T07259
Symbol
celsr1a
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1 isoform X1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04310
Wnt signaling pathway
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110490733 (celsr1a)
09133 Signaling molecules and interaction
04519 Cadherin signaling
110490733 (celsr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110490733 (celsr1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
omy04030
]
110490733 (celsr1a)
04515 Cell adhesion molecules [BR:
omy04515
]
110490733 (celsr1a)
Peptidases and inhibitors [BR:
omy01002
]
Mixed peptidases
Family P2
110490733 (celsr1a)
G protein-coupled receptors [BR:
omy04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
110490733 (celsr1a)
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110490733 (celsr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
Ig_CLSTN
GPS
Cadherin_FAT4_N
Laminin_G_1
EGF
Ig_Cad99C_N
EGF_laminin
EGF_TEN
Dicty_CAR
Fibulin_C
hEGF
Frizzled
Motif
Other DBs
NCBI-GeneID:
110490733
NCBI-ProteinID:
XP_036800349
Ensembl:
ENSOMYG00000029453
LinkDB
All DBs
Position
15:complement(47584674..47707520)
Genome browser
AA seq
3066 aa
AA seq
DB search
MELPMYWIWVCVLFNVPLLGCFELHLSETLQTGTVLANLSLGPGWTYKIDRTLTPKYIQN
FLQVEWQEGALRVYRKVDCVRLLRNPVPVYIRIGSLTSENFVLTHFNTFVHGQDCFIKYK
RKSTIGKLDIHISYLSKLEATSCLSAGNLLVNVTKLLPAFTRNTNFSASSCTTGKDLRAV
FKHGNLLLDEDYCLGHGEVHLHCTLRALSDRSVRVSVRVSLRLVTVVEGETHGQLSSSHT
IQIVPGKWNHRKRRNVNTPPQFQLPNYQVSVPENEPSGTRVITLKATDPDDGEAGRIEYG
MEALFDSRSNDFFVINPQTGAITTVQPLDREVKDTHVFKVMVTDNGSPRRSATSYLTVTV
SDTNDHGPVFEQTEYRVTIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNGDGVNAGFE
IDPRHGLVRIRERPDRETMSQYQLIVEANDQGKDPEPRSATATVNISVEDENDNYPQFSE
KRYVVQIPENVAVNSKVTQVQATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVIDVINP
LDYEMIREYNLRIKAQDGGRPPLINGTGMVVVQVVDVNDNAPMFVSTPFQSTVLENVAIG
YSVIHIQAIDADSGDNARLEYHLTDTSPGFPFTINNSTGWITVATELDRETTEFYTFGME
ARDCGTPAMSSSASVSITVLDVNDNIPTFTEKVYSLKINEDAVVGTSVLTVTAVDRDVNS
VVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYVLTVTASDGTRFDMAQVFIN
VTDANTHRPVFQSANYQVMISEDRPVGSIVVIISATDEDTGENARITYIMEDNVPQFKID
PDTGAITTQMEIDYEDQASYTLAIVARDNGIPQKSDTTYVEIIILDANDNTPQFLRDMYQ
GTVFEDAPVYTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKLDR
ENVPVYTLKAFAVDKGIPPLKAAVDIQVSVLDINDNAPVFEKDELFIYVEENSPVGSVVA
RISATDPDEGTNAQIMYQIVEGNIPEVFKLDIFKGDLTALTDLDYESRTEYVIVVQATSA
PLVSRATVHIRLVDINDNDPVLQNFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVSDKLH
YSFESGNELNLLVLNAVTGELKLSRDLDNNRPLEAPMTVSVSDGIHRVTALCTLRVTIIT
DDMLTNSITVRLENMSQERFLSPLLSLFLEGVAAVLSTSRQAVFVFNIQNDTDVRGAILN
VTFSALQPGGPPGRYFPSEELQEQIYLNRTLLRLISSQQVLPFDDNICLREPCENYMKCV
SVLKFDSSPPFISSDTVLFRPIHPINGLRCRCPAGFTGDYCETEIDLCYSGPCRNNGKCR
SREGGYTCECQEDFTGEHCEVNARSGRCVPGVCKNGGKCVDLLVGGFMCQCPPGEYEKPY
CEMTTRSFPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNEKHDFIALEIIEE
QIQLTFSAGETKTVVHPFVPGGVSDGQWHSVQLHYYNKDSLHLLGSSGVLGVPLYTAWLE
LTHKEPNIGRLGIPHGPSGEKVAVVAVDDCDIAMAVRFGNQISNYSCAAQGTQTGQKKSL
DLTGPLLLGGVPNLPEDFPVRNRDFVGCMRNLSIDSQPTDMASFIANNGTTAGCPAKRNF
CTKDLCQNRGVCVNKWNTYSCDCPLGYGGKNCEQVMPSPQHFDGQALVSWSDLDVTIAVP
WYMGLMFRTRQGTGTLMRATAGDFSTVNLLISDQYVRFEVFLGSERVALLGFPQVRVNDG
EWHHVLVELQSVKDGKDIKYMALVSLDYGLYERSVEIGNELPGLRLRALYLGGLPGEGNH
VHEGFTGCIQGVRMGETSTNVVNVNMLLGFKIHVEDGCDLADPCDSNICPENSHCSDDWS
AHTCVCDPGYFGRECVDACHLNPCEHVSTCVRKPSSSHGYTCECGQNYYGQYCQNKVEKP
CPRGWWGNPMCGPCHCDVSKGFDPDCNKTSGECRCKDNYYQPKDEDTCYPCECFPLGAHS
RTCDPHTGQCPCKAGVIGQQCNRCDNPFAEVTATGCEVVYEGCPKAFDQGIWWPKTKFGR
PAAMNCPKGSIGTAIRHCNDEKGWLPPELFNCTTVSFTQLMKMNEEMHRNVSRMDRERAN
AIVRLLHNATNHMDSYYGNDVKTAFQLLTRVLQYESQQTGFDLTATRDAEFNENLVRAGS
AILDPGTRDHWEQIQRSEGGTAHLLRHFEDYTNTLAQNMRKTYLKPFTIVTDNMIIVVDY
LDTSVPGRASFPRFHEIQEYYTKDLTSSVRFPQFNTRPQEVPDKVVDPSPSVEPSHTGAP
EEDHTHSNKRRRHVESAAPLPVAVVIVFRSLGQLLPERYDPDRRSLRLPNRPVINTPIVS
TLVYSEGSPLSSPLDPPITLAYTLLETEERTKPVCVFWNHSIAIGGTGGWSSKGCELLNR
NNTHISCQCDHMASFAVLMDISKREHGDVLPLKIVTYTTVSASLVALLLTFILLALLRKL
RSNLHSIHKNLVAALFFSELVFLIGINQTDNPFVCTVIAILLHYFYMCTFAWMFVEGLHI
YRMLTEVRNINHGHMRFYYAMGWGIPAIITGLAVGLDPQGYGNPDFCWLSVHDTLIWSFA
GPISVVVLVNIVIFVLAAKASCGRRQRSFQKSGAIPALRMAFLLLLLISATWLLGLMAVN
SDVMTFHYLFAIFSCLQGIFIFFFHVIFNKEVRKNLKNVFTGKKASPDESSTTRASLLTR
SLNCNNTYTEDGPLYRSAIAESAVSLESTVRGDSGQKHSVSSGTANAGHTDLDGPLFHRN
GTKGGDDSDSDSELSVDEHSSSYASSHSSDSEDDDMDIKPKWNNERPPLHSTPKGSSIKV
EAVSNHVRPHWPKEAMTASDSEDPGGAERLRVETKVNVELHQENKHNHVGERGETPQGRE
TPTRENGPLSLPSNGPPSLGTHQPEPKKGILKNKITYPPPLTDKNMKNRLREKLSDYNPP
SKTPSVASNDGVHPVSVGNSAIIKPPLAPRPQLPQNGGVAMSMKAMTTNGGHESDSDRKT
RVSLPL
NT seq
9201 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccgatgtattggatctgggtttgtgttctattcaatgtgcccttgctggga
tgtttcgagctacacctttcggagacgttacaaactgggaccgttttggcaaatttgtcc
ctggggcccggttggacttacaaaatcgacaggactttaactcctaaatacattcagaac
tttttacaagtggaatggcaagaaggagctctccgtgtgtaccgaaaagtggattgtgtg
cgtttattgaggaacccggtgcctgtctatatcaggatagggtcgttgacgtctgaaaat
tttgttttgacacatttcaatacatttgtacacggacaagactgttttatcaaatacaag
agaaagagcacaataggtaaactcgacattcacatcagttacctttccaaactggaagca
acttcctgcttatccgcaggtaatttgcttgtgaatgtaacaaaacttttgcctgccttt
acgcgaaataccaatttttctgcctcctcatgtactactgggaaagacttgagagcagtt
tttaaacatggcaatctattgctggacgaagactactgtttgggacacggagaggtgcat
ttgcattgtacactgcgtgctctgagtgaccggagcgtccgcgtctccgtgcgcgtgagt
ttgcggttggtgacggtggttgagggagagacccatgggcagttatcatcatcacacacc
atccagattgtgcctggcaaatggaaccaccgaaaacggagaaatgtgaacacacctccc
cagtttcagctccccaactaccaggtgtctgttcccgagaatgaaccatcagggacccgc
gtcatcacactgaaggccactgatccggatgatggagaggccggtagaatagagtatgga
atggaggccctctttgacagcagatccaacgacttttttgtaataaaccctcagacaggt
gctattacaacagtgcagcctttagacagagaggtcaaagacacacacgtcttcaaagta
atggtaacagacaacggctccccgcggcgctcagccacgtcttacctcactgtgacggtc
agcgacaccaacgaccacgggccggtgttcgagcagactgaataccgggtaaccatacgg
gagaatgtagaggtgggctttgaggtcatgaccataagagccaccgacggagacgcaccc
tccaacgccaacatggtctataaaatcgtcaacggcgacggagtgaacgcgggttttgag
atcgacccgcgccacgggctagtgaggatcagagagcggcccgacagagagaccatgtcc
cagtaccagctgatcgtggaagccaacgaccaggggaaagaccctgaaccccggagcgcc
acggccaccgtcaacatctctgtagaggacgagaacgacaactatccccagttcagtgag
aaacgttacgtggtccaaatccctgagaacgtggccgtcaactctaaagtcacccaagtt
caggccacggacaaagatgaggggaacaatgctaaggtccactacagcatcatcagtggc
aatgtaaagggacagttctacatccactctcccactggggtcatcgatgtcattaatccc
ctggattacgagatgattagggagtataatttacggattaaagctcaggatggtggcagg
cctccgttgatcaacgggactgggatggtggtggtccaggtggttgacgtaaatgataac
gctcctatgttcgtcagcacgccgtttcaatccactgtgctggagaatgtggccattggc
tactcagtaatccacatccaggctatagatgctgattctggggataacgcccgtctggag
taccatctcaccgacacctcccctggtttccccttcaccatcaacaatagcactgggtgg
atcacggtcgccacggagctcgacagggaaaccaccgagttctataccttcggcatggaa
gcaagggattgtgggacgcctgcaatgtcatcctcagccagcgtgagcatcacggtccta
gatgtgaacgacaacatcccgaccttcacagagaaggtgtattctctgaagattaatgag
gatgctgtggtggggaccagtgtgttgacagtgacagccgttgacagggatgtaaatagt
gtggtaacctatcagatctctagcggaaacaccaggaatcgttttgccatcaccagtcag
agtggaggcgggctcatcaccttggcgttacccttagactacaaacaggagcgccagtac
gtcctgacggtaactgcttcggacggcacacgttttgacatggcacaggtgttcatcaac
gtcacggacgccaacacacaccgtcccgtgttccagagcgccaactaccaggtgatgatt
agcgaggaccggcccgtggggtccattgtggtcatcatcagcgccaccgacgaagacacg
ggtgaaaacgctcgcatcacgtacatcatggaggacaacgtcccccagtttaagatcgac
cccgacacgggcgccatcaccacccagatggagatagactacgaggaccaggcgtcgtac
acgctagccatcgtcgccagggacaatggcattcctcagaagtccgatacgacctatgtg
gagataataatcctggatgccaacgacaacacacctcagttcctacgggacatgtatcag
gggactgtatttgaggacgcacccgtttacaccagcgtgctccagatatctgcctccgac
agggactccgggtccaacggcaggctgagctacaccttccagggtggagatgacggggag
ggggacttcttcatcgagccctactctggcatcatcagaacagccaggaagttagacaga
gagaacgtgcctgtgtataccctgaaggccttcgctgtggataaggggattcctcctctc
aaagcagcggtggacatccaggtgtctgtgctggatatcaacgacaatgcgcccgtgttc
gagaaggacgaactgtttatctacgtggaggagaacagccccgtcggttccgtcgtggct
cggatcagcgccaccgacccagatgagggaaccaacgctcagatcatgtaccagatcgta
gaggggaacatcccagaggtcttcaagctggacatcttcaaaggcgatctcaccgccctc
acggacctcgactacgagtccagaaccgagtacgttattgtggtccaggccacatccgct
ccgctcgtcagccgggccacagtccacatccgtttagtcgacatcaatgacaacgacccg
gttctgcagaactttgagattatcttcaacaactatgtgaccaacaagtccaatagtttc
ccctcagggataatcgggaaggtacctgcccatgacccagacgtgtcggataaactccac
tacagttttgagtcggggaatgagctgaacctgctagtgctgaatgcagtcacgggggaa
ctgaagctcagcagagacctggataacaacagacctctagaggcccccatgactgtctct
gtctcagatggtatccatcgggtcacagcattgtgcaccctgcgggtcaccataatcaca
gacgacatgttgaccaacagcatcacagtgcgcctggagaacatgtctcaggagcgcttc
ctgtcccctctgctgtccctcttcctggaaggtgtggcagccgtgctctccaccagccgc
caggccgtctttgtgttcaacattcagaacgacacagacgttcgtggcgccatcctcaac
gtgaccttctcggcgctgcagccagggggtcccccggggaggtacttcccctccgaggag
ctgcaggagcagatctatctgaaccgcaccctgctccgactaatatcatcacaacaggtg
cttcccttcgacgacaacatctgcctgagggagccgtgtgagaactatatgaagtgtgtg
tctgtgctgaagtttgacagctccccgcccttcatctcctccgacacggtgctgttccgg
cccatccaccccatcaacggtctgcgctgccgctgtcctgcaggcttcaccggggactac
tgtgagacggagatagacctctgctactcaggaccctgcaggaacaacgggaagtgtcgc
agccgagaaggaggctatacatgcgagtgtcaggaagacttcactggtgagcactgtgag
gtgaacgcccggtcggggcggtgtgtcccgggggtgtgtaagaacggggggaaatgtgtg
gacctgctggtgggggggtttatgtgccagtgtcccccgggagagtacgagaagccttac
tgtgagatgaccaccaggtctttccctggtcagtccttcatcaccttcagaggactgcgg
cagaggttccactttactgtctcgttcatgtttgccaccagagagaggaatgccctgctg
ctgtacaatgggagatttaacgagaaacacgactttatcgccttggagattatcgaggaa
cagatccaactcaccttctctgcaggcgagactaagaccgtggtccatccctttgttccc
ggtggggtcagtgacggccagtggcactctgtccagctgcactactacaacaaggacagc
ctgcacctgctggggtccagtggggtgctgggggtccctctttatactgcctggctggag
ctgacacacaaggagcccaacattggtcgtctggggatcccccatgggccctcgggtgag
aaggtggctgtggttgctgtggacgactgtgacatcgccatggcagttcgctttggcaac
cagatcagcaattactcctgtgctgcccagggcacccagaccggacagaaaaaatcattg
gacctgacagggccgctgctgctggggggtgttcccaacctgcccgaggacttccctgtg
aggaacagagactttgtgggctgcatgaggaacctgagcatcgacagccaacccaccgac
atggccagcttcatcgctaacaacggaaccactgcaggttgtcctgccaagaggaacttc
tgtactaaggatttgtgtcagaacagaggagtgtgtgtcaacaagtggaacacctacagc
tgtgactgtcctctgggctatgggggcaagaactgcgaacaagtgatgccgtctccgcag
cactttgacggccaggccctggtgtcgtggagtgacctcgacgtcaccatcgctgtgccc
tggtacatgggcctgatgttccggacgaggcaaggcacaggcacgctgatgcgggctacc
gctggagacttctctactgtcaatctactgataagtgatcagtacgtgaggtttgaggtg
tttctgggatccgagcgggtagcgttgctgggcttccctcaagtccgggtgaacgatggg
gagtggcaccatgtccttgtggagctgcagagcgtcaaagacggcaaggacatcaagtac
atggccctggtgtcactggactacgggctatacgagaggtctgtggagattggtaacgag
ctgccaggtctgaggctgagggctctgtatctgggaggattaccaggagaggggaaccac
gtccacgagggcttcaccggatgcatacagggtgtgcgcatgggtgagacgtccaccaac
gtggtcaatgtgaacatgctcctgggctttaagattcatgtagaggacggctgtgacctg
gccgacccctgtgactccaacatctgccctgagaacagccactgcagcgacgactggagc
gcgcacacctgcgtctgcgacccagggtactttgggagggagtgtgttgacgcgtgtcac
ctcaacccctgcgagcacgtgtccacctgcgtccgcaagcctagctcctcccatggctac
acctgcgagtgtggacagaactactacggacagtactgccaaaacaaggttgagaagccg
tgtcctcggggctggtgggggaaccccatgtgtggcccctgccactgtgacgtcagcaaa
gggttcgaccctgactgtaacaagaccagtggagagtgtcgctgcaaggataactactac
cagcccaaagatgaggacacctgttacccctgtgagtgcttccctctaggggcccactcc
cgtacttgtgacccccacaccggacagtgcccctgtaaagccggggtcatcggacaacaa
tgtaaccgctgtgacaaccccttcgctgaggtcaccgccaccggttgtgaggtggtgtac
gagggctgtcccaaggccttcgaccaagggatctggtggcccaagaccaaatttggccgt
cctgcagccatgaactgtcccaaaggatctatcggaactgctatccgccactgcaacgat
gagaagggctggctgcctcctgaactcttcaactgtaccacagtctccttcacccagctc
atgaagatgaatgaggagatgcatcgtaacgtgtccaggatggaccgcgagcgcgccaac
gctatcgtccgcctgctccacaacgccaccaaccacatggacagctactacggcaacgat
gtgaagacagcgtttcagctgctgaccagggtcctccagtacgagagtcagcagacaggc
ttcgatctcacggccacgagagacgcagagttcaacgagaatctggtgagagcgggcagt
gccatcctagaccctggcaccagagaccactgggagcagatccagcgctctgaggggggc
accgcccatctgctgcgccactttgaggattacaccaacaccctggcacagaacatgagg
aagacctacctcaaaccattcaccatcgtcactgacaacatgatcattgtcgttgattac
ctggacacgtctgtccctgggcgggcctcattccctcgcttccatgagatccaggagtac
tacaccaaagacctcacgtcctctgtccgtttcccacagttcaacacgaggccccaggag
gtccccgacaaagtagtcgatcccagccccagcgtcgagccctctcacaccggcgcccct
gaagaggatcacacccattccaataagagacgccgccatgtcgagtccgccgcccccctg
cctgttgccgtggtgatagtgtttaggtcgttgggtcagctcctccctgagagatacgac
ccggaccgtaggagcctcaggctgcccaaccgtccagtgatcaacacccctatagtaagc
acgttggtatacagcgagggttctcccctctcctccccccttgacccccccatcacactg
gcgtacacactactggagacagaggagaggaccaaacctgtgtgtgtgttctggaatcac
tccattgcgattggtggtacggggggctggtcgtccaagggatgtgagctgctgaacagg
aacaacacacacatcagctgtcagtgtgaccacatggccagcttcgctgtgctcatggac
atctccaagagagagcatggtgacgtgttacccctaaagattgtgacctacaccacggtg
tcagcctccctggtagccctgctcctcaccttcatcctgctggctctactcaggaagcta
cgctctaacctccacagcatccacaagaacctggtggcggcactcttcttttccgagctc
gtcttcctcatcggcatcaaccagactgacaacccatttgtgtgtacggtgatcgccatc
ctgctccactacttctacatgtgtacgtttgcctggatgtttgtggagggcctccacatc
taccgcatgctgacggaggtccggaacatcaaccacggtcacatgaggttctactacgcc
atgggctggggcatacctgcaatcatcacaggtctggcagtgggtcttgaccctcagggc
tatgggaacccagacttctgctggctctctgtccacgacaccctcatctggagcttcgca
gggcccatctctgtagtcgtcctggtcaacatcgtcatctttgtactggcagccaaggca
tcctgtggacgcaggcagaggtccttccagaagtctggagccattcctgctctgaggatg
gccttcctgctcctattgctcatcagcgccacctggctgttgggcctcatggccgtcaac
agtgacgtcatgaccttccactacctgttcgccatcttcagttgtctgcagggcatcttc
atcttcttcttccatgtgatctttaataaagaagtgaggaagaatctgaagaatgtcttt
accgggaagaaggcttcaccggatgagtccagcactaccagagcatctctactcacccgg
tctctgaactgtaacaacacgtacactgaggacggtcctctgtacaggtcagccattgcg
gagtccgctgtttctctggagagtaccgtcaggggtgactctggccagaagcacagtgta
tcgtcagggacagctaacgcaggtcacactgacctggacggacctctgttccataggaac
ggcactaaaggaggagacgactcggactcggacagtgagttgtctgtcgacgaacacagc
tcttcctatgcctcgtctcactcttcggacagcgaagatgatgacatggacatcaagccc
aagtggaacaacgagagaccgcctctacacagcacacctaaagggtccagcatcaaagtg
gaagcagtgtccaatcatgtgaggcctcactggcccaaggaggcgatgacagccagtgac
agcgaggatcctgggggtgcagaacgtctgagggtggagaccaaggtgaacgtggagctg
caccaggagaacaaacacaaccacgtaggagagagaggagagacaccccagggcagggag
acccccactagggagaatggacctctcagtctaccctccaatgggcctcccagcctgggc
acccaccagcctgagcccaagaagggcatcctgaagaacaagatcacgtaccctcctccc
ttgaccgacaagaacatgaagaaccggctgcgtgagaagctgagtgactacaaccctcca
tccaagaccccctccgtggcctccaacgacggggtgcaccctgtctctgtgggcaacagc
gcaatcatcaagccgccgcttgccccacggccacaattaccacagaatgggggcgtggct
atgagcatgaaggcgatgacgaccaacggaggccacgaatcagactcggacaggaaaacc
agagtctctctgcccttatga
DBGET
integrated database retrieval system
