KEGG   Oncorhynchus mykiss (rainbow trout): 110490926
Entry
110490926         CDS       T07259                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110490926
Enzymes [BR:omy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110490926
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110490926
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-RING_4 zf-RING-like zf-P11 Prok-RING_4 zf-RING_16
Other DBs
NCBI-GeneID: 110490926
NCBI-ProteinID: XP_021420023
UniProt: A0A8C7VJ68
LinkDB
Position
15:complement(15018294..15024376)
AA seq 718 aa
MVMDPPGGRDERRRQAERLRREEAYYHFINDLSEEEYRLMRDSNLLGTPGEVTAEELRQR
LDGAKERVSSQPRPEPRPQNTEAGEEEGSSGTAEPGAETSNGDSLLEWLNTFRRTGNATR
SGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPSELSPVPPPSTASI
RTSPSTRPSPYTPARPSPYPSPRATLGRRAQTRRTRSTTTTPPLTPAPFTSPLSPPTALR
STTALHLPPFPITPPTLQDQSSPPQLQSPSGASSQEERQEEGVATLDCPRVAPQSGPQGA
SVGREPHSSRTRSRGRTRRAVAGGGTSSRSSRRRSRSPLQRNPAPNSATLSPNGGSGNGG
SNNIHTAEPSNGTASVSMETGEAVSEPAVVSEPGPEAEEQEGEAHTAGAGGAGGVRRHPT
IMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTY
VSTIRIPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADSETTGGTPGHQDP
AGPNANTTTQAYHGNESGTGVEGQAGGVEMETEGVAGAEEEGGQERLVGSDGGAGGVPTP
NEGRPTSRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDNLATRTYGQASL
EGEAGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILPVHQD
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggtgatggaccctcccggtgggcgagacgagcggcggcgtcaggcggagcgtcttcga
agggaggaggcgtactatcacttcatcaacgatctgagcgaggaagagtaccgcctcatg
agagacagcaacctgctgggcacacctggtgaagtgacagcggaggagctacggcagcgc
ctggacggggcaaaggagcgtgtgtcatctcagccacgacctgaaccacgcccacaaaat
acggaggccggagaagaggaggggagcagtggtactgctgagccgggagcagagacatct
aatggcgactcactgctggagtggctgaacacgttccgacgaaccgggaatgccacacgg
agcggccagagcggcaaccagacgtggcgcgcggtcagccgcaccaaccccaacagtgga
gagttccgcttcagcctggagatcaacatcaaccatgagcagccggaaccaggggagcac
agtgacacccccgacccctcagagctgtcccctgtcccccctccatccacagcgtccata
cgcacttccccttccactcgcccctcaccctacacccctgcccggccctccccctatccc
tcacctcgagcaaccctgggcaggagggctcaaacccgccgtacacgcagtactaccacc
acccctcctctgactcctgcacccttcacctcacccctgtccccccctactgctctaagg
agtacaacagccctccacctccccccattccccatcaccccccctacccttcaggatcaa
agcagccctccacagctccagtccccaagcggagcttcctcccaagaggagaggcaggag
gagggagttgctaccctggactgcccccgtgtagcgccccagtctggcccacagggggcg
tctgtggggcgtgagccacacagcagcaggactcgatcccgcggccggacccgcagggct
gtggcaggaggtgggacttcctcccggtcatctaggagacgtagccgctcccctcttcag
agaaaccccgcccctaactcggctaccttatcccctaatggtgggagtggaaatggtggc
tctaataatatccacactgccgagcccagcaatggaactgcttctgtctccatggagact
ggtgaagccgtgtcagagccggctgtagtatcagagcctggtccagaggcagaggagcag
gagggagaggcacacacggccggggcggggggcgccggaggggtacgccgccatcccacc
atcatgctggacctgcaggtgcgtcgcatccgaccgggagagaaccgggaccgagacagc
atcgccagccgtacccgctcccgggcccgcgctgctgagaataccgtcaccttcgagagt
gacagtggaggcttccggcgcaccatctcccgctcggagcgggccgggatccggacctac
gtcagcaccatccggatccctctgaggaggatcagtgagacgggcctgggggagcccagc
tccaccgccctgcgctccatcctcagacagatcatgaccggcttcggagagctcagctcc
ctcatggagacggaggctgactctgagaccaccgggggcacgccaggtcaccaggaccct
gctggacccaacgcaaacaccaccacacaggcctaccatggcaacgaaagtggaactggg
gtggaaggtcaggcaggaggggtggagatggagaccgagggagtggcaggggccgaggag
gaaggaggccaggagagattagttgggagtgacggcggtgccggtggagtccctaccccc
aatgagggtcggccgacgagcagggacacaaacaacctcgtggaaaacggcacactgccc
atcctgcgtctggcccacttctttctgctcaacgatgaggaggacgaggagcaccctcgt
ggcctgaccaaagagcagatcgataatctggccacgcgcacctacggccaggctagcctg
gagggagaggcggggcgcgcctgcagcgtctgcattaatgagtatgcccaggggaataag
ctgcgccgcctgccctgcgcccacgagttccacatccactgcattgaccgctggctctct
gaaaacaacacctgccccatttgcaggcagcccatcctccctgtgcaccaggactga

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