Oncorhynchus mykiss (rainbow trout): 110490887
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Entry
110490887 CDS
T07259
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110490887
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110490887
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
110490887
NCBI-ProteinID:
XP_036801581
LinkDB
All DBs
Position
15:complement(6787724..6804698)
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AA seq
527 aa
AA seq
DB search
MDGMGDVAVGVKRGSDELMSTSVYNSGSDMSSIGDVTANGSDSKSNGSDSKKLRVEDRME
APPSRVLHIRKLPNETSESEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMINYY
STVTPHVRNVPVFIQYSNHKELKTDSGNQRAQAVLQAVSAVQGGGTPTSGSIVDLTAASS
PVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPPTAQQAKVAL
DGQNIYNSCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAIDPNMAAAFQGKD
SNSLLGGLSPLNAAAAAAAAAGRVALSGHSGASGVLLASNLNEEMVTPQSLFTLFGVYGD
AQRVKILYNKKDSALIQMADANQAQLAMSHLNGQKMHGKPIRVALSKHTSVQLPRDGLDD
QGLTKDFTNSPLHRFKKPGSKNFQNIFPPTTTLHLSNIPTDVSEEDLRLLFSNAGGTVNA
FKFFQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatgggggatgttgcagttggtgtgaagagaggatcagatgagctgatgtca
accagtgtctacaacagtggatctgacatgagcagtatcggtgatgttacagccaatggg
agcgacagtaaatccaatgggagcgacagtaaaaagctgagagtggaagaccggatggag
gcccctccctctcgtgtgctgcacatcagaaaactgcccaatgaaacttcagaatcggag
gtcattgccctggggttacctttcgggaaggtcacaaatatcctgacgcttaaggggaaa
aaccaggctttcttggagctgggcacagaggaagcagcgataaccatgatcaactactac
tctactgtgacaccgcatgttcggaacgtccccgtattcatccagtattccaaccacaaa
gaactcaaaacagatagtgggaaccagcgggcccaggcagtcctgcaggcggtgtcagcg
gtccaaggaggaggtactcctacgtcgggctccattgtagatctaaccgccgcgtccagc
cctgtgctcagaataatcatcgataacatgttctacccggtcactctggatgtgctgcag
cagatcttctcaaagtttggcacagtcatgaagatcatcacattcaccaagaacaatcag
ttccaggctctgctgcagttcaacgacccacccaccgcccagcaggccaaagtagccctg
gatggtcagaacatctacaactcgtgctgtacgctccgcatcgactactccaagctggtc
aacctgaacgtgaagtacaacaacgacaagagccgtgactacacccggccagagctccct
gcaggggacggacagcctgccatagaccccaacatggctgctgcctttcaaggcaaggac
tccaactctctgctcggtggcctgagcccgctgaatgctgccgcggcggctgctgctgct
gcagggagggtagctctgtccggtcactctggcgccagtggcgtgctcctggcctccaac
ctcaacgaagagatggttacgccccaaagtctgtttactctcttcggggtgtacggtgat
gcccagagggtgaagatcctctacaataagaaagacagtgctctgatacagatggctgat
gccaaccaagcccagctagctatgagtcacctgaatgggcagaagatgcatgggaaacca
atcagggtggctctgtctaagcacacctcggtgcagctgcccagggatggactggatgac
cagggcctcaccaaagacttcactaactcgcccctgcaccgcttcaagaagcctggctcc
aagaacttccagaatattttccctcccaccactactcttcacctctccaacatcccaacg
gacgtttccgaggaagacctccgactgctcttctccaacgccgggggaaccgtgaacgcg
ttcaagttctttcaggatcacaaaatggcgctgctccagatgtcaacggtggaggaggcc
atccagggtctgatcgacctccacaactacaacatgggtgacaaccatcacctgagagtg
tccttctccaaatccaccatctaa
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integrated database retrieval system
