KEGG   Oncorhynchus mykiss (rainbow trout): 110491068
Entry
110491068         CDS       T07259                                 
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110491068
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110491068
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 110491068
NCBI-ProteinID: XP_036805946
Ensembl: ENSOMYG00000018321
UniProt: A0A8C7QNW0
LinkDB
Position
2:complement(50474632..50561307)
AA seq 1107 aa
MATQVEALLPNNPRIKPEENGHTSKMIQHGEDCPEKGVKQTCVADEGSNMKTNNSEQCWI
ATRELRSKQAKEESNNQEKDTLDQEMHTTDQTEDCVKCSKNEFAEAPPPKVNPWTKKKNA
VTVVSQNGQSHHEPPITTGPAKVVKAPNPRPRRGERVGDFGDAMKWPTPGEIATKETQIE
VVNQTVSCPMPVRQVREVGSTRRSPAPKKPVLKKEVKEKRDTNEEGKENQNAKSDDSGEE
KNGDEDSQKNSDEDSQKNGQKKKGNKHRWVPLMMEVKSEGPRERSASRNNSRQNEVPRMP
PNRKNDLRDGYRGKSEREWSDDHDEVSSVRSEGAPFRAGFRGRGRGRGRGRGSRGHPDYH
YGYKAYNGKDGAYGQKFGAPVTYYYDNMSSSDLYTVDQGLLKDYVKRQIEYYFSLGNLER
DFFLRKKMDQEGFLSLGLIASFHRVQALTTDVSLIIESLKDSKEVEIIDMKIRRKVEPEK
WPLPGQSMGPDHNQVDLTQLIHCPEFVPRQMPTKQTESAPGSPRSSTPTRGMTRASMQPK
MEQDVSNLKSMPKGLSASLPDLDSESWIEVKKRPKPSPARTKTPSLQQKEDALSPVPKAG
LSLVPSTASAKDEPEELDFMFDEEMEQMDGRRNTFTDWSDEDSDCEIADNDVNKILIVTQ
TPPYLRKHPGGDRTGHHTSRSKLTNELVKVINDGLYYYEADLWDDNYEPEYATIKQEVEN
FKKVHLISREEFDCLTPEPPVDPNQEVPPGPPKPQQIPVDALANKLFGAPEPSTIARSLP
TTVPDSPNYRSARTPRTPRTPHRKDLAMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPM
ECHVGWVMDSREHRSRTASVSSNASPSEGTPALGGIGCTPQSLPNFQHPSHELLKENGFT
QHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEG
YRYGLECLFRYYSYGLERKFRPNIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKNKNMG
IDPKLQECLSKFKRLEDFRIDPPMEEGGRKRHSSSGDCRRRHPSQGSSRPHSQTGFGPVR
PGPHQGGCQNQQPEPAPRSPDGALPPK
NT seq 3324 nt   +upstreamnt  +downstreamnt
atggctactcaggtagaggctctcctacccaacaatcctcgtattaaaccagaggagaat
gggcatacgagcaagatgatacagcatggagaggactgtcctgaaaagggggtgaagcag
acatgtgttgccgacgagggtagcaatatgaaaacaaacaactcagaacagtgttggatt
gcaacgagggagctacgctctaaacaagcaaaagaagagagtaacaatcaagagaaagac
accctggatcaagagatgcacacgactgatcaaacggaagactgtgtgaaatgcagtaaa
aatgagtttgctgaagcacccccgcccaaggtgaacccatggaccaagaaaaagaatgcg
gtgaccgtggtcagccagaatggacaatcacatcatgagccgccaatcacaacaggccca
gccaaggtggtgaaggccccaaacccccggcctcggagaggagaaagggttggagatttt
ggtgatgctatgaagtggccaacccctggggagattgcaactaaagaaacgcagattgag
gttgtgaatcagactgtgtcatgccccatgcccgtcaggcaggtcagagaagtgggctcc
acacggagatccccagcccccaagaagcctgtgctgaagaaagaggtgaaggagaagcgt
gacaccaacgaggagggcaaggagaaccagaatgcgaagtcggacgactctggagaggag
aagaacggcgacgaggactctcagaagaacagcgacgaggactctcagaagaacggacag
aagaagaaaggaaacaagcataggtgggtgccgctgatgatggaggtgaagtctgagggg
cccagagaacgctcggcctcaaggaataactcccgtcagaacgaggtgcccaggatgccc
cccaacaggaagaacgacctccgagacgggtacagagggaagtccgagcgtgaatggagt
gatgaccatgatgaggtgtccagcgtgaggagcgagggtgctcccttccgtgccgggttc
cggggtcgtggcaggggccggggacgaggcagaggctccagaggtcaccctgactaccat
tatggctacaaggcctacaacgggaaggacggtgcctacggacagaagtttggtgctcca
gtgacctattactacgacaacatgagcagcagtgacctgtacacagtggaccagggcctg
ctcaaggactatgtcaaaaggcagattgagtactacttcagccttggcaacctggagcgg
gatttcttcctgcgcaagaagatggaccaggagggcttcctgtcacttggcctgattgcc
agcttccacagggtgcaggccctcaccactgatgtcagcctcatcatagagtctttgaag
gacagcaaagaggtggaaatcattgacatgaagatccgtcggaaggtggagccggagaag
tggccacttcctggccagtccatgggaccggaccacaaccaggtggacctgacccagctc
atccactgccccgagttcgtgccccggcagatgcccactaagcagacagagtctgctcca
gggtctccccggtcttccacgcccaccaggggcatgaccagggcctccatgcagcccaag
atggagcaggacgtgtccaacctgaagagcatgcccaagggactgtcggccagcctgccc
gacctggactctgagtcctggatcgaggtgaagaagagacccaagccctccccggccaga
accaagaccccttcgttgcagcagaaggaagacgctctctccccggtgcccaaggcaggc
ctcagccttgtcccctccaccgcctcagccaaggatgagcccgaggagctggacttcatg
tttgacgaggagatggagcagatggatggccgcaggaacacatttaccgactggtccgat
gaggactcggactgcgagatcgccgacaatgacgtcaacaagatcctcattgtgacacag
acgccgccctacctgcgcaagcacccagggggtgaccgcacgggccaccacacgtcgcgc
tccaagctgaccaatgagctggtgaaggtgatcaacgacggcctgtactactatgaagca
gatctgtgggatgacaactacgaacccgagtacgccaccatcaagcaagaggtggagaac
ttcaaaaaggttcacctgatcagccgagaggagtttgactgcctgaccccagaacccccc
gtcgaccccaaccaggaggtgccccctggacccccaaagccccagcagattcccgtagac
gccttggcgaacaaactgttcggtgcccctgagccttccacgatagcacgctccctcccg
actactgtacctgactcgcccaactaccgcagtgcccggacaccccgcacgcctcgcacc
ccgcaccggaaggacctcgccatgacgccccgtttctaccctgttgtgaaggagagccgg
cccgtcgacgccaagacccccaggaaaaggaagaccaggcacagctccaacccccccatg
gagtgccacgttggctgggtgatggactcgcgggagcaccgatctcgcaccgcctccgtc
agctccaacgccagcccctcagagggtacacctgcattggggggaattggctgcactccc
cagtcgctccccaatttccagcacccctcccacgagctgctcaaggagaacggcttcaca
caacacgtttatcacaagtaccgtcgacgctgcctaaacgaacgcaagcggttgggcatc
ggccaatcccaggagatgaacacgctgttccgtttctggtcgtttttcctgagggatcac
ttcaacaggaagatgtatgaggagttcagacagctggtggtggaggacggcaaggaggga
tacaggtacggtttggagtgcctgttcaggtactacagctacggactggaaaggaaattc
aggccaaacattttcaaggacttccaggaggagaccatgaaagattacgaagctggccag
ctgtatggacttgaaaagttttgggcatttcttaaatactccaaaaacaagaacatgggg
atcgaccccaagttgcaggagtgcttgagcaagtttaagcgtctcgaggatttcagaatc
gatcccccgatggaggagggaggtcgcaagagacactcatccagcggagactgtcgccgc
cgccacccctcccagggctccagccgcccccacagccaaactggcttcggccccgttcgc
ccagggccccaccagggaggatgccaaaatcagcagccagagccagcgccccgcagccca
gacggggcgctgccaccaaagtaa

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