Oncorhynchus mykiss (rainbow trout): 110491178
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Entry
110491178 CDS
T07259
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110491178
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110491178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110491178
NCBI-ProteinID:
XP_036803659
LinkDB
All DBs
Position
16:73324102..73660890
Genome browser
AA seq
1575 aa
AA seq
DB search
MTADKDKPDREKDRDRDRDRERDRERDRDRDKRDKASRESESSRPRRSCTLEGGAKNYAE
SEDEDNENRGGAGAVGGINMGMGEESGKKGKKKMIKKKSRYERMENGEITSFITEDDVVY
RPGDCVYMESRRPNTPYFICSIQDFKLSKRDHLLLSVKWYYRQSEVPDSVYQHLVQDRNN
ENDSGRELVITDPVVRGRELFISDYVDTYHAAALRGKCNIAHFSDIFAAREFKARIDSFF
YILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSEAPGVLTQAVTENEELVWMPGVN
DCDLLMYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESCYDAGKALQRL
VKKPVPKLIEKCWSEDEVKRFIKGLRQYGKNFFKIRKELLPNKETGELITFYYYWKKTPE
AASSRAHRRHRRQPVFRRIKTRTASTPVNIPSRPPSSEFLDLSSASEDDLDSEDSEQELK
GYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEDE
DGLSGKHSMKTRRNRGSMSTLRSGRKKQTASPDGRVSPTNEDLRSSGRTSPSAASTDSTD
SKTDPMKKPSKKIKEESPMKCAKRQREKGGASDTEDTDNRTIAKKSKTQELGRSDSPSEC
EGEGEGEGESSDGHSVNEECSSDAKDIDQDNRSSSPSIPSPRDGESDSDSSAQQQLLLLQ
RRERERDREGQSQHPPVIQSCQPGTSGGRSTTPPLPPTSSTAPSLVPQVSSPSAPPTFLP
LPLPPPMPQQAGPLSLNQSGVSIHPQRRPSPSPHSPLQGMSQAPPPGPQSLPSALHGPQP
HPSSIPHPLQVGPSHLPHLPHSLPPQSQVPPSPLPLGQLQQPPHRVHTPPSQSLSQGVSS
NQLPREQLLPHAPSMSMPHIKPPPTTPIPHMPNRDPQSHKHGPPHLSAPPFPQMPSNLPP
PPALKPLSSLSAHHPPPAHPPPLQLMPQGPGQQLQPPPAQPPVLTQSQNLPLSERERGNQ
HPPPLPLSGPSQSSHPNTPQQPPFPPHPFNPVLPPSSAGCPPSSSSLPPGLQPPSSFSMP
ITAPVGSACTGPAVPPVHIKEEPLDESEEPESPPPPPRSPSPEPTIVNTPSHASQSARFY
KHLDRGYNTCARTDFYFTPLAASKLAKKREEALERVKREAEQKAREEKEREREKERERER
EREKEQERAAKASSSCHDSRMGDPQMGGSAHMRPPFDGPPTSIAAVPPYIGPDTPALRTL
SEYARPHVMSPTNRNHPFFVSLNPNDPLMAYHMPGLYNADPGMRERELREREMREREMRE
RELRERMKPGFEHKPPELEGMHPSANPMEHFARHGAISLPSMAGPHPFASFHPGLNPLER
ERLALAAGPQLRPDMSYPERLAAERLHAERMAAVANDPIARLQMFNITPHHHQHSHIHSH
LHLHQQDSLHQGGGECLVCPPGSGGHPLVDPLAGGPHLARFPYPHGTIPNSLLGQNPHEH
EMLRHPVFGTPYPRDLPPQMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHMHGGPLPGQ
EDYYSRLKKESDKQL
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggacaaagacaagccagacagagagaaggacagggacagagaccgagacagg
gagagggacagagagagggacagagaccgggacaagagggacaaagcgtccagggagagc
gagagctcacgaccgcgccgcagctgcacgttggagggcggagctaagaactacgccgag
agcgaggacgaggataacgagaacaggggaggtgccggggcagtaggcgggatcaacatg
gggatgggggaggagtcagggaagaagggaaagaagaagatgatcaagaagaagtcgagg
tatgaacggatggagaacggagagatcacttccttcattactgaagacgacgttgtttac
agacctggcgattgtgtatatatggagagccgcaggcccaacactccctacttcatatgt
agcattcaggattttaaactgagtaaacgagaccatctgttactcagtgttaaatggtat
tatcgtcagtcagaggtccctgactcagtctaccaacacctggtgcaggaccgcaacaat
gagaatgattctggccgggagctggtcatcacagacccagtggtcaggggcagagaactc
ttcatctccgactatgtggacacataccatgctgctgccctcagggggaagtgtaacatt
gcccatttctcagacatcttcgctgccagggagttcaaagctcgcatcgactcctttttc
tacatcctgggatacaacccagagaccaggcgactaaacagcacacagggggagatcaga
gtggggcccagtcaccaagccaagcttcctgagttgcagcccttcccctccgaggccccg
ggggtcctgactcaggctgtaacagagaatgaggagctagtgtggatgccaggggtcaac
gactgtgacctgctcatgtacctcagggctgcaaggagcatggcggccttcgctgggatg
tgtgacggaggttctacagaggacggttgcctagcagcctcgcgagacgacaccacactc
aacgcactcaacacgctccacgagagctgttacgatgcaggcaaggccctacagcgactg
gtgaagaaacctgttcccaaactcatagagaagtgctggtcggaggacgaagtgaagcgg
ttcattaaagggctcagacagtacggcaagaacttctttaagattcggaaagagctgcta
cccaacaaggaaacgggtgagttgataaccttctactactactggaagaagactcctgag
gcagcgtcgtccagggcccaccgtagacaccgtcgccagcctgtgttccgacgcatcaag
acacgcaccgcctccacccccgtcaacatcccgtctagacccccctcctcagagttctta
gacctgagttcagccagtgaagatgacctggacagtgaagacagtgagcaggagctgaag
ggttacgcctgcagacactgtttcaccaccacctctaaggactggcaccacgggggcaga
gagaacatcttgttgtgtacagactgtcgtatccactttaagaagtacggcgagctgccc
cccatcgagaagcccgtggacccgcctccgtttatgttcaaacccgtcaaagaggatgag
gatggactcagcggcaagcatagcatgaagacccgacgcaacagaggatcgatgtcgacg
ctccgtagtggccgtaagaagcagacagccagccctgatggacgagtgtctccaaccaat
gaggacctccggtctagtggccgtacctccccctctgcagcctccacagacagcactgac
agcaagacagaccccatgaagaaacccagcaagaagatcaaggaggagtctcctatgaag
tgtgccaaacgccaacgagagaaaggaggagcctcagacaccgaggacacggacaacagg
accatcgcaaaaaagtccaagacccaggagctgggtcggtccgactcgccgtcagaatgc
gagggagagggagagggcgagggagagagctccgatggccacagcgtcaacgaggagtgt
agcagtgacgctaaagacatcgaccaggataaccgcagctcctcgccctccatccccagc
ccccgagacggggagagtgactcggactcctccgcccagcagcagctgctcctactgcag
aggagggagagagagagagatagggagggacagtcgcagcaccctccggttatccagtcc
tgtcagccagggacctccggtggtcgctccaccaccccgccattacctcccacgtcctcc
acagccccctcactggtcccccaggtgtcctctccctccgcaccccccactttccttcca
ctgccgctaccgcctcccatgccccaacaggccggccccctctctctcaaccaatcaggg
gtgtccatccacccccagaggcggccctctccctcgcctcattctccgctgcaggggatg
tctcaggctccacccccaggaccccagtcgctacctagcgcgctccacggcccacagccc
cacccatcatccattccccacccacttcaggttggcccctcccacctgccccacctgccc
cactccctccccccccagtctcaggtcccgccctccccactgcctctcggccaattgcag
caaccgccccacagggtccacacgcctcccagccaatcgttgtcccagggtgtatcgtcc
aatcaactgccccgtgagcagctcctaccccatgccccctccatgtctatgccccacatc
aagccccctcccaccacccccatcccccacatgcccaaccgcgacccccagtctcacaaa
cacggccctccacacctctcagcgccccccttcccccagatgccctccaacctgccccct
ccgcccgccctcaaacccctttcctccctgtccgcccaccaccctcccccagcccaccct
cctcccctccagctcatgcctcagggccctggccagcagctccagcccccaccagcccag
ccccctgtcctcacccagtcccagaatctccccctttcagagagagagagaggcaaccag
cacccccctcctctacctctctctggaccatcgcaatcctcccaccccaacacaccccaa
cagcccccgttccctcctcaccccttcaaccctgtcctgcccccctcctccgctggctgc
cctccctcgtcctcgtctctaccaccaggcctccagcccccctcctccttctccatgccc
atcaccgcccccgtcggctccgcctgcacaggtcctgccgtcccgcctgtacacatcaag
gaggaaccgcttgacgaatcagaggagcccgagagccctccgccccctcctcggagcccc
tcccccgagccaaccatcgtcaacacgcccagccatgccagccaatcagcacggttttac
aagcacctggaccgtgggtacaacacgtgtgccagaacagacttctacttcactcctctg
gctgcttctaaactggccaagaagagagaagaggcgctggagcgggtcaagagggaggcg
gagcagaaagcccgggaggagaaggagagggagagggagaaggaacgagagagggaacgg
gaaagagagaaggaacaggagagagctgcgaaagcctccagttcgtgtcatgacagtcgt
atgggtgacccccagatgggtggctccgcccacatgcgtcctcccttcgacggcccccct
acctccatcgccgcggtgcccccttacatcggccccgacacgcccgccctgcgcaccctc
agcgagtacgcccgcccccacgtcatgtccccgaccaataggaaccaccccttcttcgtc
tccctcaaccccaacgaccccctgatggcctatcacatgcctggcctctacaacgccgac
ccgggcatgcgggagcgcgagctgcgagagcgggagatgagggagagggagatgagggag
agggagctgagagagaggatgaagcctgggttcgaacacaaacccccggagctagaaggc
atgcacccctcggcgaaccccatggagcactttgcccgacacggggccatctccttacct
tccatggcgggaccacaccccttcgcctccttccacccaggtctcaaccccttggagagg
gagcgtttggcgttggccgcgggaccccagctcagaccagacatgagctacccggagcgg
ctggcggcggagaggctgcacgccgagaggatggcggcggtggccaacgaccctatcgcc
aggcttcagatgttcaacatcacgcctcatcaccaccagcactcccacatccactcacac
ctgcaccttcaccagcaggactccctgcaccaaggcggtggtgaatgtcttgtgtgccct
ccaggttcgggggggcaccccctcgtagaccccctggcaggaggcccccacctcgcccgc
ttcccttacccgcacggcacaatccccaactccctcctgggacagaacccacacgaacat
gagatgctgcgacaccccgtcttcggtactccgtacccccgggaccttcctccccagatg
tccgcagcccaccagctccaggccatgcatgcccagtctgcagagctgcagcggctagct
atggaacagcagtggctgcatggtcatcaccacatgcacggtggcccacttcctggccaa
gaggactattacagccgcctgaagaaggaaagcgacaagcaactgtaa
DBGET
integrated database retrieval system
